CK935731

Overview
NameCK935731
Unique NameCK935731
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_THEEB (Protein grpE OS=Thermosynechococcus elongatus (strain BP-1) GN=grpE PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.702e-23
Identity = 63/160 (39.38%), Postives = 91/160 (56.88%), Query Frame = 3
Query:  417 IEAYKEAVSNGDEKAVSDIEARIFVVQNEKNELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            +E   EA    +++A     A    +  +   L    +SLS  +     +  RL ADFEN RKR+++E+  +    +  VI  LL +VDSFE AR  I+ ETE E+KI  SYQG+YKQ VE ++ +  +A+   GKPFDP +HEA+ RE + E  EG +I
Sbjct:   51 VENPAEATPGEEDQASEATSANAADLLEQIAALEAAKASLSQVVEERNSQYIRLAADFENFRKRTQREKEELELQIKCSVIADLLPVVDSFELARTHIQTETEAEEKIHRSYQGVYKQLVECLKRIGVSAMQAKGKPFDPNLHEAVLREATNEHPEGTVI 210          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_PROMS (Protein grpE OS=Prochlorococcus marinus (strain AS9601) GN=grpE PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.441e-22
Identity = 62/192 (32.29%), Postives = 106/192 (55.21%), Query Frame = 3
Query:  330 INNKEG-FHDGEQASGSEADQKHLLNLKTLIEAYKEAVSNGDE--KAVSDIEARIFVVQNEKNELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            I+NKE    D + A  + +  + L      + + K    N +E   ++S+ +AR+  ++ E   L              K +  R+ ADF+N RKR  +++  ++     + +  +L +VD+FERAR Q+KPE+E+ + +  SYQG+YKQ VE+++    + +  VG+ FDP++HEA+ RE SE+F E  II
Sbjct:    9 IDNKENDLSDQDNALENVSSAQELTTENNELSSQKTEEINTEELKNSISNNDARLEQLEKEHETL--------------KNQYVRISADFDNFRKRQSRDQDDLKIQLVSKTLTAILPIVDNFERARQQLKPESEEAQSLHRSYQGLYKQLVEVLKQQGVSPMRVVGQQFDPSLHEAVLREPSEKFEEDFII 186          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_PROMP (Protein grpE OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=grpE PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.441e-22
Identity = 53/152 (34.87%), Postives = 92/152 (60.53%), Query Frame = 3
Query:  450 DEKAVSDIEARIFVVQNEKNELLR---KVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            ++K   +++      ++ KN +     ++  L  E  + K +  R+ ADF+N RKR  +++  ++     + +  +L +VD+FERAR Q+KPE+E+ + +  SYQG+YKQ VE+++    + +  V + FDP +HEA+ RE S+EFNE III
Sbjct:   35 EDKQTLEVDDENIYAEDLKNTITNNDARLEQLEKEHETLKSQYVRIAADFDNFRKRQSRDQDDLKVQLVSKALTAILPIVDNFERARQQLKPESEEAQTLHRSYQGLYKQLVEVLKQQGVSPMRVVAQQFDPKLHEAVLREPSQEFNEDIII 186          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_ANASP (Protein grpE OS=Anabaena sp. (strain PCC 7120) GN=grpE PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.441e-22
Identity = 52/129 (40.31%), Postives = 82/129 (63.57%), Query Frame = 3
Query:  510 ELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            EL +++SSL  ++     +  R+ ADFEN RKR++KE+  +    +   I  LL +VD+FERAR  +KP+TE E  I  SYQG+YKQ V+ ++ +  + +   G+ FDP +HEA+ RE ++E  EG ++
Sbjct:   79 ELTQQISSLKTQLDERSTQYMRIAADFENYRKRTQKEKEELDLQVKRNTILELLPIVDNFERARSHLKPQTESEMTIHKSYQGVYKQLVDSLKRLGVSPMRPEGQEFDPNLHEAVMREPTDEHPEGTVL 207          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_PROM5 (Protein grpE OS=Prochlorococcus marinus (strain MIT 9515) GN=grpE PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.457e-22
Identity = 59/158 (37.34%), Postives = 94/158 (59.49%), Query Frame = 3
Query:  432 EAVSNGDEKAVSDIEARIFVVQNEKNELLR---KVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            E  +N D+K   D   +I   ++ KN +     ++  L  E  + K +  R+ ADF+N RKR  +++  ++     + +  +L +VD+FERAR Q+KPE ++ + +  SYQG+YKQ VE+++    A +  VG+ FDP +HEA+ RE SEE NE III
Sbjct:   30 EEQTNEDKKLPDDNNEKIDA-EDLKNTITNNDARLEQLEKEHETLKSQYVRIAADFDNFRKRQSRDQDDLKIQLVSKALTAILPIVDNFERARQQLKPEGDEAQTLHRSYQGLYKQLVEVLKQQGVAPMRVVGQQFDPNLHEAVLREPSEEQNEDIII 186          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_PROM9 (Protein grpE OS=Prochlorococcus marinus (strain MIT 9312) GN=grpE PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.209e-22
Identity = 58/181 (32.04%), Postives = 100/181 (55.25%), Query Frame = 3
Query:  354 DGEQASGSEADQKHLLNLKTLIEAYKEAVSNGDEKAVSDIEARIFVVQNEKNELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            D      S A +K + N +   +  +E  +   +  +S+ +AR+  ++ E   L              K +  R+ ADF+N RKR  +++  ++     + +  +L +VD+FERAR Q+KPE+E+ + +  SYQG+YKQ VE+++    + +  VG+ FDP +HEA+ RE SEEF E +I+
Sbjct:   20 DNAPEDNSSAAEKTIENDELSPQKTEEINTEELKNTISNNDARLEQLEKEHETL--------------KNQYVRISADFDNFRKRQSRDQDDLKVQLVSKTLTAILPIVDNFERARQQLKPESEEAQALHRSYQGLYKQLVEVLKQQGVSPMRVVGQQFDPNLHEAVLREPSEEFKEDLIV 186          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_ANAVT (Protein grpE OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=grpE PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.209e-22
Identity = 51/129 (39.53%), Postives = 82/129 (63.57%), Query Frame = 3
Query:  510 ELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            EL ++++SL  ++     +  R+ ADFEN RKR++KE+  +    +   I  LL +VD+FERAR  +KP+TE E  I  SYQG+YKQ V+ ++ +  + +   G+ FDP +HEA+ RE ++E  EG ++
Sbjct:   79 ELTQQINSLKTQLDERSTQYMRIAADFENYRKRTQKEKEELDLQVKRNTILELLPIVDNFERARSHLKPQTESEMTIHKSYQGVYKQLVDSLKRLGVSPMRPEGQEFDPNLHEAVMREPTDEHPEGTVL 207          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_CYAP7 (Protein grpE OS=Cyanothece sp. (strain PCC 7424) GN=grpE PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.191e-22
Identity = 62/190 (32.63%), Postives = 104/190 (54.74%), Query Frame = 3
Query:  348 FHDGEQASGSEADQKHLLNLKTLIEAYKEAVSNGDEKAVSDIEARIFVVQNEKNELLRKVSSL-------SAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            F + E    S+  +K L  L   I + +E      ++ +  ++  +  +  +   LL+   SL       + +I + K +   L A+F+N RKR+ +E+  +   A+ + +  LL +VD+FERARLQIKP  E E +I  SYQG+YK  V+ ++ +  +A+   G+PFDP  HEA+ RE + +F EG +I
Sbjct:   55 FVESELLQDSQGIEKLLATLAEQIGSTQEG-----QEILGQLQPLLTNLIQQNESLLQTNQSLKDQLEEQNQQIDAAKRRYIGLAAEFDNFRKRTLREKEELEKQAKRKTLSELLTVVDNFERARLQIKPSNEGEGEIHKSYQGVYKNLVDSLKRLGVSAMRAEGEPFDPMYHEAMLREPTNDFPEGTVI 239          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_SYNE7 (Protein grpE OS=Synechococcus elongatus (strain PCC 7942) GN=grpE PE=3 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 5.474e-22
Identity = 60/161 (37.27%), Postives = 99/161 (61.49%), Query Frame = 3
Query:  438 VSNGDE-KAVSDIEARIFVVQNEKNELLRKVSSLSA-------EITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            V+NGD  +AVS+ +  +   Q E  EL  +++ ++A       E+        RL ADFEN R+R+ KER  +   ++   I  LL ++D+F+RAR QIKP+ E+ + I  SYQG+YKQ V+ ++ +  + +   G+PFDP++H+A+ REE+ E  +GI++
Sbjct:   14 VANGDSAEAVSEPDVTVASGQ-EAAELAAQLALVAADRDRLKTELDEQNSAYLRLAADFENFRRRTLKEREELELQSKRTTITELLPVIDNFDRARAQIKPQGEEAEAIHKSYQGLYKQLVDCLKRIGVSPMRAEGQPFDPSLHDAVLREETTEHPDGIVL 173          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_PROM0 (Protein grpE OS=Prochlorococcus marinus (strain MIT 9301) GN=grpE PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.474e-22
Identity = 50/125 (40.00%), Postives = 80/125 (64.00%), Query Frame = 3
Query:  522 KVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            ++  L  E  + K +  R+ ADF+N RKR  +++  ++     + +  +L +VD+FERAR Q+KPE+E+ + +  SYQG+YKQ VE+++    + +  VG+ FDP +HEA+ RE SEEF E  II
Sbjct:   62 RLEQLEKEHETLKNQYVRISADFDNFRKRQSRDQDDLKIQLVSKTLTAILPIVDNFERARQQLKPESEEAQALHRSYQGLYKQLVEVLKQQGVSPMRVVGQQFDPNLHEAVLREPSEEFEEDFII 186          
The following BLAST results are available for this feature:
BLAST of CK935731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
GRPE_THEEB1.702e-2339.38Protein grpE OS=Thermosynechococcus elongatus (str... [more]
GRPE_PROMS1.441e-2232.29Protein grpE OS=Prochlorococcus marinus (strain AS... [more]
GRPE_PROMP1.441e-2234.87Protein grpE OS=Prochlorococcus marinus subsp. pas... [more]
GRPE_ANASP1.441e-2240.31Protein grpE OS=Anabaena sp. (strain PCC 7120) GN=... [more]
GRPE_PROM52.457e-2237.34Protein grpE OS=Prochlorococcus marinus (strain MI... [more]
GRPE_PROM93.209e-2232.04Protein grpE OS=Prochlorococcus marinus (strain MI... [more]
GRPE_ANAVT3.209e-2239.53Protein grpE OS=Anabaena variabilis (strain ATCC 2... [more]
GRPE_CYAP74.191e-2232.63Protein grpE OS=Cyanothece sp. (strain PCC 7424) G... [more]
GRPE_SYNE75.474e-2237.27Protein grpE OS=Synechococcus elongatus (strain PC... [more]
GRPE_PROM05.474e-2240.00Protein grpE OS=Prochlorococcus marinus (strain MI... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_C09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935731 ID=CK935731; Name=CK935731; organism=Citrus sinensis; type=EST; length=897bp
GCCGGGGGGAAGGCAGCACCCAGCTGNNNAGCGAAAACCCTTTGGTGTGA
ATATTGAAAACATAATAAAAGCTAAATTGAGGAAGAGAAAACAGCTCTTG
ACTAAAAGAGTAGGCGTTAATAAATTATCCATCAGTCGAAGTCAATCGAA
TGGCTGTTGCGCTCTCAAACCACTCCTTCTTAGCTTCTCCGCGCCTTTCT
TCTTCTGCTTCTCTGTATAGACACAGAAAAACCCTAGCCCTTCGCTCTTT
CAATCGGAGACCTCCTCTCTTAAACCTAGAACTTCCCCTTCACAACAATA
CCGGGCCTGGCTTCAAGTCTTTCTTCGCTATAAATAACAAGGAGGGTTTC
CATGATGGTGAACAAGCCTCTGGAAGTGAAGCAGATCAGAAACATCTGTT
GAATCTGAAGACGTTGATTGAAGCCTACAAGGAGGCTGTGTCTAATGGAG
ATGAAAAGGCTGTATCTGATATTGAAGCTCGAATTTTTGTAGTACAAAAT
GAGAAGAATGAATTGTTACGCAAAGTTTCCTCACTATCAGCGGAGATAAC
CTCTGGGAAGGAGAAATGCACCCGCTTGCAAGCAGATTTTGAAAATTCTA
GGAAGAGATCAGAGAAGGAGAGGCTGGCTGTAAGGTCTGATGCCCAGGGC
GAAGTGATTGAGAGACTTTTGCTTTTGGTGGACAGTTTTGAGAGAGCGAG
ACTGCAAATCAAACCAGAGACAGAAAAGGAGAAAAAGATAGATACAAGTT
ATCAAGGTATATATAAGCAATTTGTGGAGATCATGAGGAGCATGCAAGCA
GCTGCAGTGCCAACTGTGGGAAAACCTTTTGATCCCGCGGTGCATGAGGC
CATTGCACGAGAGGAATCTGAAGAGTTCAATGAAGGGATTATTATTG
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