CK935731
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_THEEB (Protein grpE OS=Thermosynechococcus elongatus (strain BP-1) GN=grpE PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.702e-23 Identity = 63/160 (39.38%), Postives = 91/160 (56.88%), Query Frame = 3 Query: 417 IEAYKEAVSNGDEKAVSDIEARIFVVQNEKNELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896 +E EA +++A A + + L +SLS + + RL ADFEN RKR+++E+ + + VI LL +VDSFE AR I+ ETE E+KI SYQG+YKQ VE ++ + +A+ GKPFDP +HEA+ RE + E EG +I Sbjct: 51 VENPAEATPGEEDQASEATSANAADLLEQIAALEAAKASLSQVVEERNSQYIRLAADFENFRKRTQREKEELELQIKCSVIADLLPVVDSFELARTHIQTETEAEEKIHRSYQGVYKQLVECLKRIGVSAMQAKGKPFDPNLHEAVLREATNEHPEGTVI 210
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_PROMS (Protein grpE OS=Prochlorococcus marinus (strain AS9601) GN=grpE PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.441e-22 Identity = 62/192 (32.29%), Postives = 106/192 (55.21%), Query Frame = 3 Query: 330 INNKEG-FHDGEQASGSEADQKHLLNLKTLIEAYKEAVSNGDE--KAVSDIEARIFVVQNEKNELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896 I+NKE D + A + + + L + + K N +E ++S+ +AR+ ++ E L K + R+ ADF+N RKR +++ ++ + + +L +VD+FERAR Q+KPE+E+ + + SYQG+YKQ VE+++ + + VG+ FDP++HEA+ RE SE+F E II Sbjct: 9 IDNKENDLSDQDNALENVSSAQELTTENNELSSQKTEEINTEELKNSISNNDARLEQLEKEHETL--------------KNQYVRISADFDNFRKRQSRDQDDLKIQLVSKTLTAILPIVDNFERARQQLKPESEEAQSLHRSYQGLYKQLVEVLKQQGVSPMRVVGQQFDPSLHEAVLREPSEKFEEDFII 186
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_PROMP (Protein grpE OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=grpE PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.441e-22 Identity = 53/152 (34.87%), Postives = 92/152 (60.53%), Query Frame = 3 Query: 450 DEKAVSDIEARIFVVQNEKNELLR---KVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896 ++K +++ ++ KN + ++ L E + K + R+ ADF+N RKR +++ ++ + + +L +VD+FERAR Q+KPE+E+ + + SYQG+YKQ VE+++ + + V + FDP +HEA+ RE S+EFNE III Sbjct: 35 EDKQTLEVDDENIYAEDLKNTITNNDARLEQLEKEHETLKSQYVRIAADFDNFRKRQSRDQDDLKVQLVSKALTAILPIVDNFERARQQLKPESEEAQTLHRSYQGLYKQLVEVLKQQGVSPMRVVAQQFDPKLHEAVLREPSQEFNEDIII 186
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_ANASP (Protein grpE OS=Anabaena sp. (strain PCC 7120) GN=grpE PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.441e-22 Identity = 52/129 (40.31%), Postives = 82/129 (63.57%), Query Frame = 3 Query: 510 ELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896 EL +++SSL ++ + R+ ADFEN RKR++KE+ + + I LL +VD+FERAR +KP+TE E I SYQG+YKQ V+ ++ + + + G+ FDP +HEA+ RE ++E EG ++ Sbjct: 79 ELTQQISSLKTQLDERSTQYMRIAADFENYRKRTQKEKEELDLQVKRNTILELLPIVDNFERARSHLKPQTESEMTIHKSYQGVYKQLVDSLKRLGVSPMRPEGQEFDPNLHEAVMREPTDEHPEGTVL 207
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_PROM5 (Protein grpE OS=Prochlorococcus marinus (strain MIT 9515) GN=grpE PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.457e-22 Identity = 59/158 (37.34%), Postives = 94/158 (59.49%), Query Frame = 3 Query: 432 EAVSNGDEKAVSDIEARIFVVQNEKNELLR---KVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896 E +N D+K D +I ++ KN + ++ L E + K + R+ ADF+N RKR +++ ++ + + +L +VD+FERAR Q+KPE ++ + + SYQG+YKQ VE+++ A + VG+ FDP +HEA+ RE SEE NE III Sbjct: 30 EEQTNEDKKLPDDNNEKIDA-EDLKNTITNNDARLEQLEKEHETLKSQYVRIAADFDNFRKRQSRDQDDLKIQLVSKALTAILPIVDNFERARQQLKPEGDEAQTLHRSYQGLYKQLVEVLKQQGVAPMRVVGQQFDPNLHEAVLREPSEEQNEDIII 186
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_PROM9 (Protein grpE OS=Prochlorococcus marinus (strain MIT 9312) GN=grpE PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.209e-22 Identity = 58/181 (32.04%), Postives = 100/181 (55.25%), Query Frame = 3 Query: 354 DGEQASGSEADQKHLLNLKTLIEAYKEAVSNGDEKAVSDIEARIFVVQNEKNELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896 D S A +K + N + + +E + + +S+ +AR+ ++ E L K + R+ ADF+N RKR +++ ++ + + +L +VD+FERAR Q+KPE+E+ + + SYQG+YKQ VE+++ + + VG+ FDP +HEA+ RE SEEF E +I+ Sbjct: 20 DNAPEDNSSAAEKTIENDELSPQKTEEINTEELKNTISNNDARLEQLEKEHETL--------------KNQYVRISADFDNFRKRQSRDQDDLKVQLVSKTLTAILPIVDNFERARQQLKPESEEAQALHRSYQGLYKQLVEVLKQQGVSPMRVVGQQFDPNLHEAVLREPSEEFKEDLIV 186
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_ANAVT (Protein grpE OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=grpE PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.209e-22 Identity = 51/129 (39.53%), Postives = 82/129 (63.57%), Query Frame = 3 Query: 510 ELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896 EL ++++SL ++ + R+ ADFEN RKR++KE+ + + I LL +VD+FERAR +KP+TE E I SYQG+YKQ V+ ++ + + + G+ FDP +HEA+ RE ++E EG ++ Sbjct: 79 ELTQQINSLKTQLDERSTQYMRIAADFENYRKRTQKEKEELDLQVKRNTILELLPIVDNFERARSHLKPQTESEMTIHKSYQGVYKQLVDSLKRLGVSPMRPEGQEFDPNLHEAVMREPTDEHPEGTVL 207
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_CYAP7 (Protein grpE OS=Cyanothece sp. (strain PCC 7424) GN=grpE PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.191e-22 Identity = 62/190 (32.63%), Postives = 104/190 (54.74%), Query Frame = 3 Query: 348 FHDGEQASGSEADQKHLLNLKTLIEAYKEAVSNGDEKAVSDIEARIFVVQNEKNELLRKVSSL-------SAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896 F + E S+ +K L L I + +E ++ + ++ + + + LL+ SL + +I + K + L A+F+N RKR+ +E+ + A+ + + LL +VD+FERARLQIKP E E +I SYQG+YK V+ ++ + +A+ G+PFDP HEA+ RE + +F EG +I Sbjct: 55 FVESELLQDSQGIEKLLATLAEQIGSTQEG-----QEILGQLQPLLTNLIQQNESLLQTNQSLKDQLEEQNQQIDAAKRRYIGLAAEFDNFRKRTLREKEELEKQAKRKTLSELLTVVDNFERARLQIKPSNEGEGEIHKSYQGVYKNLVDSLKRLGVSAMRAEGEPFDPMYHEAMLREPTNDFPEGTVI 239
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_SYNE7 (Protein grpE OS=Synechococcus elongatus (strain PCC 7942) GN=grpE PE=3 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 5.474e-22 Identity = 60/161 (37.27%), Postives = 99/161 (61.49%), Query Frame = 3 Query: 438 VSNGDE-KAVSDIEARIFVVQNEKNELLRKVSSLSA-------EITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896 V+NGD +AVS+ + + Q E EL +++ ++A E+ RL ADFEN R+R+ KER + ++ I LL ++D+F+RAR QIKP+ E+ + I SYQG+YKQ V+ ++ + + + G+PFDP++H+A+ REE+ E +GI++ Sbjct: 14 VANGDSAEAVSEPDVTVASGQ-EAAELAAQLALVAADRDRLKTELDEQNSAYLRLAADFENFRRRTLKEREELELQSKRTTITELLPVIDNFDRARAQIKPQGEEAEAIHKSYQGLYKQLVDCLKRIGVSPMRAEGQPFDPSLHDAVLREETTEHPDGIVL 173
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_PROM0 (Protein grpE OS=Prochlorococcus marinus (strain MIT 9301) GN=grpE PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.474e-22 Identity = 50/125 (40.00%), Postives = 80/125 (64.00%), Query Frame = 3 Query: 522 KVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896 ++ L E + K + R+ ADF+N RKR +++ ++ + + +L +VD+FERAR Q+KPE+E+ + + SYQG+YKQ VE+++ + + VG+ FDP +HEA+ RE SEEF E II Sbjct: 62 RLEQLEKEHETLKNQYVRISADFDNFRKRQSRDQDDLKIQLVSKTLTAILPIVDNFERARQQLKPESEEAQALHRSYQGLYKQLVEVLKQQGVSPMRVVGQQFDPNLHEAVLREPSEEFEEDFII 186 The following BLAST results are available for this feature:
BLAST of CK935731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935731 ID=CK935731; Name=CK935731; organism=Citrus sinensis; type=EST; length=897bpback to top |