CK935744

Overview
NameCK935744
Unique NameCK935744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6178 contig Csv1_Contig6178:3..797. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: MCFB_DICDI (Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.664e-24
Identity = 64/133 (48.12%), Postives = 80/133 (60.15%), Query Frame = 2
Query:  380 KSLVAGGVAGAVSRTAVAPLERLKILLQV------QNPHSIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760
            K L++GGVAGAVSRT  +PLERLKIL QV      QN    K  G IQ LK ++ TEGF G FKGNGTN  RI P SA++F SYE+    +L        N+   LT    L  G  AG+ ++  TYP+D++R
Sbjct:  140 KLLLSGGVAGAVSRTCTSPLERLKILNQVGHMNLEQNAPKYKGRGIIQSLKTMYTTEGFIGFFKGNGTNVIRIAPYSAIQFLSYEKYKNFLL------NNNDQTHLTTYENLFVGGAAGVTSLLCTYPLDLIR 266          
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: YP011_YEAST (Uncharacterized mitochondrial carrier YPR011C OS=Saccharomyces cerevisiae GN=YPR011C PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.098e-23
Identity = 56/126 (44.44%), Postives = 81/126 (64.29%), Query Frame = 2
Query:  383 SLVAGGVAGAVSRTAVAPLERLKILLQVQNPHSIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760
            + +AGGVAGAVSRT V+P ER+KILLQVQ+  +    G    ++ ++  EG +GLF+GNG NC RI P SAV+F  YE   K + ++   +  N   +LT   RL +GA  G  ++ ATYP+D+++
Sbjct:   25 AFLAGGVAGAVSRTVVSPFERVKILLQVQSSTTSYNRGIFSSIRQVYHEEGTKGLFRGNGLNCIRIFPYSAVQFVVYEACKKKLFHV---NGNNGQEQLTNTQRLFSGALCGGCSVVATYPLDLIK 147          
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: LEU5_YEAST (Mitochondrial carrier protein LEU5 OS=Saccharomyces cerevisiae GN=LEU5 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.247e-20
Identity = 52/133 (39.10%), Postives = 81/133 (60.90%), Query Frame = 2
Query:  374 ICKSLVAGGVAGAVSRTAVAPLERLKILLQVQNPHSIKYNGTIQGL----KYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760
            I +S +AGG++G+ ++T +APL+R+KIL Q  NPH  KY G++ GL    K+IW  +G RG F+G+     RI P +AVKF +YEQ    ++   +          +   RL +G+ AG+ ++  TYP+D+VR
Sbjct:   33 IVRSGLAGGISGSCAKTLIAPLDRIKILFQTSNPHYTKYTGSLIGLVEAAKHIWINDGVRGFFQGHSATLLRIFPYAAVKFVAYEQIRNTLIPSKEFE--------SHWRRLVSGSLAGLCSVFITYPLDLVR 157          
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: SCMC2_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus laevis GN=slc25a25 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.689e-19
Identity = 55/127 (43.31%), Postives = 77/127 (60.63%), Query Frame = 2
Query:  380 KSLVAGGVAGAVSRTAVAPLERLKILLQVQNPHSIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760
            + LVAGG AGAVSRT  APL+RLK+L+QV    S   +  + G  ++ R  GFR L++GNG N  +I P SA+KF +YEQ  + I        G+    L    R  AG+ AG+IA S+ YPM++++
Sbjct:  233 RHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMS-ILGGFTHMIREGGFRSLWRGNGINVIKIAPESAIKFMAYEQIKRII--------GSNQETLGIHERFVAGSLAGVIAQSSIYPMEVLK 350          
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: SCM2B_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-2-B OS=Danio rerio GN=slc25a25b PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 6.124e-19
Identity = 57/129 (44.19%), Postives = 78/129 (60.47%), Query Frame = 2
Query:  380 KSLVAGGVAGAVSRTAVAPLERLKILLQVQNPHSIKYN--GTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760
            + LVAGG AGAVSRT  APL+RLK+L+QV   H+ + N  G   G   + R  G R L++GNG N  +I P SA+KF +YEQ  + I        G+    L  L RL +G+ AG IA S+ YPM++++
Sbjct:  188 RHLVAGGGAGAVSRTCTAPLDRLKVLMQV---HATRSNSMGIAGGFTQMIREGGLRSLWRGNGINVLKIAPESAIKFMAYEQIKRLI--------GSNQETLGILERLVSGSLAGAIAQSSIYPMEVLK 305          
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: SCMC2_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Homo sapiens GN=SLC25A25 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.998e-19
Identity = 56/129 (43.41%), Postives = 79/129 (61.24%), Query Frame = 2
Query:  380 KSLVAGGVAGAVSRTAVAPLERLKILLQVQNPHSIKYN--GTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760
            + LVAGG AGAVSRT  APL+RLK+L+QV   H+ + N  G + G   + R  G R L++GNG N  +I P SA+KF +YEQ  + +        G++   L    RL AG+ AG IA S+ YPM++++
Sbjct:  188 RHLVAGGGAGAVSRTCTAPLDRLKVLMQV---HASRSNNMGIVGGFTQMIREGGARSLWRGNGINVLKIAPESAIKFMAYEQIKRLV--------GSDQETLRIHERLVAGSLAGAIAQSSIYPMEVLK 305          
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: YIKC_SCHPO (Uncharacterized mitochondrial carrier PB17E12.12c OS=Schizosaccharomyces pombe GN=SPAPB17E12.12c PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.045e-18
Identity = 55/126 (43.65%), Postives = 74/126 (58.73%), Query Frame = 2
Query:  383 SLVAGGVAGAVSRTAVAPLERLKILLQVQNPHSIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760
            S+++GGVA  VSRTAV+PLER+KI+ QVQN  + +Y      L  IW  EG  G F+GNGTNC R  P  AV+F ++    +  L   + H   E+ E     RL  GA AG  + + TYP+D+ R
Sbjct:   23 SMLSGGVAATVSRTAVSPLERMKIIFQVQN--NKEYTSLTSTLVKIWNREGLIGFFRGNGTNCLRAFPYGAVQFATFNMLKQRAL-KNRSHQNLENHE-----RLLFGAIAGAASCATTYPLDIAR 140          
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: SCMC2_XENTR (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus tropicalis GN=slc25a25 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.045e-18
Identity = 56/129 (43.41%), Postives = 79/129 (61.24%), Query Frame = 2
Query:  380 KSLVAGGVAGAVSRTAVAPLERLKILLQVQNPHSIKYN--GTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760
            + LVAGG AGAVSRT  APL+RLK+L+QV   H+ + N    + G   + R  G R L++GNG N  +I P SA+KF +YEQ  + I        G++   L    RL AG+ AG+IA S+ YPM++++
Sbjct:  232 RHLVAGGGAGAVSRTCTAPLDRLKVLMQV---HASRSNNMSMLGGFTQMIREGGIRSLWRGNGINVIKIAPESAIKFMAYEQMKRII--------GSDQETLGIHERLVAGSLAGVIAQSSIYPMEVLK 349          
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: SCM1B_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-1-B OS=Xenopus laevis GN=slc25a24-B PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.045e-18
Identity = 54/128 (42.19%), Postives = 79/128 (61.72%), Query Frame = 2
Query:  380 KSLVAGGVAGAVSRTAVAPLERLKILLQVQNPHSIKYNGT-IQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760
            K L+AGG+AGAVSRT  APL+RLK+++QV   H  K N   I GLK + +  G R L++GNG N  +I P +A+KF++YEQ        Y+    +E  +L    R  AG+ AG  A ++ YPM++++
Sbjct:  196 KQLMAGGMAGAVSRTGTAPLDRLKVMMQV---HGSKGNSNIITGLKQMVKEGGIRSLWRGNGVNVIKIAPETAMKFWAYEQ--------YKKLFTSESGKLGTAERFVAGSLAGATAQTSIYPMEVLK 312          
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: S2542_XENTR (Solute carrier family 25 member 42 OS=Xenopus tropicalis GN=slc25a42 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.045e-18
Identity = 58/134 (43.28%), Postives = 83/134 (61.94%), Query Frame = 2
Query:  371 SICKSLVAGGVAGAVSRTAVAPLERLKILLQV-QNPHSIKYNGTIQGLKYIWRT---EGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760
            SI  SL++G +AGAV++TAVAPL+R KI+ QV  N  S K     +  + I+RT   EGF  L++GN     R++P +A++F ++EQ  K    L   + G + + LTP+ RL AGA AG  A   TYP+D+VR
Sbjct:   35 SILNSLMSGALAGAVAKTAVAPLDRTKIIFQVSSNRFSAK-----EAYRLIYRTYLNEGFLSLWRGNSATMVRVIPYAAIQFCAHEQYKK----LLGSYYGFQGSALTPIPRLLAGALAGTTATIITYPLDLVR 159          
The following BLAST results are available for this feature:
BLAST of CK935744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
MCFB_DICDI1.664e-2448.12Mitochondrial substrate carrier family protein B O... [more]
YP011_YEAST4.098e-2344.44Uncharacterized mitochondrial carrier YPR011C OS=S... [more]
LEU5_YEAST3.247e-2039.10Mitochondrial carrier protein LEU5 OS=Saccharomyce... [more]
SCMC2_XENLA4.689e-1943.31Calcium-binding mitochondrial carrier protein SCaM... [more]
SCM2B_DANRE6.124e-1944.19Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC2_HUMAN7.998e-1943.41Calcium-binding mitochondrial carrier protein SCaM... [more]
YIKC_SCHPO1.045e-1843.65Uncharacterized mitochondrial carrier PB17E12.12c ... [more]
SCMC2_XENTR1.045e-1843.41Calcium-binding mitochondrial carrier protein SCaM... [more]
SCM1B_XENLA1.045e-1842.19Calcium-binding mitochondrial carrier protein SCaM... [more]
S2542_XENTR1.045e-1843.28Solute carrier family 25 member 42 OS=Xenopus trop... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_A08 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_A08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935744 ID=CK935744; Name=CK935744; organism=Citrus sinensis; type=EST; length=796bp
GGGGGCTTATATAGATACACAAATGATGACGTCCAAATGAGCGCACGCCG
TCACTCGCACAGAGTCACAAAAGTTGACACTCCACTTTCAGTCCTCGGAA
GCCGTCAACAAAATCTTCGTCAGTAACAGATGCAAATTATCATCGCCGCC
CGATAATCGCCGGAGATCCGACACCCGACCGATCAATTGAAAGTGCGAAA
GGACACGACTGCTTGCTGTCTGTCTTTTTCTGGTAGCCTAGGGTTTGGTA
TCATTGATGGCTTCGGAGGATGTGAAGACGAGCGAATCGGCGGTGTCGAA
GATCGTTAATCTGGCGGAAGAGGCCAAGCTTGCAGGAGAAGGCGTCAAAG
CCCCAAGCTATGCTGTTCTCAGTATTTGCAAATCTCTCGTTGCTGGAGGA
GTTGCCGGCGCAGTATCTCGCACTGCTGTTGCTCCATTGGAACGATTGAA
AATACTACTACAGGTGCAGAATCCCCACAGTATAAAATATAATGGAACGA
TTCAAGGTTTGAAATATATATGGAGAACTGAAGGATTTCGCGGACTGTTT
AAAGGCAATGGTACCAATTGCGCACGTATTGTTCCAAACTCAGCTGTCAA
ATTTTTCAGCTATGAGCAAGCTTCTAAGGGAATACTGTATCTGTATCAGC
ATCACACTGGAAATGAAGATGCTGAACTCACTCCTCTTTTACGCCTTGGA
GCTGGAGCATGTGCTGGAATAATTGCCATGTCTGCCACTTACCCCATGGA
TATGGTACGGGGGGAGGCTAACTNTTCAGACAGAAAAGTCTCCATA
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