CK935747

Overview
NameCK935747
Unique NameCK935747
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length797
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3579 contig Csv1_Contig3579:100..896. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.863e-54
Identity = 109/163 (66.87%), Postives = 123/163 (75.46%), Query Frame = 3
Query:  120 MSLIPSLFGNRRSSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQISG 608
            MSLIPS+FG RRS+VFDPFSLDVWDPF+D                  E SAFVNTRVDWKETPEAHVF+AD+PGL              LQISG+RN+EKEDK+DTWHRVERSSG F RRFRLPENAK++++KASMENGVLTVTVPK EE KK  V+AI+ISG
Sbjct:    1 MSLIPSIFGGRRSNVFDPFSLDVWDPFKDFHFPTSLS---------AENSAFVNTRVDWKETPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPENAKVEQVKASMENGVLTVTVPK-EEVKKPDVKAIEISG 153          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.706e-53
Identity = 110/163 (67.48%), Postives = 120/163 (73.62%), Query Frame = 3
Query:  120 MSLIPSLFGNRRSSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQISG 608
            MSLIPS FG RRSSVFDPFSLDVWDPF+D                  E SAFV+TRVDWKETPEAHVFKAD+PGL              LQISG+RN+EKEDK+DTWHRVERSSG   RRFRLPENAK+D++KASMENGVLTVTVPK EE KK  V+AI ISG
Sbjct:    1 MSLIPSFFGGRRSSVFDPFSLDVWDPFKDFPFPSSLS---------AENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAKVDQVKASMENGVLTVTVPK-EEIKKPDVKAIDISG 153          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.963e-53
Identity = 107/163 (65.64%), Postives = 122/163 (74.85%), Query Frame = 3
Query:  120 MSLIPSLFGNRRSSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQISG 608
            MSLIP+ FG RR++VFDPFSLDVWDPF+D                  E SAFV+TRVDWKETPEAHVFKAD+PGL              LQISG+RN+EKEDK+DTWHRVERSSG F RRFRLPENAK++++KASMENGVLTVTVPK EE KK  V+AI+ISG
Sbjct:    1 MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSASFPEFSR-ENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKVEQVKASMENGVLTVTVPK-EEVKKPDVKAIEISG 161          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.963e-53
Identity = 107/163 (65.64%), Postives = 121/163 (74.23%), Query Frame = 3
Query:  120 MSLIPSLFGNRRSSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQISG 608
            MSLIP  FG RRS+VFDPFSLD+WDPF+D                  E SAFV+TRVDWKETPEAHVFKAD+PGL              LQISG+RN+EKEDK+DTWHRVERSSG F+RRFRLPENAK++ +KASMENGVLTVTVPK EE KK  V+AI+ISG
Sbjct:    1 MSLIPGFFGGRRSNVFDPFSLDMWDPFKDFHVPTSSVS--------AENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRFRLPENAKVNEVKASMENGVLTVTVPK-EEVKKPDVKAIEISG 154          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.202e-52
Identity = 106/163 (65.03%), Postives = 119/163 (73.01%), Query Frame = 3
Query:  120 MSLIPSLFGNRRSSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQISG 608
            MSLIPS FG RRS+VFDPFSLDVWDPF+D                  E SAFV+TRVDWKETPEAHVFKADLPG+              LQISG+R++EKEDK+D WHR+ERSSG F RRFRLPENAKMD++KA+MENGVLTVTVPK EE KK  V+ I ISG
Sbjct:    1 MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNSALSASFPR----ENSAFVSTRVDWKETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPK-EEVKKPEVKTIDISG 158          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 7.167e-52
Identity = 107/163 (65.64%), Postives = 119/163 (73.01%), Query Frame = 3
Query:  120 MSLIPSLFGNRRSSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQISG 608
            MSLIPS F  RRS+VFDPFSLDVWDP +D                  E  AFV+TRVDWKETPEAHVFKADLPGL              LQISG+R++EKEDK+D WHRVERSSG F RRFRLPENAKMD++KASMENGVLTVTVPK EE KKA V++I+ISG
Sbjct:    1 MSLIPSFFSGRRSNVFDPFSLDVWDPLKDFPFSNSSPSASFPR----ENPAFVSTRVDWKETPEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFRLPENAKMDKVKASMENGVLTVTVPK-EEIKKAEVKSIEISG 158          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.723e-51
Identity = 106/164 (64.63%), Postives = 121/164 (73.78%), Query Frame = 3
Query:  120 MSLIPSLFGNRRS-SVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQISG 608
            MSLIP +FG+RRS SVFDPFS+DV+DPF++                 GE SAF NTR+DWKETPEAHVFKADLPGL              LQISG+RN+EKEDK+DTWHRVERSSG F RRFRLPENAKMD++KASMENGVLTVTVPK EE     V++I+ISG
Sbjct:    1 MSLIPRIFGDRRSTSVFDPFSIDVFDPFKELGFTVSNS---------GETSAFANTRIDWKETPEAHVFKADLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPK-EEVNNPDVKSIEISG 154          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.352e-50
Identity = 104/164 (63.41%), Postives = 121/164 (73.78%), Query Frame = 3
Query:  120 MSLIPSLFGNRRSS-VFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQISG 608
            MSLIP +FG+RRSS +FDPFS+DV+DPFR+                 GE+SAF NTR+DWKETPE HVFK DLPGL              LQISG+RN+EKEDK+D WHR+ERSSG F RRFRLPENAKMD++KASMENGVLTVTVPK EE KK  V++I+ISG
Sbjct:    1 MSLIPRIFGDRRSSSMFDPFSIDVFDPFRELGFPSTNS---------GESSAFANTRIDWKETPEPHVFKVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDKWHRMERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPK-EEVKKPEVKSIEISG 154          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HS17B_ARATH (17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana GN=HSP17.6B PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.352e-50
Identity = 104/164 (63.41%), Postives = 121/164 (73.78%), Query Frame = 3
Query:  120 MSLIPSLFGN-RRSSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQISG 608
            MS+IPS F N RRS++FDPFSLDVWDPF++                  E SA VN RVDW+ETPEAHVFKADLPGL              L+ISG+R++EKEDK+DTWHRVERSSG F+RRFRLPEN KMD++KA+MENGVLTVTVPKA E KKA V++IQISG
Sbjct:    1 MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSSSLSR----------ENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMDQVKAAMENGVLTVTVPKA-ETKKADVKSIQISG 153          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HSP15_SOYBN (17.6 kDa class I heat shock protein OS=Glycine max GN=HSP17.6-L PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.765e-50
Identity = 102/163 (62.58%), Postives = 119/163 (73.01%), Query Frame = 3
Query:  120 MSLIPSLFGNRRSSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQISG 608
            MSLIPS+FG  RS+VFDPFSLD+WDPF+D                  E SAFVNTRVDWKET EAHV KAD+PGL              LQISG+RN+EKEDK+DTWHRV+RSSG F RRFRLPENAK++++KA MENGVLTVT+PK EE KK+ V+ I+ISG
Sbjct:    1 MSLIPSIFGGPRSNVFDPFSLDMWDPFKDFHVPTSSVS--------AENSAFVNTRVDWKETQEAHVLKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVDRSSGKFMRRFRLPENAKVEQVKACMENGVLTVTIPK-EEVKKSDVKPIEISG 154          
The following BLAST results are available for this feature:
BLAST of CK935747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
HSP13_SOYBN5.863e-5466.8717.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP11_SOYBN1.706e-5367.4817.3 kDa class I heat shock protein OS=Glycine max... [more]
HSP16_SOYBN4.963e-5365.6418.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP14_SOYBN4.963e-5365.6417.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP12_MEDSA4.202e-5265.0318.2 kDa class I heat shock protein OS=Medicago sa... [more]
HSP11_PEA7.167e-5265.6418.1 kDa class I heat shock protein OS=Pisum sativ... [more]
HSP12_SOLPE2.723e-5164.6317.6 kDa class I heat shock protein OS=Solanum per... [more]
HSP11_SOLLC1.352e-5063.4117.8 kDa class I heat shock protein OS=Solanum lyc... [more]
HS17B_ARATH1.352e-5063.4117.6 kDa class I heat shock protein 2 OS=Arabidops... [more]
HSP15_SOYBN1.765e-5062.5817.6 kDa class I heat shock protein OS=Glycine max... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_A12 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935747 ID=CK935747; Name=CK935747; organism=Citrus sinensis; type=EST; length=797bp
GGGACCAGAAAGCAACTTTCCCAAAGGCACTTACTTTTTCTGCATTCGGT
GACAAGTACTTTTTATTAGTCGATAGAGGAAACAGAGAGGGAAAACAAAA
AACAGGAAAGATAAGGAAAATGTCGCTGATTCCAAGCCTCTTCGGCAACC
GACGCAGCAGTGTGTTCGATCCGTTCTCACTCGACGTTTGGGATCCATTC
AGGGACTTCCCTCTCTCTGCTTCTTCTTTTCCATCTGCGGTGTCCTCTCA
GTTCCCTGGAGAAGCCTCTGCTTTCGTTAATACCCGCGTGGACTGGAAGG
AAACCCCAGAGGCCCACGTGTTCAAGGCTGATCTTCCGGGGCTAAGGAAA
GAGGAGGTGAAGGTCGAGGTTGAGGATGATAGGGTGCTTCAGATAAGCGG
GCAGAGGAACATTGAGAAGGAAGACAAGAGCGACACGTGGCATCGCGTGG
AGCGTAGCAGTGGCATGTTCTCGAGGAGGTTCAGGCTGCCGGAGAATGCG
AAGATGGACCGCATTAAGGCTTCAATGGAGAACGGTGTGCTTACTGTTAC
CGTTCCTAAAGCGGAGGAGGCCAAGAAAGCTCATGTCAGGGCTATTCAAA
TCTCTGGCTGACTAATTAATAAACAAAGACAATAAATAATTGTATGATAA
GTTTTATGGTTTGGTTTGGTCTATGTATCATGTGAAGTCTGTCTTTGTCT
ACTGAGATCGAGTGTCTTTGTTTGTAATGGGGATGTCAGAATGGGAATAA
TAATGTAATTTCGTAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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