CK935763

Overview
NameCK935763
Unique NameCK935763
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1850 contig Csv1_Contig1850:1..821. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935763 vs. ExPASy Swiss-Prot
Match: ACOX3_ARATH (Acyl-coenzyme A oxidase 3, peroxisomal OS=Arabidopsis thaliana GN=ACX3 PE=1 SV=2)

HSP 1 Score: 358.992 bits (920), Expect = 1.834e-98
Identity = 167/244 (68.44%), Postives = 199/244 (81.56%), Query Frame = 3
Query:   96 DRAIHRTIIIKNHLLQ---PNSDQILTTNACLSYSPPELNEVYDFDLKEMRKLLDGHNLQERDWLFNLMVQSKLFNPRKRGEKVYVAPDYNQTMEQQREMTMKRISYLLERNVFEGWLTXXXXXXXXXXXXXXXVTGIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQLEING 818
            +RA+ R  ++ NH+LQ   P+S+  L+   CL YSPPELNE Y FD+KEMRKLLDGHN+ +RDW++ LM+QS LFN ++RG K++V+PDYNQTMEQQRE+TMKRI YLLE  VF+GWLT               V GI+DHS++IK+GVHFFLWG A++FFGT+RHHEKWL++TE+YVV GCFAMTELGHGSNVRGIETVTTYD  T EF+INTPCESAQKYWIGGAANHATHTIVFSQL ING
Sbjct:    4 NRALRRAHVLANHILQSNPPSSNPSLSRELCLQYSPPELNESYGFDVKEMRKLLDGHNVVDRDWIYGLMMQSNLFNRKERGGKIFVSPDYNQTMEQQREITMKRIWYLLENGVFKGWLTETGPEAELRKLALLEVCGIYDHSVSIKVGVHFFLWGNAVKFFGTKRHHEKWLKNTEDYVVKGCFAMTELGHGSNVRGIETVTTYDPKTEEFVINTPCESAQKYWIGGAANHATHTIVFSQLHING 247          
BLAST of CK935763 vs. ExPASy Swiss-Prot
Match: ACO32_ARATH (Putative acyl-coenzyme A oxidase 3.2, peroxisomal OS=Arabidopsis thaliana GN=ACX3.2 PE=3 SV=1)

HSP 1 Score: 342.813 bits (878), Expect = 1.360e-93
Identity = 158/241 (65.56%), Postives = 192/241 (79.67%), Query Frame = 3
Query:  105 IHRTIIIKNHLLQ---PNSDQILTTNACLSYSPPELNEVYDFDLKEMRKLLDGHNLQERDWLFNLMVQSKLFNPRKRGEKVYVAPDYNQTMEQQREMTMKRISYLLERNVFEGWLTXXXXXXXXXXXXXXXVTGIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQLEING 818
            + R  I+ NH+L+   P+S+  LT   C  YSPPELNE Y F++KEMRKLLDGHNL+ERDWL+ LM+QS LFNP++RG +++V+PDYNQTMEQQR+++MKRI YLLE+ VF+GWLT               V GI+D+SL+ K+GVHF LWG A++FFGT+RHHEKWL+DTE+YVV GCFAMTELGHG+NVRGIETVTTYD  T EF+INTPCESAQKYWIG AANHA H IV SQL +NG
Sbjct:    7 LRRAHILANHILRSPRPSSNPSLTPEVCFQYSPPELNESYGFEVKEMRKLLDGHNLEERDWLYGLMMQSNLFNPKQRGGQIFVSPDYNQTMEQQRQISMKRIFYLLEKGVFQGWLTETGPEAELKKFALYEVCGIYDYSLSAKLGVHFLLWGNAVKFFGTKRHHEKWLKDTEDYVVKGCFAMTELGHGTNVRGIETVTTYDPTTEEFVINTPCESAQKYWIGEAANHANHAIVISQLSMNG 247          
BLAST of CK935763 vs. ExPASy Swiss-Prot
Match: ACOX3_YARLI (Acyl-coenzyme A oxidase 3 OS=Yarrowia lipolytica GN=POX3 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.773e-27
Identity = 78/205 (38.05%), Postives = 109/205 (53.17%), Query Frame = 3
Query:  219 FDLKEMRKLLDGHNLQERDWLFNLMVQSKLFNPRKRGEKVYVAPDYNQTMEQQREMTMKRISYLLERNVFEGWLTXXXXXXXXXXXXXXXVTGIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLR----DTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQLEINGK 821
            F +K+M + L G          N+ +  +L    +R   + V+ DY+   EQ RE  + RI+ L        W                 + GI D    I++GVH  L+ GAI+  GT+  ++ W+R    D + +   GCFAMTELGHGSNV G+ET  TY  +T EFIINTP   A K+WIGGAA+ ATHT  F++L ++GK
Sbjct:   36 FPIKDMTEFLHGGEE-------NVTMIERLMTELERDPVLNVSGDYDMPKEQLRETAVARIAALSGH-----W----KKDTEKEALLRSQLHGIVDMGTRIRLGVHTGLFMGAIRGSGTKEQYDYWVRKGAADVKGFY--GCFAMTELGHGSNVAGLETTATYIQDTDEFIINTPNTGATKWWIGGAAHSATHTACFARLLVDGK 222          
BLAST of CK935763 vs. ExPASy Swiss-Prot
Match: ACOX5_CANTR (Acyl-coenzyme A oxidase 5 OS=Candida tropicalis GN=POX5 PE=3 SV=3)

HSP 1 Score: 119.013 bits (297), Expect = 3.194e-26
Identity = 79/216 (36.57%), Postives = 115/216 (53.24%), Query Frame = 3
Query:  192 PPELN---EVYDFDLKEMRKLLDGHNLQERDWLFNLMVQSKLFNPRKRGEKVYVAPDYNQTMEQQREMTMKRISYLLERNVFEGWLTXXXXXXXXXXXXXXXVTGIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDT---ENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQLEINGK 821
            P EL    E+  F+ KE+   L+G   QER  + + MV+    +P  + +  Y    YN T +QQRE+T K+I+ L     FE                   + G+FD  +  +IGV+  L+   ++  GT      W  +    +   + GCF MTEL HGSNV+GIET  T+D +T EF+INTP   A K+WIGGAA+ ATH  V+++L++ GK
Sbjct:    2 PTELQKERELTKFNPKELNYFLEGS--QERSEIISNMVEQMQKDPILKVDASY----YNLTKDQQREVTAKKIARL--SRYFE-------HEYPDQQAQRLSILGVFDPQVFTRIGVNLGLFVSCVRGNGTNSQFFYWTINKGIDKLRGIYGCFGMTELAHGSNVQGIETTATFDEDTDEFVINTPHIGATKWWIGGAAHSATHCSVYARLKVKGK 202          
BLAST of CK935763 vs. ExPASy Swiss-Prot
Match: ACOX2_YARLI (Acyl-coenzyme A oxidase 2 OS=Yarrowia lipolytica GN=POX2 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.531e-25
Identity = 74/205 (36.10%), Postives = 107/205 (52.20%), Query Frame = 3
Query:  219 FDLKEMRKLLDG--HNLQERDWLFNLMVQSKLFNPRKRGEKVYVAPDYNQTMEQQREMTMKRISYLLERNVFEGWLTXXXXXXXXXXXXXXXVTGIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYV--VLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQLEINGK 821
            F ++EM   LDG   N  + + +   + +  LFN             Y+   EQ RE+TM+R++ L   ++F                    + GI D     ++GVH+ L+ GA++  GT      W+      +    GCF+MTELGHGSN+ G+ET   YD  T EFIINTP  +A K+WIGGAA+ ATHT+VF++L + GK
Sbjct:   35 FPVREMTYFLDGGEKNTLKNEQIMEEIERDPLFNNDNY---------YDLNKEQIRELTMERVAKL---SLF------VRDQPEDDIKKRFALIGIADMGTYTRLGVHYGLFFGAVRGTGTAEQFGHWISKGAGDLRKFYGCFSMTELGHGSNLAGLETTAIYDEETDEFIINTPHIAATKWWIGGAAHTATHTVVFARLIVKGK 221          
BLAST of CK935763 vs. ExPASy Swiss-Prot
Match: ACOX_DEBHA (Acyl-coenzyme A oxidase OS=Debaryomyces hansenii GN=POX1 PE=3 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.752e-24
Identity = 74/207 (35.75%), Postives = 105/207 (50.72%), Query Frame = 3
Query:  219 FDLKEMRKLLDGHNLQERDWLFNLMVQSKLFNPRKRGEKVYVAPDYNQTMEQQREMTMKRISYL---LERNVFEGWLTXXXXXXXXXXXXXXXVTGIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYV---VLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQLEINGK 821
            FD KEM   L+G   +ER   F  M+Q    +P       Y    Y+ T +QQRE+T  RI  L   +E   F+ +                 + G+FD  L+ ++G++  L+   ++  GT    + W  D        + GCF MTEL HGSNV G+ET  T+D    EFIINTP   A K+WIGGAA+ ATH  V+++L + G+
Sbjct:   29 FDPKEMHYFLEGG--EERAEKFKQMMQQMERDPILSANFQY----YDLTKDQQRELTALRIDRLTRYIENESFDDF------------NKRMSLMGVFDPQLSTRLGINLGLFVSCLKGNGTAEQVKYWAMDKSAVYMRGIYGCFGMTELAHGSNVAGLETTATFDDENDEFIINTPHIGATKWWIGGAAHSATHCSVYARLIVGGQ 217          
BLAST of CK935763 vs. ExPASy Swiss-Prot
Match: ACOX2_CUCMA (Acyl-coenzyme A oxidase, peroxisomal OS=Cucurbita maxima GN=Acx PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.289e-24
Identity = 54/104 (51.92%), Postives = 71/104 (68.27%), Query Frame = 3
Query:  495 GIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 806
            G  D SLAIK+GV F LWGG++   GT++H +++    +N    GCFAMTEL HGSNV+G++T  T+D  T EFIINTP + A K+WIG AA H     VF++L
Sbjct:  135 GSVDVSLAIKMGVQFSLWGGSVINLGTKKHRDRFFDGIDNVDYPGCFAMTELHHGSNVQGLQTTATFDPITDEFIINTPNDGAIKWWIGNAAVHGKFATVFAKL 238          
BLAST of CK935763 vs. ExPASy Swiss-Prot
Match: ACOX4_CANMA (Acyl-coenzyme A oxidase 4 OS=Candida maltosa GN=POX4 PE=3 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 1.136e-23
Identity = 73/204 (35.78%), Postives = 104/204 (50.98%), Query Frame = 3
Query:  219 FDLKEMRKLLDGHNLQERDWLFNLMVQSKLFNPRKRGEKVYVAPDYNQTMEQQREMTMKRISYLLERNVFEGWLTXXXXXXXXXXXXXXXVTGIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVV---LGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQLEINGK 821
            FD   M   L+G   +ER  L   + Q    +P    +  Y    Y+ T +QQRE+T+ +I+ L      +   T               + G+ D  +A +IGV+  L+   I   GT    + W  D   + +    GCF MTELGHGSNV G+ET  T+D  T EF+INTP   A K+WIGGAA+ ATH  V+++L ++GK
Sbjct:   29 FDPVTMNYFLEGS--KERSELMKSLAQQIERDPILFTDGSY----YDLTKDQQRELTVLKINRLSRYREGDSVDTFNKRLS---------IMGVVDPQVATRIGVNLGLFLSCISGNGTAEQFKYWAIDKGTHNIQGLYGCFGMTELGHGSNVAGVETTATFDKETDEFVINTPHIGATKWWIGGAAHSATHCSVYARLVVDGK 217          
BLAST of CK935763 vs. ExPASy Swiss-Prot
Match: ACOX2_CANTR (Acyl-coenzyme A oxidase 2 OS=Candida tropicalis GN=POX2 PE=3 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 1.136e-23
Identity = 69/201 (34.33%), Postives = 106/201 (52.74%), Query Frame = 3
Query:  216 DFDLKEMRKLLDGHNLQERDWLFNLMVQSKLFNPRKRGEKVYVAPD-YNQTMEQQREMTMKRISYLLERNVFEGWLTXXXXXXXXXXXXXXXVTGIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVV---LGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 806
            D+DLKEM + L+G   +    L       +L+   +R   +   P+ ++ T +Q+RE+   RI+ + +    E +                 +  + D SL I++ V+  L+   ++  GTQ+  + W    E  +V    GCF MTELGHGSNV G ET  T+D  T EFII+TP   A K+WIGGAA+ ATHT+ +++L
Sbjct:   50 DWDLKEMHEFLEGDEAKSEQIL-------RLYQSIERDPILQTRPEQFDYTQKQERELVANRINQMTKFLETEPY---------GKFRRRLQLMTVIDPSLGIRMLVNIGLFLNCVRGNGTQKQFDFWSNKKEAGIVKQLYGCFGMTELGHGSNVAGCETTATFDEKTDEFIIDTPHIGATKWWIGGAAHSATHTVCYARL 234          
BLAST of CK935763 vs. ExPASy Swiss-Prot
Match: ACOX1_YARLI (Acyl-coenzyme A oxidase 1 OS=Yarrowia lipolytica GN=POX1 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.136e-23
Identity = 62/178 (34.83%), Postives = 100/178 (56.18%), Query Frame = 3
Query:  294 VQSKLFNPRKRGEKVYVAPDYNQTMEQQREMTMKRISYLLERNVFEGWLTXXXXXXXXXXXXXXXVTGIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYV--VLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQLEINGK 821
            +  K+ +  +R   + V  DY+  ++Q R+ TM+R++ L    V +                   + G+ D S   ++ +H  L+ G+I+  GT    + W++     V    GCFAMTELGHGSN++G+ET  TYD ++ +FIINTP   A K+WIGGAA+ +TH + F++L ++GK
Sbjct:   40 IVEKIMSSIERDPVLSVTADYDCNLQQARKQTMERVAALSPYLVTD---------TEKLSLWRAQLHGMVDMSTRTRLSIHNNLFIGSIRGSGTPEQFKYWVKKGAVAVKQFYGCFAMTELGHGSNLKGLETTATYDQDSDQFIINTPHIGATKWWIGGAAHTSTHCVCFAKLIVHGK 208          
The following BLAST results are available for this feature:
BLAST of CK935763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
ACOX3_ARATH1.834e-9868.44Acyl-coenzyme A oxidase 3, peroxisomal OS=Arabidop... [more]
ACO32_ARATH1.360e-9365.56Putative acyl-coenzyme A oxidase 3.2, peroxisomal ... [more]
ACOX3_YARLI3.773e-2738.05Acyl-coenzyme A oxidase 3 OS=Yarrowia lipolytica G... [more]
ACOX5_CANTR3.194e-2636.57Acyl-coenzyme A oxidase 5 OS=Candida tropicalis GN... [more]
ACOX2_YARLI3.531e-2536.10Acyl-coenzyme A oxidase 2 OS=Yarrowia lipolytica G... [more]
ACOX_DEBHA1.752e-2435.75Acyl-coenzyme A oxidase OS=Debaryomyces hansenii G... [more]
ACOX2_CUCMA2.289e-2451.92Acyl-coenzyme A oxidase, peroxisomal OS=Cucurbita ... [more]
ACOX4_CANMA1.136e-2335.78Acyl-coenzyme A oxidase 4 OS=Candida maltosa GN=PO... [more]
ACOX2_CANTR1.136e-2334.33Acyl-coenzyme A oxidase 2 OS=Candida tropicalis GN... [more]
ACOX1_YARLI1.136e-2334.83Acyl-coenzyme A oxidase 1 OS=Yarrowia lipolytica G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004390_H03 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IVF_H03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935763 ID=CK935763; Name=CK935763; organism=Citrus sinensis; type=EST; length=821bp
GGGGAGGCTGAACACTCTCCGCTTTAATTTATTTATATCATCCTCTTTGG
TTAATTTAAGAAAAAAAGGAAAAAAAATAGAAAAGAAACAAAATGGATCG
CGCCATTCACAGAACCATAATCATCAAAAATCATCTCTTACAACCAAACT
CGGATCAAATTCTCACGACAAACGCGTGTCTGAGCTATTCCCCGCCGGAA
CTCAATGAAGTTTACGATTTTGACCTCAAGGAAATGCGGAAACTACTCGA
CGGCCACAACTTGCAAGAGCGGGACTGGCTGTTCAATCTCATGGTGCAGA
GCAAGCTGTTCAATCCGAGAAAAAGAGGAGAGAAGGTCTACGTGGCGCCT
GATTACAATCAGACGATGGAGCAGCAGCGAGAGATGACGATGAAGCGAAT
CTCGTATTTGCTTGAACGCAACGTTTTTGAAGGATGGCTTACTGCCAAAG
GAGCAGAAGCCGAGTTGAGAAAATTAGCGCTGCTTGAGGTCACCGGAATA
TTCGACCACTCGTTAGCGATTAAAATCGGTGTTCACTTCTTTTTATGGGG
AGGCGCCATTCAGTTTTTCGGTACACAGCGCCACCACGAGAAGTGGCTGA
GGGACACTGAAAATTATGTGGTCTTGGGTTGCTTTGCAATGACAGAATTG
GGCCACGGAAGTAATGTTCGAGGAATTGAAACTGTCACTACATATGATGC
AAATACGGGAGAGTTTATCATCAACACCCCCTGTGAATCAGCTCAGAAGT
ATTGGATCGGTGGGGCAGCTAATCATGCAACGCATACAATCGTCTTTTCA
CAGCTCGAAATTAATGGGAAA
back to top