CK935767

Overview
NameCK935767
Unique NameCK935767
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length528
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4186 contig Csv1_Contig4186:881..1408. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK935767 vs. ExPASy Swiss-Prot
Match: Y1399_ARATH (Probable esterase At1g33990 OS=Arabidopsis thaliana GN=At1g33990 PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 3.886e-45
Identity = 85/101 (84.16%), Postives = 94/101 (93.07%), Query Frame = 1 
Query:    7 KGLYFNQSXXKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENPPEGVYKIKGSDHCPFFSKPQSLHKILVEIAQIP 309
            KGLYFNQS  KD+ALAM SMRP PLGP+MEK+SL+ E+YG GRRF++QTLDDRALSPDVQEKLVREN PEGV+KIKGSDHCPFFSKPQSLHKIL+EIAQIP
Sbjct:  248 KGLYFNQSPNKDIALAMISMRPVPLGPMMEKVSLTAERYGKGRRFYVQTLDDRALSPDVQEKLVRENSPEGVFKIKGSDHCPFFSKPQSLHKILLEIAQIP 348
The following BLAST results are available for this feature:
BLAST of CK935767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1399_ARATH3.886e-4584.16Probable esterase At1g33990 OS=Arabidopsis thalian... [more]
back to top
Properties
Property NameValue
Genbank descriptionCGF1004390_H07 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IVF_H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935767 ID=CK935767; Name=CK935767; organism=Citrus sinensis; type=EST; length=528bp
GCGGGGAAGGGGTTATATTTCAATCAATCACNNNCAAAGGATGTTGCCTT
GGCCATGGCTTCAATGAGACCCACTCCATTGGGTCCAATCATGGAGAAGC
TATCATTATCTCCAGAAAAGTATGGAACTGGCAGACGCTTCTTCATTCAG
ACACTGGATGATCGTGCCCTTTCACCAGATGTTCAAGAGAAGCTTGTTAG
AGAAAACCCACCAGAAGGAGTCTACAAGATCAAAGGAAGCGACCACTGCC
CTTTCTTCTCAAAGCCACAGTCACTACATAAAATTTTAGTTGAAATTGCT
CAAATCCCATAACTTCAATATAAAAAATGAGTAAGAATTCTTTCATCATT
ACTTTAGAAAACAAGAAGAGTTGGGTTATTACTTGTTGGATGTAGAACAT
CGACGCCAGCTTTTATGCTGTAGTTTCTTTTTCAGAATATGGGTATAGAG
GAAGTCAATGTATCATTACCTAATTTATTAATTAGTAGTAAATTAAAGCA
AAAAAAAAAAAAAAAAAAAAAAAAAAAA
back to top