CK935768

Overview
NameCK935768
Unique NameCK935768
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12395 contig Csv1_Contig12395:5..895. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935768 vs. ExPASy Swiss-Prot
Match: DCAM_CATRO (S-adenosylmethionine decarboxylase proenzyme OS=Catharanthus roseus GN=SAMDC PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.512e-48
Identity = 96/124 (77.42%), Postives = 106/124 (85.48%), Query Frame = 3
Query:  516 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQ 887
            MALP SAIGFEGYEKRLE+SFFE   FADP G+GLR+L+K Q+DEIL+PAECTIV SLSN+YLDSYVLSESSLFVYPYK+IIKTCGTTKLLLSIPAI          VR+V+YTRGSFIF GAQ
Sbjct:    1 MALPASAIGFEGYEKRLEISFFESSFFADPDGKGLRALNKSQIDEILEPAECTIVDSLSNQYLDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPAILKLAESLSLSVRNVKYTRGSFIFPGAQ 124          
BLAST of CK935768 vs. ExPASy Swiss-Prot
Match: DCAM_NICSY (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana sylvestris GN=SAMDC1 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 2.183e-47
Identity = 96/124 (77.42%), Postives = 105/124 (84.68%), Query Frame = 3
Query:  516 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQ 887
            MALPVSAIGFEG+EKRLE+SFFEPG+FADP G+GLRSLSK QLDEIL PAECTIV SLSN+ +DSYVLSESSLFVY YK+IIKTCGTTKLLL+IP I          V+ VRYTRGSFIF GAQ
Sbjct:    3 MALPVSAIGFEGFEKRLEISFFEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDSLSNDDVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILKLAETLSLKVQDVRYTRGSFIFPGAQ 126          
BLAST of CK935768 vs. ExPASy Swiss-Prot
Match: DCAM_TOBAC (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana tabacum GN=SAMDC PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 8.295e-47
Identity = 95/123 (77.24%), Postives = 104/123 (84.55%), Query Frame = 3
Query:  519 ALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQ 887
            ALPVSAIGFEG+EKRLE+SFFEPG+FADP G+GLRSLSK QLDEIL PAECTIV SLSN+ +DSYVLSESSLFVY YK+IIKTCGTTKLLL+IP I          V+ VRYTRGSFIF GAQ
Sbjct:    4 ALPVSAIGFEGFEKRLEISFFEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDSLSNDDVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILKLAETLSLKVQDVRYTRGSFIFPGAQ 126          
BLAST of CK935768 vs. ExPASy Swiss-Prot
Match: DCAM_SOLTU (S-adenosylmethionine decarboxylase proenzyme OS=Solanum tuberosum GN=SAMDC PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 8.295e-47
Identity = 94/125 (75.20%), Postives = 105/125 (84.00%), Query Frame = 3
Query:  513 KMALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQ 887
            +M LPVSAIGFEG+EKRLE+SF EPG+FADP G+GLRSLSK QLDEIL PAECTIV +LSN+Y+DSYVLSESSLFVY YK+IIKTCGTTKLLL+IP I          V+ VRYTRGSFIF GAQ
Sbjct:    2 EMDLPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDNLSNDYVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILRLAETLSLKVQDVRYTRGSFIFPGAQ 126          
BLAST of CK935768 vs. ExPASy Swiss-Prot
Match: DCAM_DATST (S-adenosylmethionine decarboxylase proenzyme OS=Datura stramonium GN=SAMDC PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.848e-46
Identity = 93/125 (74.40%), Postives = 105/125 (84.00%), Query Frame = 3
Query:  513 KMALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQ 887
            +M LPVSAIGFEG+EKRLE+SF EPG+F+DP G+GLRSLSK QLDEIL PAECTIV +LSN+Y+DSYVLSESSLFVY YK+IIKTCGTTKLLL+IP I          V+ VRYTRGSFIF GAQ
Sbjct:    2 EMDLPVSAIGFEGFEKRLEISFVEPGLFSDPNGKGLRSLSKAQLDEILGPAECTIVDNLSNDYVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILRLAETLSLKVQDVRYTRGSFIFPGAQ 126          
BLAST of CK935768 vs. ExPASy Swiss-Prot
Match: DCAM_SOLCI (S-adenosylmethionine decarboxylase proenzyme OS=Solanum chilense GN=SAMDC PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.413e-46
Identity = 93/124 (75.00%), Postives = 104/124 (83.87%), Query Frame = 3
Query:  516 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQ 887
            M LPVSAIGFEG+EKRLE+SF EPG+FADP G+GLRSL+K QLDEIL PAECTIV +LSN+Y+DSYVLSESSLFVY YK+IIKTCGTTKLLL+IP I          V+ VRYTRGSFIF GAQ
Sbjct:    1 MDLPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLTKAQLDEILGPAECTIVDNLSNDYVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILRLAETLSLKVQDVRYTRGSFIFPGAQ 124          
BLAST of CK935768 vs. ExPASy Swiss-Prot
Match: DCAM_IPONI (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea nil GN=SAMDC PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.117e-46
Identity = 93/125 (74.40%), Postives = 103/125 (82.40%), Query Frame = 3
Query:  516 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQP 890
            MAL  SAIGFEGYEKRLE+SFFE G+F+DP GRGLR+LSK QLD++LKPAECTIVSSLSN  +DSYVLSESSLFVYPYK+IIKTCGTTKLLLSIP I          V+SV+YTRGSF F   QP
Sbjct:    1 MALSTSAIGFEGYEKRLEISFFEAGIFSDPEGRGLRALSKEQLDKVLKPAECTIVSSLSNNEVDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPPILELADGLSLKVKSVKYTRGSFNFPEVQP 125          
BLAST of CK935768 vs. ExPASy Swiss-Prot
Match: DCAM_IPOBA (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea batatas GN=SAMDC PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.564e-45
Identity = 92/125 (73.60%), Postives = 102/125 (81.60%), Query Frame = 3
Query:  516 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQP 890
            MAL  SAIGFEGYE RLE+SFFE G+F+DP GRGLR+LSK QLD++LKPAECTIVSSLSN  +DSYVLSESSLFVYPYK+IIKTCGTTKLLLSIP I          V+SV+YTRGSF F   QP
Sbjct:    1 MALSTSAIGFEGYENRLEISFFEAGIFSDPEGRGLRALSKEQLDKVLKPAECTIVSSLSNNEVDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPPILELADGLSLKVKSVKYTRGSFNFPEVQP 125          
BLAST of CK935768 vs. ExPASy Swiss-Prot
Match: DCAM_PEA (S-adenosylmethionine decarboxylase proenzyme OS=Pisum sativum GN=SAMDC PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.552e-45
Identity = 93/122 (76.23%), Postives = 103/122 (84.43%), Query Frame = 3
Query:  522 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQ 887
            + VSAIGFEG+EKRLE+SF +PG+F+DP GRGLRSL+K QLDEIL PAECTIVSSL+NE +DSYVLSESSLFVY YK+IIKTCGTTKLLLSIP I          VRSVRYTRGSFIF GAQ
Sbjct:    1 MAVSAIGFEGFEKRLEISFSDPGLFSDPQGRGLRSLTKSQLDEILAPAECTIVSSLANEDVDSYVLSESSLFVYAYKLIIKTCGTTKLLLSIPPILKLADSISLNVRSVRYTRGSFIFPGAQ 122          
BLAST of CK935768 vs. ExPASy Swiss-Prot
Match: DCAM_VICFA (S-adenosylmethionine decarboxylase proenzyme OS=Vicia faba GN=SAMDC PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.324e-44
Identity = 91/122 (74.59%), Postives = 103/122 (84.43%), Query Frame = 3
Query:  522 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQ 887
            + VSAIGFEG+EKRLE+SF +PG+F+DP GRGLRSL+K QLDEIL PAECTIVSSL+NE +DSYVLSESSLFVY YK+IIKTCGTTKLLL+IP I          VR+VRYTRGSFIF GAQ
Sbjct:    1 MAVSAIGFEGFEKRLEISFSDPGLFSDPQGRGLRSLTKSQLDEILAPAECTIVSSLANEDVDSYVLSESSLFVYAYKIIIKTCGTTKLLLAIPPILKLAESISLDVRAVRYTRGSFIFPGAQ 122          
The following BLAST results are available for this feature:
BLAST of CK935768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
DCAM_CATRO1.512e-4877.42S-adenosylmethionine decarboxylase proenzyme OS=Ca... [more]
DCAM_NICSY2.183e-4777.42S-adenosylmethionine decarboxylase proenzyme OS=Ni... [more]
DCAM_TOBAC8.295e-4777.24S-adenosylmethionine decarboxylase proenzyme OS=Ni... [more]
DCAM_SOLTU8.295e-4775.20S-adenosylmethionine decarboxylase proenzyme OS=So... [more]
DCAM_DATST1.848e-4674.40S-adenosylmethionine decarboxylase proenzyme OS=Da... [more]
DCAM_SOLCI2.413e-4675.00S-adenosylmethionine decarboxylase proenzyme OS=So... [more]
DCAM_IPONI4.117e-4674.40S-adenosylmethionine decarboxylase proenzyme OS=Ip... [more]
DCAM_IPOBA1.564e-4573.60S-adenosylmethionine decarboxylase proenzyme OS=Ip... [more]
DCAM_PEA4.552e-4576.23S-adenosylmethionine decarboxylase proenzyme OS=Pi... [more]
DCAM_VICFA1.324e-4474.59S-adenosylmethionine decarboxylase proenzyme OS=Vi... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004390_H08 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IVF_H08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935768 ID=CK935768; Name=CK935768; organism=Citrus sinensis; type=EST; length=891bp
GGGGAACGAAACGGACGGAAGGAAATCGAAATTCGTTTTGTGAAACAGAG
TTAAAAATCAACCCTTCTTTAATCCTCAAGGAATTTTATTATTTTTTTGG
TCTCTGAATCGAGGGTTTTGCTTCTTGGTTTAGTGGGTTTGTTTTCGTTA
TATTATCTGAGAAAGGCTGAATGATCTAATGGAGTCAAAAGGTGGTAAGA
AGAAGTCTAGCAGTAGTTCCTTATTCTACGAAGCTCCTCTTGGTTACAGC
ATTGAAGACGTTCGACCTCACGGTGGCATAAAGAAGTTCAGATCAGCTGC
TTACTCAAACTGCGTCCGCAAACCATCCTGAGATCGTCCAATTTGTCCCA
TACCCCCCCAAAAAAAAGCTCACTACTACTGCAATTTTAATTTTTTTTAG
TTTTAGCCGTCTTAATACTGCAATTTACTTGGCCTATTTCTTTTTCGACT
TCCCTCGTTCTCTCGTTCTGCCCTCTTTGCTCTTTGCAATTGTCATTTGT
TTTCTGTAAGGCAAGATGGCCTTGCCAGTCTCTGCAATTGGATTTGAAGG
TTATGAAAAGAGGCTTGAAGTTTCCTTTTTTGAGCCTGGTGTCTTTGCTG
ATCCTGGAGGTAGGGGCCTCCGCTCTCTGTCAAAACATCAATTGGATGAA
ATACTGAAACCTGCGGAATGCACAATTGTTTCTTCGTTGTCAAATGAATA
TCTTGATTCATATGTCCTCTCAGAATCAAGCCTCTTTGTGTACCCTTACA
AAGTTATTATCAAAACTTGTGGGACTACCAAGCTGCTTCTTTCAATCCCT
GCCATCCTCAAGTTATCTGAGTCCCTCTCGTTGTCTGTTCGATCTGTGAG
ATACACTCGTGGAAGCTTCATATTTGCTGGGGCTCAGCCAT
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