CK935772

Overview
NameCK935772
Unique NameCK935772
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length609
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10419 contig Csv1_Contig10419:387..995. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935772 vs. ExPASy Swiss-Prot
Match: DCS3_GOSAR ((+)-delta-cadinene synthase isozyme A OS=Gossypium arboreum GN=CAD1-A PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.292e-39
Identity = 70/138 (50.72%), Postives = 99/138 (71.74%), Query Frame = 2
Query:    5 SFVGMGDIVTKESFEWLFSNPRFIRASSIVCRLMDDIVSHKFEQSRGHVASSVECYMKQHGATEEEACNELRKQVSNAWKDINEDCLRPTVVPMPLLMRILNLTRVIDVIYKYEDGYTHSAVVLKDFVASLFINPVPI 418
            +FVGMG+++T E+F+W  S+P+ I+AS+I+CR MDDI  HKF   R    S++ECYMKQ+G T +EA NE  K + ++WKD+NE+ L+PT +P P+L R LNL RV+DV+Y+  DGYTH     K  + SL I+P+ I
Sbjct:  418 AFVGMGEVITPETFKWAASDPKIIKASTIICRFMDDIAEHKFNHRREDDCSAIECYMKQYGVTAQEAYNEFNKHIESSWKDVNEEFLKPTEMPTPVLCRSLNLARVMDVLYREGDGYTHVGKAAKGGITSLLIDPIQI 555          
BLAST of CK935772 vs. ExPASy Swiss-Prot
Match: DCS1_GOSAR ((+)-delta-cadinene synthase isozyme XC1 OS=Gossypium arboreum PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 9.895e-36
Identity = 67/138 (48.55%), Postives = 97/138 (70.29%), Query Frame = 2
Query:    5 SFVGMGDIVTKESFEWLFSNPRFIRASSIVCRLMDDIVSHKFEQSRGHVASSVECYMKQHGATEEEACNELRKQVSNAWKDINEDCLRPTVVPMPLLMRILNLTRVIDVIYKYEDGYTHSAVVLKDFVASLFINPVPI 418
            SFVGMGDIVT E+F+W  S+P+ I+AS+I+CR MDD+  HKF+  R    S++ECYM+++G T +EA +   K V +AWKD+N++ L+PT +P  +L R LNL RV+DV+Y+  DGYT+     K  + SL I P+ +
Sbjct:  417 SFVGMGDIVTPETFKWAASDPKIIQASTIICRFMDDVAEHKFKHRREDDCSAIECYMEEYGVTAQEAYDVFNKHVESAWKDLNQEFLKPTEMPTEVLNRSLNLARVMDVLYREGDGYTYVGKAAKGGITSLLIEPIAL 554          
BLAST of CK935772 vs. ExPASy Swiss-Prot
Match: DCS2_GOSAR ((+)-delta-cadinene synthase isozyme XC14 OS=Gossypium arboreum PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.688e-35
Identity = 67/138 (48.55%), Postives = 97/138 (70.29%), Query Frame = 2
Query:    5 SFVGMGDIVTKESFEWLFSNPRFIRASSIVCRLMDDIVSHKFEQSRGHVASSVECYMKQHGATEEEACNELRKQVSNAWKDINEDCLRPTVVPMPLLMRILNLTRVIDVIYKYEDGYTHSAVVLKDFVASLFINPVPI 418
            SFVGMGDIVT E+F+W  ++P+ I+AS+I+CR MDD+  HKF+  R    S++ECYM+++G T +EA +   K V +AWKD+N++ L+PT +P  +L R LNL RV+DV+Y+  DGYT+     K  + SL I PV +
Sbjct:  417 SFVGMGDIVTPETFKWAANDPKIIQASTIICRFMDDVAEHKFKHRREDDCSAIECYMEEYGVTAQEAYDVFNKHVESAWKDVNKEFLKPTEMPTEVLNRSLNLARVMDVLYREGDGYTYVGKAAKGGITSLLIEPVAL 554          
BLAST of CK935772 vs. ExPASy Swiss-Prot
Match: DCS1_GOSHI ((+)-delta-cadinene synthase OS=Gossypium hirsutum GN=CDN1 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.760e-35
Identity = 66/138 (47.83%), Postives = 96/138 (69.57%), Query Frame = 2
Query:    5 SFVGMGDIVTKESFEWLFSNPRFIRASSIVCRLMDDIVSHKFEQSRGHVASSVECYMKQHGATEEEACNELRKQVSNAWKDINEDCLRPTVVPMPLLMRILNLTRVIDVIYKYEDGYTHSAVVLKDFVASLFINPVPI 418
            SFVGMGDIVT E+F+W  ++P+ I+AS+I+CR MDD+  HKF+  R    S++ECYM+++G T +EA +   K V +AWKD+N+  L+PT +P  +L R LNL RV+DV+Y+  DGYT+     K  + SL I P+ +
Sbjct:  417 SFVGMGDIVTPETFKWAANDPKIIQASTIICRFMDDVTEHKFKHRREDDCSAIECYMEEYGVTAQEAYDVFNKHVESAWKDVNQGFLKPTEMPTEVLNRSLNLARVMDVLYREGDGYTYVGKAAKGGITSLLIEPIAL 554          
BLAST of CK935772 vs. ExPASy Swiss-Prot
Match: DCS4_GOSAR ((+)-delta-cadinene synthase isozyme C2 OS=Gossypium arboreum GN=CAD1-C2 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.437e-34
Identity = 64/138 (46.38%), Postives = 96/138 (69.57%), Query Frame = 2
Query:    5 SFVGMGDIVTKESFEWLFSNPRFIRASSIVCRLMDDIVSHKFEQSRGHVASSVECYMKQHGATEEEACNELRKQVSNAWKDINEDCLRPTVVPMPLLMRILNLTRVIDVIYKYEDGYTHSAVVLKDFVASLFINPVPI 418
            SFVGMGDIVT E+F+W  ++P+ I+AS+I+CR MDD+  HKF+  R    S++ECYM+++G + +EA +   K V +AWKD+N++  +PT +P  +L R LNL RV+DV+Y+  DGYT+     K  + SL I P+ +
Sbjct:  417 SFVGMGDIVTPETFKWAANDPKIIQASTIICRFMDDVAEHKFKHRREDDCSAIECYMEEYGVSAQEAYDVFNKHVESAWKDVNQEFQKPTEMPTEVLNRSLNLARVMDVLYREGDGYTYVGKAAKGGITSLLIEPIAL 554          
BLAST of CK935772 vs. ExPASy Swiss-Prot
Match: HUMS_ARATH (Alpha-humulene/(-)-(E)-beta-caryophyllene synthase OS=Arabidopsis thaliana GN=TPS21 PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 7.092e-34
Identity = 67/138 (48.55%), Postives = 97/138 (70.29%), Query Frame = 2
Query:    5 SFVGMGDIVTKESFEWLFSNPRFIRASSIVCRLMDDIVSHKFEQSRGHVASSVECYMKQHGATEEEACNELRKQVSNAWKDINEDCLRPTVVPMPLLMRILNLTRVIDVIYKYEDGYTHSAVVLKDFVASLFINPVPI 418
            +FV M D+   ++FEWL S+P+   AS I+ R  DDI S++FE  R HVA+ ++CYM+Q G ++E A   +   VS+AWKD+N++ +RP V P PLLMR+LNL+RVIDV Y+Y+D YT+   +LK+ + SL I  +PI
Sbjct:  411 TFVRMTDVAKLDAFEWLSSHPKIRVASEIISRFTDDISSYEFEHKREHVATGIDCYMQQFGVSKERAVEVMGNIVSDAWKDLNQELMRPHVFPFPLLMRVLNLSRVIDVFYRYQDAYTNPK-LLKEHIVSLLIETIPI 547          
BLAST of CK935772 vs. ExPASy Swiss-Prot
Match: CASS_RICCO (Casbene synthase, chloroplastic OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 7.841e-33
Identity = 67/138 (48.55%), Postives = 94/138 (68.12%), Query Frame = 2
Query:    5 SFVGMGDIVTKESFEWLFSNPRFIRASSIVCRLMDDIVSHKFEQSRGHVASSVECYMKQHGATEEEACNELRKQVSNAWKDINEDCLRPTVVPMPLLMRILNLTRVIDVIYKYEDGYTHSAVVLKDFVASLFINPVPI 418
            SF+G+ +I     F+WL +NP+   AS    RL++D+ SH  EQ RGHVAS ++CYM QHG +++EA   L+K  ++ WK+INE+C+R + V +  LMRI+NL R+ DV YKY DGYT S   LK FV  LF++P+ I
Sbjct:  465 SFMGVQEITGLNEFQWLETNPKLSYASGAFIRLVNDLTSHVTEQQRGHVASCIDCYMNQHGVSKDEAVKILQKMATDCWKEINEECMRQSQVSVGHLMRIVNLARLTDVSYKYGDGYTDSQ-QLKQFVKGLFVDPISI 601          
BLAST of CK935772 vs. ExPASy Swiss-Prot
Match: ECS1_ARTAN (Epi-cedrol synthase OS=Artemisia annua GN=ECS1 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 9.584e-31
Identity = 62/136 (45.59%), Postives = 94/136 (69.12%), Query Frame = 2
Query:    8 FVGMGDIVTKESFEWLFSNPRFIRASSIVCRLMDDIVSHKFEQSRGHVASSVECYMKQHGATEEEACNELRKQVSNAWKDIN-EDCLRPTVVPMPLLMRILNLTRVIDVIYKYEDGYTHSAVVLKDFVASLFINPV 412
            F  MGD++  +SFEW+F+NP  + A  ++CR MDD+ SHK EQ R HVAS++ECYMKQ  A+E++A   L K+V +AWK+IN E  +    V + + MR+LN +R +DV+YK +D +TH  V + + + SLF++ +
Sbjct:  410 FACMGDVIADDSFEWVFTNPPLVNACCLLCRTMDDLGSHKGEQDRKHVASTIECYMKQFDASEQQAYESLNKKVEDAWKEINREFMITCKDVNIHVAMRVLNFSRSVDVLYKNKDHFTHVGVEVINHIKSLFVDAI 545          
BLAST of CK935772 vs. ExPASy Swiss-Prot
Match: 5EAS_TOBAC (Aristolochene synthase OS=Nicotiana tabacum GN=EAS3 PE=1 SV=3)

HSP 1 Score: 122.865 bits (307), Expect = 1.295e-27
Identity = 58/139 (41.73%), Postives = 89/139 (64.03%), Query Frame = 2
Query:    5 SFVGMGDIVTKESFEWLFSNPRFIRASSIVCRLMDDIVSHKFEQSRGHVASSVECYMKQHGATEEEACNELRKQVSNAWKDINEDCLRPTVVPMPLLMRILNLTRVIDVIYKYE-DGYTHSAVVLKDFVASLFINPVPI 418
            S++GM    T++ FEWL  NP+ + AS I+CR++DD  +++ E+SRG +A+ +EC M+ +G + +EA  + +     AWKDINE  LRPT V    L  ILNL R+++V Y +  DGYTH   VLK  + +L ++ + I
Sbjct:  411 SYLGMKS-ATEQDFEWLSKNPKILEASVIICRVIDDTATYEVEKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILNLARIVEVTYIHNLDGYTHPEKVLKPHIINLLVDSIKI 548          
BLAST of CK935772 vs. ExPASy Swiss-Prot
Match: BARS_ARATH (Alpha-barbatene synthase OS=Arabidopsis thaliana GN=BS PE=1 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.212e-25
Identity = 53/136 (38.97%), Postives = 85/136 (62.50%), Query Frame = 2
Query:    5 SFVGMGDIVTKESFEWLFSNPRFIRASSIVCRLMDDIVSHKFEQSRGHVASSVECYMKQHGATEEEACNELRKQVSNAWKDINEDCLRPTVVPMPLLMRILNLTRVIDVIYKYEDGYTHSAVVLKDFVASLFINPV 412
            S +G+G+I  KE+FEWL S P+ +R      RLMDDI   + +  +G+ A+++  YM +HG T+EEA  EL K   +  K +NE+CL+ T +P  +LM+ +N  R +DV+Y  +D Y H    LK+++  L ++P+
Sbjct:  420 SIMGLGEIGKKEAFEWLISRPKLVRILGAKTRLMDDIADFEEDMEKGYTANALNYYMNEHGVTKEEASRELEKMNGDMNKIVNEECLKITTMPRRILMQSVNYARSLDVLYTADDVYNHREGKLKEYMRLLLVDPI 555          
The following BLAST results are available for this feature:
BLAST of CK935772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
DCS3_GOSAR4.292e-3950.72(+)-delta-cadinene synthase isozyme A OS=Gossypium... [more]
DCS1_GOSAR9.895e-3648.55(+)-delta-cadinene synthase isozyme XC1 OS=Gossypi... [more]
DCS2_GOSAR1.688e-3548.55(+)-delta-cadinene synthase isozyme XC14 OS=Gossyp... [more]
DCS1_GOSHI3.760e-3547.83(+)-delta-cadinene synthase OS=Gossypium hirsutum ... [more]
DCS4_GOSAR2.437e-3446.38(+)-delta-cadinene synthase isozyme C2 OS=Gossypiu... [more]
HUMS_ARATH7.092e-3448.55Alpha-humulene/(-)-(E)-beta-caryophyllene synthase... [more]
CASS_RICCO7.841e-3348.55Casbene synthase, chloroplastic OS=Ricinus communi... [more]
ECS1_ARTAN9.584e-3145.59Epi-cedrol synthase OS=Artemisia annua GN=ECS1 PE=... [more]
5EAS_TOBAC1.295e-2741.73Aristolochene synthase OS=Nicotiana tabacum GN=EAS... [more]
BARS_ARATH1.212e-2538.97Alpha-barbatene synthase OS=Arabidopsis thaliana G... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004390_G04 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IVF_G04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935772 ID=CK935772; Name=CK935772; organism=Citrus sinensis; type=EST; length=609bp
GGGATCCTTTGTTGGCATGGGAGACATTGTAACTAAAGAATCTTTTGAGT
GGTTATTCAGCAATCCTAGATTTATTAGGGCTTCTTCTATAGTTTGCCGA
CTCATGGATGACATAGTGTCACACAAGTTTGAACAAAGCAGAGGGCACGT
TGCCTCAAGCGTTGAGTGTTACATGAAACAACATGGAGCAACAGAAGAGG
AAGCATGCAATGAGCTTCGGAAACAAGTTTCAAATGCCTGGAAGGATATA
AATGAGGACTGCCTACGCCCAACGGTTGTGCCAATGCCACTTCTGATGCG
AATTCTCAATCTTACACGCGTTATAGATGTCATTTACAAGTATGAAGATG
GCTACACTCATTCCGCAGTTGTGCTGAAAGATTTTGTTGCTTCTTTGTTT
ATTAATCCTGTGCCGATATGTGTATGATATTACGCTTATGTTTTCAACTA
CTCTGCAGCAAAATAATTCATCCTGTGCCGTTTGAGCTTGGATTTGGATT
TTAAAAATAAATTGAAGGGTGGTGACCCCCCCTTGTAATCACACTACTCT
TAAATAGACAAGTGATATTAAAGTTTTTGTAAAAAAAAAAAAAAAAAAAA
AAAAAAAAA
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