CK935777

Overview
NameCK935777
Unique NameCK935777
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length743
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1852 contig Csv1_Contig1852:1..743. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: CP19D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Arabidopsis thaliana GN=CYP19-4 PE=1 SV=2)

HSP 1 Score: 252.292 bits (643), Expect = 2.043e-66
Identity = 119/176 (67.61%), Postives = 138/176 (78.41%), Query Frame = 2
Query:  164 DVFEITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGELP 691
            D+ E+TH+VY DV+I+ +  GR+VIGL+G+ VPKT ENFRALCTGEKG G SGKPLHYKG  FHRI+  F+IQGGD   G+G G +SIYG  F DENFK+KH+  GV+SM NSG D+NGSQFFITTV  SWLDG HVVFGKV+QGMD VY IE   G  SG P+ KV IADSGELP
Sbjct:   26 DLKEVTHKVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIE-AEGKQSGTPKSKVVIADSGELP 200          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: CP20A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Arabidopsis thaliana GN=CYP20-1 PE=1 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.371e-62
Identity = 112/173 (64.74%), Postives = 133/173 (76.88%), Query Frame = 2
Query:  173 EITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGELP 691
            EITH+VY DV+I+ +  GRIV+GL+G+ VPKTVENFRALCTGEKG G +GK LHYKG  FHRI+  F++QGGD   G+G G +SIYG  F DENFK+KH+  G +SM N+G D+NGSQFFITTV  SWLDG HVVFGKV+ GMD VY +E   G  SG P+ KV I DSGELP
Sbjct:   32 EITHKVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSWLDGRHVVFGKVVTGMDVVYKVE-AEGNQSGTPKSKVVIVDSGELP 203          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: PPIB_DICDI (Peptidyl-prolyl cis-trans isomerase B OS=Dictyostelium discoideum GN=cypB PE=1 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.875e-60
Identity = 110/172 (63.95%), Postives = 133/172 (77.33%), Query Frame = 2
Query:  173 EITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEL 688
            +IT++V+ D++I+ +  GRIV GLYG+ VPKTVENFRALCTGEKG G SGKPLHYK   FHRI+  F+IQGGD  RGDG G +SIYG  F DENFKIKHS  G++SM N+GP++NGSQFFITTV  SWLDG H VFG+VI+GMD V  +E   G+ SG P K   I++SGEL
Sbjct:   27 KITNKVFFDIEIDNKPAGRIVFGLYGKTVPKTVENFRALCTGEKGLGTSGKPLHYKDSKFHRIIPNFMIQGGDFTRGDGTGGESIYGKKFNDENFKIKHSKPGLLSMANAGPNTNGSQFFITTVVTSWLDGRHTVFGEVIEGMDIVKLLE-SIGSQSGTPSKIAKISNSGEL 197          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: CYP7_CAEEL (Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhabditis elegans GN=cyn-7 PE=1 SV=2)

HSP 1 Score: 220.32 bits (560), Expect = 8.605e-57
Identity = 102/168 (60.71%), Postives = 129/168 (76.79%), Query Frame = 2
Query:  185 RVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEL 688
            RV+ D+ I  +  GRIV+ LY  +VPKT ENFRALCTGEKG G SGKPLH+KG  FHRI+  F+IQGGD  RG+G G +SIYG  FPDENFK KH+  GV+SM N+GP++NGSQFF+ TVK +WLDG+HVVFG+V++G+D V  +EG  G+ SG P+ +  IAD G+L
Sbjct:    5 RVFFDITIAGKPTGRIVMELYNDIVPKTAENFRALCTGEKGVGKSGKPLHFKGSKFHRIIPEFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTAWLDGKHVVFGRVVEGLDIVSKVEGN-GSSSGTPKSECLIADCGQL 171          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: PPIB_YARLI (Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia lipolytica GN=CPR2 PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.623e-55
Identity = 104/176 (59.09%), Postives = 127/176 (72.16%), Query Frame = 2
Query:  173 EITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGELPKNK 700
            EITH+VY D+   E+ LG+IV+GLYG VVPKTVENFRALCTGE G G       YKG  FHR++  F+IQGGD  RGDG G +SIYG  FPDENF++KH+    +SM N+G D+NGSQFFITTV  SWLDG+HVVFG+V++G D V AIE         P+  +TIAD+GE+P  K
Sbjct:   29 EITHKVYFDIKQGEESLGKIVMGLYGDVVPKTVENFRALCTGETGKG-------YKGSKFHRVIKNFMIQGGDFTRGDGTGGESIYGRKFPDENFQLKHTKPYKLSMANAGRDTNGSQFFITTVVTSWLDGKHVVFGEVLEGQDIVDAIENAPTGARSNPKVDITIADAGEIPVEK 197          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: CYP3_CAEEL (Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhabditis elegans GN=cyn-3 PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.623e-55
Identity = 102/168 (60.71%), Postives = 126/168 (75.00%), Query Frame = 2
Query:  185 RVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEL 688
            +V+ D+ I  +  GRIV+ LY  VVPKT  NFRALCTGE G G SGKPLH+KG  FHRI+  F+IQGGD  RG+G G +SIYG  FPDENFK KH+  GV+SM N+GP++NGSQFF+ TVK  WLDG+HVVFG+V++G+D V A+E   G+ SGKP K   IAD G+L
Sbjct:    5 KVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESN-GSQSGKPVKDCMIADCGQL 171          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: PPIB_ORPSP (Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) GN=CYPB PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.984e-53
Identity = 103/173 (59.54%), Postives = 124/173 (71.68%), Query Frame = 2
Query:  173 EITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGELP 691
            ++T++VY D+   ++ LGRIV+GLYG+VVPKTVENFRAL TGEKG G       YK   FHR++  F+IQGGD  RGDG G  SIYG  F DENFK++H+  G++SM N+G D+NGSQFFITTV  SWLDG HVVFGKVI+GMD V AIE        +P   V IAD GELP
Sbjct:   27 KVTNKVYFDIKQGDKDLGRIVLGLYGEVVPKTVENFRALATGEKGYG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFADENFKLRHTGPGILSMANAGRDTNGSQFFITTVTTSWLDGRHVVFGKVIEGMDVVTAIETTKTLPGDRPATPVIIADCGELP 192          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: CP18C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Arabidopsis thaliana GN=CYP18-3 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.984e-53
Identity = 97/168 (57.74%), Postives = 124/168 (73.81%), Query Frame = 2
Query:  185 RVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEL 688
            +VY D+ I+ Q  GRIV+ LY    P+T ENFRALCTGEKG G +GKPLH+KG  FHR++  F+ QGGD   G+G G +SIYG  F DENF+ KH+  G++SM N+G ++NGSQFFI TVK  WLDG+HVVFG+V++G+D V AIE   G+ SGKP K V +AD G+L
Sbjct:    5 KVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIE-KVGSSSGKPTKPVVVADCGQL 171          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: CYPH_CATRO (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.384e-53
Identity = 97/168 (57.74%), Postives = 122/168 (72.62%), Query Frame = 2
Query:  185 RVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEL 688
            RV+ D+ +  Q  GRIV+ L+    P+T ENFRALCTGEKGTG SGKPLHYK   FHR++ GF+ QGGD   G+G G +SIYG  F DENF  KH+  G++SM N+GP++NGSQFFI T K  WLDG+HVVFG+V++GMD V AIE   G+ SG+  KKV + D G+L
Sbjct:    5 RVFFDMSVGGQPAGRIVMELFADTTPRTAENFRALCTGEKGTGRSGKPLHYKDSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGQVVEGMDVVKAIE-KVGSSSGRTAKKVVVEDCGQL 171          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: CP20B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic OS=Arabidopsis thaliana GN=CYP20-2 PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.772e-53
Identity = 102/179 (56.98%), Postives = 127/179 (70.95%), Query Frame = 2
Query:  173 EITHRVYLDVDIEE---QRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGELPKNK 700
            +ITH+VY D+ +     +  GRIVIGLYG  VP+TVENFRALCTGEKG G       YKG  FHR++  F+IQGGD  +G+G G  S+YG TF DENFK+ H   GV+SM N+GP++NGSQFFI T+K SWLDG HVVFG+VI+GM+ V  IE        +PRKKV IAD G+LP ++
Sbjct:   87 KITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFG-------YKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIEGMEVVKLIEEQETDRGDRPRKKVVIADCGQLPMSE 258          
The following BLAST results are available for this feature:
BLAST of CK935777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
CP19D_ARATH2.043e-6667.61Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Ara... [more]
CP20A_ARATH1.371e-6264.74Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Ara... [more]
PPIB_DICDI4.875e-6063.95Peptidyl-prolyl cis-trans isomerase B OS=Dictyoste... [more]
CYP7_CAEEL8.605e-5760.71Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhab... [more]
PPIB_YARLI1.623e-5559.09Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia ... [more]
CYP3_CAEEL1.623e-5560.71Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhab... [more]
PPIB_ORPSP1.984e-5359.54Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyc... [more]
CP18C_ARATH1.984e-5357.74Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Ara... [more]
CYPH_CATRO3.384e-5357.74Peptidyl-prolyl cis-trans isomerase OS=Catharanthu... [more]
CP20B_ARATH5.772e-5356.98Peptidyl-prolyl cis-trans isomerase CYP20-2, chlor... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004390_G10 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IVF_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935777 ID=CK935777; Name=CK935777; organism=Citrus sinensis; type=EST; length=743bp
GGGGGCTGATTTTACCGTTAGAAAGCAAAAGAGACGCCTCGAAACGATGC
GTAGAGAGATCTCGGGCTTCGTTCGGACGCGATATCTTCTACTTTTTGTT
CTCATCTTTGTCTTTCTCATTGCCGCTTTCAGTAGTCGCAGAAAGGAAGA
AGAGAAGGAGGAAGATGTGTTTGAAATTACACATAGAGTATACTTGGATG
TTGATATAGAAGAGCAACGTTTAGGTAGAATTGTTATTGGATTGTATGGC
CAAGTTGTACCAAAAACTGTTGAAAATTTCAGGGCTTTATGCACAGGAGA
AAAAGGCACTGGGGCAAGTGGGAAACCTCTGCACTATAAGGGAAAACCAT
TCCATCGTATTGTATCTGGGTTTGTGATTCAAGGTGGAGATATAGTCCGT
GGTGATGGCAAGGGAAGTGACTCTATATATGGTGGCACTTTTCCTGATGA
GAACTTTAAGATTAAACACTCACATGCAGGTGTTGTTTCCATGGTGAATT
CAGGACCTGATTCCAATGGCTCTCAATTCTTCATCACCACTGTCAAGGCC
AGCTGGTTGGATGGGGAGCATGTCGTCTTCGGGAAGGTTATTCAAGGCAT
GGACACTGTGTATGCTATTGAAGGTGGAGCTGGAACTTACAGTGGAAAAC
CAAGAAAGAAAGTCACTATTGCTGACTCAGGAGAGTTACCCAAGAACAAG
TGGGATGAGGAAAGGTGAGGATCCTCGATTGTATTTACAACGA
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