CK935779

Overview
NameCK935779
Unique NameCK935779
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length826
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7741 contig Csv1_Contig7741:35..860. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935779 vs. ExPASy Swiss-Prot
Match: USF_AQUPY (Protein usf OS=Aquifex pyrophilus GN=usf PE=4 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.889e-18
Identity = 71/242 (29.34%), Postives = 110/242 (45.45%), Query Frame = 3
Query:  117 IQIQRDDTTFDAYVVG-KEDAPGIVVVQEWWGVDFEIKNHAVKISQL-NPGFKALIPDLYRGKVGLDTAEAQHLMSG-----LDWPGAVKDIHASVNWLKA---NGSKKVGVTGYCMGGALAIASSVLVPE-VDAVVSFYGVPPPELADPTQAKAPVQAHFGELDNFVGFSDVKTXXXXXXXXXXSGVPYEVHIYPGSAHAFMNISPDGVKRRXEMGMDDHDPAXXELARSRFQSWMTRYLS 809
            ++ +++      Y+   K   PG++V+ EWWG++  + N      +    GF A  PD Y GK   +  +A  LM+      +D   A+    ASV++LK       KKVGVTG+C GG L++  +   P+ +DA V FYG+P     D    K P+     E D FV   +V            +GV  +V +Y G  HAF+N          E   D +DP   + A +   ++   YL+
Sbjct:    5 VEFEKNGVKVRGYIATPKWGGPGVIVIHEWWGLESPLSNIKEICDRFAQEGFVAFAPDFYEGKYADNPDDAGKLMTDMFENRMDKVDAI--FKASVDFLKECRYTSPKKVGVTGFCCGGTLSMYFAGKFPDLIDASVPFYGLPQITKIDAENIKVPIFFILAEKDEFVNNDEV---IDIAKKVWKNGVDVKVKVYSGVTHAFLN----------EKREDVYDPCRAQDAWNLTVAFFKEYLT 231          
BLAST of CK935779 vs. ExPASy Swiss-Prot
Match: DLHH_AQUAE (Putative carboxymethylenebutenolidase OS=Aquifex aeolicus GN=aq_1997 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.773e-16
Identity = 59/202 (29.21%), Postives = 96/202 (47.52%), Query Frame = 3
Query:  117 IQIQRDDTTFDAYVVGKEDA-PGIVVVQEWWGVDFEIKNHAVKISQL-NPGFKALIPDLYRGKVGLDTAEAQHLMSGL---DWPGAVKDIHASVNWLKA---NGSKKVGVTGYCMGGALAIASSVLVPE-VDAVVSFYGVPPPELADPTQAKAPVQAHFGELDNFVGFSDVKTXXXXXXXXXXSGVPYEVHIYPGSAHAFMN 695
            ++ +++      Y+   + A P ++V  EWWG++  + N      +L + GF A  PD Y+G+   +  +A  LM+ +         +   ASV ++K       KKVG+TG+C GG LA+  +   PE VDA + FYG+P     +    K P+     E D FV   +V            +GV  +V ++ G  HAF+N
Sbjct:    5 VEFEKNGVKVRGYIATPKWAGPAVLVFHEWWGLESPLSNIKEICDKLADEGFVAFAPDFYKGQYADNPDDAGKLMTEMFEKRMDEVDRIFQASVEFVKECRYTYPKKVGITGFCCGGTLAMYFAAKFPEMVDASLPFYGLPQLTQINAENIKVPIFFILAEKDEFVNNDEV---IDIAKTVWKNGVDVQVKVFSGVTHAFLN 203          
BLAST of CK935779 vs. ExPASy Swiss-Prot
Match: YGHX_ECOLI (Putative uncharacterized protein yghX OS=Escherichia coli (strain K12) GN=yghX PE=5 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 4.354e-15
Identity = 63/215 (29.30%), Postives = 102/215 (47.44%), Query Frame = 3
Query:  177 PGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGKVGL--DTAEAQHLMSGLDWPGAVKDIHASVNWLKA--NGSKKVGVTGYCMGGALAIASSVLVPEVDAVVSFYGVPPPELADPTQAKAPVQAHFGELDNFVGFSDVKTXXXXXXXXXXSGVPYEVHIYPGSAHAFMNISPDGVKRRXEMGMDDHDPAXXELARSRFQSWMTRYLS 809
            P +VVV E  G++  I++ A ++++   G+ AL PD      G   +  + + L   +D    + D  A++ +++     + KVG+TG+C GG ++ A++V  PE+   V FYG   P  AD  + +AP+  HF ELD  +     +           +   YE +IYPG  H F N   D   R        +D +  +LA  R   W  +YLS
Sbjct:   82 PAVVVVHENRGLNPYIEDVARRVAKA--GYIALAPDGLSSVGGYPGNDDKGRELQQQVDPTNLMNDFFAAIEFMQRYPQATGKVGITGFCYGGGVSNAAAVAYPELACAVPFYGRQAP-TADVAKIEAPLLLHFAELDTRIN----EGWPAYEAALKANNKVYEAYIYPGVNHGFHN---DSTPR--------YDKSAADLAWQRTLKWFDKYLS 278          
The following BLAST results are available for this feature:
BLAST of CK935779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
USF_AQUPY1.889e-1829.34Protein usf OS=Aquifex pyrophilus GN=usf PE=4 SV=1[more]
DLHH_AQUAE8.773e-1629.21Putative carboxymethylenebutenolidase OS=Aquifex a... [more]
YGHX_ECOLI4.354e-1529.30Putative uncharacterized protein yghX OS=Escherich... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004390_F05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IVF_F05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935779 ID=CK935779; Name=CK935779; organism=Citrus sinensis; type=EST; length=826bp
GGGGGAGCAGATNNNCTCCGCTTCTTAAGCCATCTCTCGCAAGGACTCAC
TTTCCCGCCGGTTATCGCTTTGCAGTCAGATCAATGGCAGACTCTGCAGC
TTCTCCCTTCAAGAAAATCCAGATTCAGAGAGATGATACTACTTTTGATG
CATATGTGGTTGGCAAAGAAGACGCCCCTGGGATTGTTGTAGTTCAGGAG
TGGTGGGGTGTTGATTTTGAGATCAAGAACCATGCTGTCAAAATCTCCCA
ACTAAATCCTGGATTCAAGGCACTTATACCAGATTTATATCGGGGAAAGG
TTGGTTTGGATACTGCTGAAGCGCAGCACTTGATGAGTGGTCTTGATTGG
CCAGGTGCTGTCAAGGATATCCACGCTTCAGTTAATTGGCTTAAGGCAAA
TGGTTCCAAGAAGGTTGGCGTGACTGGATATTGCATGGGAGGTGCTCTCG
CTATTGCAAGTTCTGTCTTAGTTCCTGAGGTTGATGCTGTTGTTTCATTT
TATGGGGTTCCCCCACCTGAGCTCGCCGATCCTACCCAGGCTAAGGCACC
TGTTCAAGCTCATTTTGGGGAGCTTGACAATTTTGTTGGCTTTTCAGATG
TGAAAACTGCCAAAGCATTGGAGGAAAAGCTGAAAGCATCTGGTGTTCCA
TATGAGGTACATATTTATCCTGGCAGTGCACATGCTTTCATGAACATTTC
TCCGGATGGAGTGAAGAGGAGGNAAGAAATGGGAATGGATGATCACGATC
CAGCNNNNNNTGAGCTGGCGCGGTCTCGCTTCCAATCATGGATGACCCGC
TACTTATCTGCTTAAGTAATTCACTA
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