CK935783

Overview
NameCK935783
Unique NameCK935783
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK935783 vs. ExPASy Swiss-Prot
Match: ARF1_ORYSJ (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica GN=Os01g0813400 PE=2 SV=3)

HSP 1 Score: 360.147 bits (923), Expect = 7.398e-99
Identity = 178/181 (98.34%), Postives = 179/181 (98.90%), Query Frame = 3 
Query:   99 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELGDAVLLVFANKQDLPNAMNATEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 641
            MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RVVEARDELHRMLNEDEL DAVLLVFANKQDLPNAMNA EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Sbjct:    1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181
[Close]
BLAST of CK935783 vs. ExPASy Swiss-Prot
Match: ARF2_ORYSJ (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2)

HSP 1 Score: 358.992 bits (920), Expect = 1.648e-98
Identity = 177/181 (97.79%), Postives = 179/181 (98.90%), Query Frame = 3 
Query:   99 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELGDAVLLVFANKQDLPNAMNATEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 641
            MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RVVEARDELHRMLNEDEL DAVLLVFANKQDLPNAMNA EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA+KA
Sbjct:    1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 181
[Close]
BLAST of CK935783 vs. ExPASy Swiss-Prot
Match: ARF_VIGUN (ADP-ribosylation factor OS=Vigna unguiculata GN=ARF PE=2 SV=3)

HSP 1 Score: 358.607 bits (919), Expect = 2.152e-98
Identity = 177/181 (97.79%), Postives = 179/181 (98.90%), Query Frame = 3 
Query:   99 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELGDAVLLVFANKQDLPNAMNATEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 641
            MGL+FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL DAVLLVFANKQDLPNAMNA EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGL+WLSNNIASKA
Sbjct:    1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLEWLSNNIASKA 181
[Close]
BLAST of CK935783 vs. ExPASy Swiss-Prot
Match: ARF1_ARATH (ADP-ribosylation factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2)

HSP 1 Score: 357.451 bits (916), Expect = 4.795e-98
Identity = 177/181 (97.79%), Postives = 178/181 (98.34%), Query Frame = 3 
Query:   99 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELGDAVLLVFANKQDLPNAMNATEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 641
            MGL+F KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL DAVLLVFANKQDLPNAMNA EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Sbjct:    1 MGLSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181
[Close]
BLAST of CK935783 vs. ExPASy Swiss-Prot
Match: ARF2_ARATH (ADP-ribosylation factor 2 OS=Arabidopsis thaliana GN=ARF2-A PE=2 SV=3)

HSP 1 Score: 356.681 bits (914), Expect = 8.179e-98
Identity = 176/181 (97.24%), Postives = 177/181 (97.79%), Query Frame = 3 
Query:   99 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELGDAVLLVFANKQDLPNAMNATEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 641
            MGL+F KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL DAVLLVFANKQDLPNAMNA EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA KA
Sbjct:    1 MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAGKA 181
[Close]
BLAST of CK935783 vs. ExPASy Swiss-Prot
Match: ARF1_DAUCA (ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1 PE=2 SV=2)

HSP 1 Score: 356.681 bits (914), Expect = 8.179e-98
Identity = 176/181 (97.24%), Postives = 178/181 (98.34%), Query Frame = 3 
Query:   99 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELGDAVLLVFANKQDLPNAMNATEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 641
            MGL+FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL DAVLLVFANKQDLPNAMNA EI DKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK+
Sbjct:    1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEIIDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKS 181
[Close]
BLAST of CK935783 vs. ExPASy Swiss-Prot
Match: ARF_MAIZE (ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 SV=2)

HSP 1 Score: 353.599 bits (906), Expect = 6.924e-97
Identity = 174/181 (96.13%), Postives = 179/181 (98.90%), Query Frame = 3 
Query:   99 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELGDAVLLVFANKQDLPNAMNATEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 641
            MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL DAVLLVFANKQDLPNAMNA EITDKLGL+SLRQRHWYIQSTCAT+GEGLYEGLDWLS+NIA+K+
Sbjct:    1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLNSLRQRHWYIQSTCATTGEGLYEGLDWLSSNIATKS 181
[Close]
BLAST of CK935783 vs. ExPASy Swiss-Prot
Match: ARF1_SALBA (ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 PE=2 SV=3)

HSP 1 Score: 351.288 bits (900), Expect = 3.436e-96
Identity = 173/181 (95.58%), Postives = 176/181 (97.24%), Query Frame = 3 
Query:   99 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELGDAVLLVFANKQDLPNAMNATEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 641
            MGL+FTKL  RLF+KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRV EARDELHRMLNEDEL DAVLLVFANKQDLPNAMNA EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI+SKA
Sbjct:    1 MGLSFTKLLGRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVGEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNISSKA 181
[Close]
BLAST of CK935783 vs. ExPASy Swiss-Prot
Match: ARF1_CATRO (ADP-ribosylation factor 1 OS=Catharanthus roseus GN=ARF1 PE=2 SV=3)

HSP 1 Score: 350.132 bits (897), Expect = 7.655e-96
Identity = 173/181 (95.58%), Postives = 177/181 (97.79%), Query Frame = 3 
Query:   99 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELGDAVLLVFANKQDLPNAMNATEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 641
            MGL+FTKLFSRLFAKKEMRILMVGLDAAGKTTILY+LKLGEIVTTIPTIGFNVETVEY+ ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL DAVLLVFANKQDLPNAMNA EITDK GLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA+KA
Sbjct:    1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYQLKLGEIVTTIPTIGFNVETVEYQYISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKHGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 181
[Close]
BLAST of CK935783 vs. ExPASy Swiss-Prot
Match: ARF1_CHLRE (ADP-ribosylation factor 1 OS=Chlamydomonas reinhardtii GN=ARF1 PE=2 SV=2)

HSP 1 Score: 348.591 bits (893), Expect = 2.227e-95
Identity = 171/180 (95.00%), Postives = 174/180 (96.67%), Query Frame = 3 
Query:   99 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELGDAVLLVFANKQDLPNAMNATEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 638
            MGL FTK  SRLF KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RVVEARDELHRMLNEDEL DAVLLVFANKQDLPNAMNA EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNN+A+K
Sbjct:    1 MGLRFTKALSRLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNLANK 180
The following BLAST results are available for this feature:
BLAST of CK935783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
ARF1_ORYSJ7.398e-9998.34ADP-ribosylation factor 1 OS=Oryza sativa subsp. j... [more]
ARF2_ORYSJ1.648e-9897.79ADP-ribosylation factor 2 OS=Oryza sativa subsp. j... [more]
ARF_VIGUN2.152e-9897.79ADP-ribosylation factor OS=Vigna unguiculata GN=AR... [more]
ARF1_ARATH4.795e-9897.79ADP-ribosylation factor 1 OS=Arabidopsis thaliana ... [more]
ARF2_ARATH8.179e-9897.24ADP-ribosylation factor 2 OS=Arabidopsis thaliana ... [more]
ARF1_DAUCA8.179e-9897.24ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1... [more]
ARF_MAIZE6.924e-9796.13ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 S... [more]
ARF1_SALBA3.436e-9695.58ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 P... [more]
ARF1_CATRO7.655e-9695.58ADP-ribosylation factor 1 OS=Catharanthus roseus G... [more]
ARF1_CHLRE2.227e-9595.00ADP-ribosylation factor 1 OS=Chlamydomonas reinhar... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004390_F09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IVF_F09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935783 ID=CK935783; Name=CK935783; organism=Citrus sinensis; type=EST; length=773bp
GGGGCAAACCATTTTCCTTTCGACGAAGCTCTTTCTCTTGACTCGACNNN
NAACGGNAAAATCTAAATCCATCACAAGTTAATTAACAACAGCCAGAGAT
GGGATTGACGTTCACGAAGCTGTTTAGTCGGTTATTTGCGAAGAAGGAGA
TGCGAATTCTGATGGTGGGTCTCGACGCCGCCGGTAAGACCACTATTTTG
TACAAGCTTAAGCTCGGTGAGATCGTCACCACCATCCCTACAATCGGTTT
TAATGTGGAGACGGTTGAATACAAGAACATTAGCTTCACGGTTTGGGATG
TCGGAGGTCAGGACAAGATCCGTCCATTGTGGAGGCACTATTTTCAGAAC
ACTCAGGGCCTCATTTTTGTGGTGGATAGCAATGACAGGGATAGAGTAGT
TGAGGCAAGGGATGAGTTGCACCGAATGTTGAATGAGGATGAATTGGGGG
ATGCTGTTCTGCTTGTATTTGCTAACAAACAAGATCTTCCGAATGCAATG
AATGCTACAGAAATAACTGACAAGCTCGGTCTTCATTCTCTTCGCCAGCG
ACACTGGTATATCCAGAGCACATGTGCAACCTCTGGAGAGGGTCTTTACG
AAGGGTTGGATTGGCTTTCCAACAACATCGCTAGCAAGGCTTGAATGAAG
CAGTGAAGATTCTGGCTCCTCTTTTAGATTTCGTTATGGCTTATACCTAT
TCTAGGTATTCTGAAGAAGATAGTTTCCCTTTTGTTCAGTCACTTCTATA
ACAGCATAATGTTTGTTGAAAAT
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