CK935792

Overview
NameCK935792
Unique NameCK935792
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935792 vs. ExPASy Swiss-Prot
Match: PROSC_HUMAN (Proline synthetase co-transcribed bacterial homolog protein OS=Homo sapiens GN=PROSC PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 7.642e-58
Identity = 127/254 (50.00%), Postives = 168/254 (66.14%), Query Frame = 2
Query:  113 RMAAPTVEGAAVTALRSVLHRVRQAAERSGRTQEQI--RVVAVSKTKPVSLIRQVYDAGHRSFGENYVQEIVDKAPQ-----LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 841
            R  + + E     ALR+V  RV+QA  R  R    I  R+VAVSKTKP  ++ + Y  G R+FGENYVQE+++KA       L  +IKWHF+GHLQ      L+  VPNL M+E V + K+A+ ++ +    G  + LKV+VQ+NTSGEESK G+ PS  + IVEH+  +CPNLEF GLMTIG    D +  P  +F+ LL+ R E+CK L +  DQ ELSMGMS DF+ A+E+GST+VRIGSTIFG R+Y+KK
Sbjct:    3 RAGSMSAELGVGCALRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSLCPEIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKLADKVNSSWQRKGSPERLKVMVQINTSGEESKHGLPPSETIAIVEHINAKCPNLEFVGLMTIGSFGHDLSQGPNPDFQLLLSLREELCKKLNIPADQVELSMGMSADFQHAVEVGSTNVRIGSTIFGERDYSKK 255          
BLAST of CK935792 vs. ExPASy Swiss-Prot
Match: PROSC_MOUSE (Proline synthetase co-transcribed bacterial homolog protein OS=Mus musculus GN=Prosc PE=1 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.882e-56
Identity = 125/254 (49.21%), Postives = 171/254 (67.32%), Query Frame = 2
Query:  113 RMAAPTVEGAAVTALRSVLHRVRQAAERSGRTQEQI--RVVAVSKTKPVSLIRQVYDAGHRSFGENYVQEIVDKA--PQLPE---DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLG-RKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 841
            R  + T E     ALR+V  RV+Q+  R  R    I  R+VAVSKTKP  ++ + Y  G R+FGENYVQE+++KA  P++     +IKWHF+GHLQ      L+  VPNL M+E V + K+A+ ++ +    G  +PLKV+VQ+NTSGE+SK G+ PS  + +VEH++  CP+LEF GLMTIG    D +  P  +F+ LL  R E+C+ LG+  +Q ELSMGMS DF+ AIE+GST+VRIGSTIFG R+Y+KK
Sbjct:    3 RGGSMTAELGVGFALRAVNERVQQSVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSSCPEIKWHFIGHLQKQNVNKLMA-VPNLSMLETVDSVKLADKVNSSWQKKGPTEPLKVMVQINTSGEDSKHGLLPSETIAVVEHIKASCPSLEFVGLMTIGSFGHDLSQGPNPDFQRLLTLRRELCEKLGIPVEQVELSMGMSMDFQHAIEVGSTNVRIGSTIFGERDYSKK 255          
BLAST of CK935792 vs. ExPASy Swiss-Prot
Match: PROSC_BOVIN (Proline synthetase co-transcribed bacterial homolog protein OS=Bos taurus GN=PROSC PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.476e-56
Identity = 123/241 (51.04%), Postives = 164/241 (68.05%), Query Frame = 2
Query:  152 ALRSVLHRVRQAAERSGRTQEQI--RVVAVSKTKPVSLIRQVYDAGHRSFGENYVQEIVDKA--PQLPE---DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 841
            ALR+V  RV+QA  R  R    I  R+VAVSKTKP  ++ + Y  G R+FGENYVQE+++KA  PQ+     +IKWHF+GHLQ      L+  VPNL M+E V + K+A+ ++ A    G  + LKV+VQ+NTSGE SK G+ P+    +VEH+  +CP+LEF GLMTIG    D +  P  +F+ LL+ R E+C+ LG   +Q ELSMGMS DF+ AIE+GST+VRIGSTIFG R+Y+KK
Sbjct:   16 ALRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYSHGQRTFGENYVQELLEKASNPQILSSCPEIKWHFIGHLQKQNVNKLMA-VPNLSMLETVDSVKLADKVNSAWQKKGSPERLKVMVQINTSGEASKHGLPPAEMAALVEHINAKCPSLEFVGLMTIGSFGHDLSQGPNPDFQVLLSLREELCRKLGAPPEQVELSMGMSVDFQHAIEVGSTNVRIGSTIFGERDYSKK 255          
BLAST of CK935792 vs. ExPASy Swiss-Prot
Match: PROSC_PONAB (Proline synthetase co-transcribed bacterial homolog protein OS=Pongo abelii GN=PROSC PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.220e-55
Identity = 125/254 (49.21%), Postives = 165/254 (64.96%), Query Frame = 2
Query:  113 RMAAPTVEGAAVTALRSVLHRVRQAAERSGRTQEQI--RVVAVSKTKPVSLIRQVYDAGHRSFGENYVQEIVDKAPQ-----LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 841
            R  + + E     ALR+V  RV+QA     R    I  R+VAVSKTKP  ++ + Y  G R+FGENYVQE+++KA       L  +IKWHF+GHLQ      L+  VPNL ++E V + K+A  ++ +    G  + LKV+VQ+NTSGEESK G+ PS  + IVEH+  +CPNLEF GLMTIG    D +  P  +F+ LL+ R E+CK L +  DQ ELSMGMS DF+ AIE+GST+VRIGS IFG R+Y+KK
Sbjct:    3 RAGSMSAELGVGCALRAVNERVQQAVALRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSLGPEIKWHFIGHLQKQNVNKLMA-VPNLFVLETVDSVKLAGKVNSSWQKKGSPERLKVMVQINTSGEESKHGLPPSETIAIVEHINAKCPNLEFVGLMTIGSFGHDLSQGPNPDFQLLLSLREELCKKLNIPADQVELSMGMSVDFQHAIEVGSTNVRIGSMIFGERDYSKK 255          
BLAST of CK935792 vs. ExPASy Swiss-Prot
Match: PROSC_DICDI (Proline synthetase co-transcribed bacterial homolog protein OS=Dictyostelium discoideum GN=prosc PE=3 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 1.142e-53
Identity = 117/248 (47.18%), Postives = 162/248 (65.32%), Query Frame = 2
Query:  146 VTALRSVLHRVRQAAERSGRTQEQIRVVAVSKTKPVSLIRQVYDAGHRSFGENYVQEIVDKAPQLPE--DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAV----------SNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRL--RCPN-LEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 844
            +++ +++  RV   + +  R    +++VAVSKTKP  +IR +YD GHR FGENY+QE+V K+ +L E  +IKWHF+G +QSNK+K +L  V NL +VE V N+KI + L K++          +N   K L +++QVNTSGEESKSG  P  CL +V+H      C N L F GLMTIG P+ T    +F+ L++C+  + K L +  D  ELSMGMS DFE AIE GSTSVR+GS IFG R+Y+ K+
Sbjct:   11 ISSYKNIKDRVEIISNKFDR--HNVKLVAVSKTKPTEMIRILYDKGHRHFGENYIQELVSKSEELSELNEIKWHFIGSIQSNKSK-ILTSVKNLYVVETVENKKILDKLAKSLLNNEENNNNNNNNNNKKLNIMIQVNTSGEESKSGCKPEECLDLVKHCLEDNNCKNSLNFLGLMTIGNPNATPDQPDFKCLVDCKNNISKQLNIPLDSIELSMGMSHDFEPAIEFGSTSVRVGSAIFGERDYSNKK 255          
BLAST of CK935792 vs. ExPASy Swiss-Prot
Match: PROSC_CAEEL (Proline synthetase co-transcribed bacterial homolog protein OS=Caenorhabditis elegans GN=F09E5.8 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.501e-42
Identity = 108/238 (45.38%), Postives = 137/238 (57.56%), Query Frame = 2
Query:  152 ALRSVLHRVRQAAERSGRTQEQIRVVAVSKTKPVSLIRQVYDAGHRSFGENYVQEIVDKAPQLPE---DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK--PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYT-STPEN--FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 841
            +L +++  V  A   S  T+ + R+VAVSKTK   LI   Y    R FGENYVQE+ +K+  L     DI+WHF+G +QSNK   +    P L  VE V  EK A   DK  S  G    PL+VLVQVNTSGE++K GI+      + E +R  C NL+F G MTIG  D + ++ EN  F  L   R    +  G + D  ELSMGMS DF QAI  G+TSVR+GS +FG REY  K
Sbjct:    9 SLFNIIEAVADAVTASQATK-RCRLVAVSKTKSADLIEACYSQNQRHFGENYVQELEEKSDVLASKCLDIRWHFIGQVQSNKIGKICNS-PGLWCVETVETEKHARIFDKEWSKHGANLSPLRVLVQVNTSGEDNKGGIEIGEAPKLAEFIRKECQNLKFDGFMTIGSFDNSHASGENPDFEKLFKVRQTWAEQTGESADSVELSMGMSDDFLQAIHQGATSVRVGSKLFGAREYKNK 244          
BLAST of CK935792 vs. ExPASy Swiss-Prot
Match: Y461_VIBCH (UPF0001 protein VC_0461 OS=Vibrio cholerae GN=VC_0461 PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.731e-39
Identity = 103/238 (43.28%), Postives = 140/238 (58.82%), Query Frame = 2
Query:  155 LRSVLHRVRQAAERSGRTQEQIRVVAVSKTKPVSLIRQVYDAGHRSFGENYVQEIVDKA-------PQLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTSTPENFRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 838
            +  +  ++  A ++ GR +  ++++AVSKTKPV  I +   AG R FGENYVQE VDK        PQL   ++WHF+G LQSNK + +     + D V  +  EKIA  L +    +   PL+VL+QVNTSGE SKSGI+P     + E +  R PNL   GLM+I   +PDY +    F  L    AE+ + L     Q + LSMGMSGD + AIE GST VRIG+ IFG R+Y++
Sbjct:    8 IEHITAQIESAQQKCGRARSSVQLLAVSKTKPVEAILEATQAGQRYFGENYVQEGVDKIRYFAEHHPQLA--LEWHFIGPLQSNKTRLV---AEHFDWVHTIDREKIALRLSEQ-RPVNMPPLQVLIQVNTSGEASKSGIEPQQLFTLAELIS-RLPNLTLRGLMSIPENVPDYPAQLAAFTQL----AELQQQLAQKYPQIDTLSMGMSGDMQAAIEAGSTIVRIGTAIFGERDYSR 234          
BLAST of CK935792 vs. ExPASy Swiss-Prot
Match: YPI1_VIBAL (UPF0001 protein in pilT-proC intergenic region OS=Vibrio alginolyticus PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.943e-38
Identity = 99/235 (42.13%), Postives = 135/235 (57.45%), Query Frame = 2
Query:  155 LRSVLHRVRQAAERSGRTQEQIRVVAVSKTKPVSLIRQVYDAGHRSFGENYVQEIVDKAPQLPED-----IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 835
            +  +  ++R   ++ GRT E ++++AVSKTKPV  I + Y AG  +FGENYVQE V K     E      I+WHF+G +QSNK++ +     + D V  +   KIA  L D+  S L  KPL+VL+QVNTSGE SKSG+  +    + E +  R PNL   GLM+I   + DY S    F+ L   +  +       +    LSMGMSGD   AIE GST VRIG+ IFG R+Y+
Sbjct:    8 IEHITSQIRYDEQKCGRTPESVQLLAVSKTKPVEAILEAYQAGQTAFGENYVQEGVSKVQHFAEHYPDNRIEWHFIGPIQSNKSRLV---AEHFDWVHTIDRTKIAQRLNDQRPSEL--KPLQVLIQVNTSGEASKSGVTEAEVFELAELIS-RLPNLTLRGLMSIPANVSDYESQLHEFQKLATLKQTLEAQFPEID---TLSMGMSGDMTAAIEAGSTMVRIGTAIFGARDYS 233          
BLAST of CK935792 vs. ExPASy Swiss-Prot
Match: YKC9_SCHPO (UPF0001 protein C644.09 OS=Schizosaccharomyces pombe GN=SPAC644.09 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.820e-36
Identity = 93/234 (39.74%), Postives = 137/234 (58.55%), Query Frame = 2
Query:  146 VTALRSVLHRVRQAAERSGRTQEQIRVVAVSKTKPVSLIRQVYDAGHRSFGENYVQEIVDKAPQLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE---NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 838
            ++ + S L  +R   ++S   +  + +VAVSK  PV  + + Y+AG R FGENY+QE + K   +P+D++WHF+G LQS+K K  +  V NL  +E +  EK A  ++ A   L + PL V +QVNTSGEE+K G+ PS  L + + V+     L   GLMTIG    +   +   +F+ L + R  +   LG+     +LSMGMS D+  AI+ GS SVR+GS+IFG R   K
Sbjct:    1 MSTIHSCLDLIRSQIQQSANGRN-VLLVAVSKFHPVETLMEAYNAGQRHFGENYMQEFLKKVELMPDDVQWHFIGSLQSSKCKK-IASVKNLYSIETIDTEKKARLVNSAREAL-QLPLNVYIQVNTSGEENKGGVTPSKVLELCKQVQ-DMKYLRLKGLMTIGSISNSQLSDHNPDFQVLSDLRESLQNELGI---PLQLSMGMSSDYLLAIKYGSDSVRVGSSIFGSRPTEK 227          
BLAST of CK935792 vs. ExPASy Swiss-Prot
Match: Y112_PASMU (UPF0001 protein PM0112 OS=Pasteurella multocida GN=PM0112 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.074e-35
Identity = 91/232 (39.22%), Postives = 136/232 (58.62%), Query Frame = 2
Query:  155 LRSVLHRVRQAAERSGRTQEQIRVVAVSKTKPVSLIRQVYDAGHRSFGENYVQEIVDKAPQLPE---DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 838
            L  +   ++ A +++ R +  ++++AVSKTKPV  I Q Y AG  +FGENYVQE V+K     +    ++WHF+G LQSNK K +     + D ++ +  +KIA+ L++   +  +KPL VL+Q+N S E+SKSGI P+  L + + ++   P+L   GLM I  P D  +T E   T ++   E  K          LSMGM+ D   AI+ GST VRIG+ IFG R+Y+K
Sbjct:    7 LAQIQQNIQHAVQQAKRPESAVKLLAVSKTKPVEDIYQAYQAGQTAFGENYVQEGVEKIQYFAQKNIPLEWHFIGPLQSNKTKLV---AEHFDWMQTLDRKKIADRLNEQRPHY-KKPLNVLIQINISDEDSKSGIQPNEMLDLAKQIQ-NLPHLCLRGLMAIPAPTDDLATQEQAFTQMHSLFEQLKQALPDAQIDTLSMGMTDDMASAIQCGSTMVRIGTAIFGARDYSK 233          
The following BLAST results are available for this feature:
BLAST of CK935792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
PROSC_HUMAN7.642e-5850.00Proline synthetase co-transcribed bacterial homolo... [more]
PROSC_MOUSE1.882e-5649.21Proline synthetase co-transcribed bacterial homolo... [more]
PROSC_BOVIN5.476e-5651.04Proline synthetase co-transcribed bacterial homolo... [more]
PROSC_PONAB1.220e-5549.21Proline synthetase co-transcribed bacterial homolo... [more]
PROSC_DICDI1.142e-5347.18Proline synthetase co-transcribed bacterial homolo... [more]
PROSC_CAEEL4.501e-4245.38Proline synthetase co-transcribed bacterial homolo... [more]
Y461_VIBCH2.731e-3943.28UPF0001 protein VC_0461 OS=Vibrio cholerae GN=VC_0... [more]
YPI1_VIBAL3.943e-3842.13UPF0001 protein in pilT-proC intergenic region OS=... [more]
YKC9_SCHPO4.820e-3639.74UPF0001 protein C644.09 OS=Schizosaccharomyces pom... [more]
Y112_PASMU1.074e-3539.22UPF0001 protein PM0112 OS=Pasteurella multocida GN... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004390_F02 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IVF_F02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935792 ID=CK935792; Name=CK935792; organism=Citrus sinensis; type=EST; length=867bp
GGGGATGATGATAAATTGAATAAAAATTGTTCTTATCCACGAAAATCGAA
AACAAGAAGAAAAAGGAAAAGAACAAGTGAAAAGGCTCAAAACACGTACA
CAAAAAGAAAGCAGAATGGCAGCTCCAACAGTCGAGGGAGCAGCTGTGAC
AGCGCTTCGCTCGGTGCTGCACCGGGTCCGACAGGCGGCGGAGCGGTCGG
GTCGGACTCAGGAACAGATACGGGTCGTGGCTGTATCGAAGACAAAACCG
GTTTCCCTGATTCGGCAAGTGTATGATGCTGGTCACCGTAGCTTTGGTGA
AAATTACGTACAAGAAATCGTTGATAAAGCTCCTCAGCTGCCAGAGGACA
TAAAGTGGCATTTTGTAGGGCATTTGCAGAGCAACAAAGCTAAAACTCTT
CTGGGTGGAGTGCCAAATCTGGACATGGTTGAGGGTGTTGGTAATGAGAA
GATTGCAAATCATCTTGACAAAGCTGTTTCAAACCTCGGAAGAAAGCCTT
TGAAGGTTTTGGTCCAAGTGAATACCAGTGGAGAAGAATCAAAATCAGGA
ATTGATCCTTCAAGTTGTCTAGGAATTGTGGAACATGTTAGACTGCGATG
CCCAAATTTGGAGTTTTCGGGCTTAATGACAATAGGGATGCCAGATTATA
CTTCAACTCCAGAGAACTTCAGGACTTTGTTGAATTGTAGAGCTGAGGTT
TGCAAGGCACTTGGAATGGCAGAGGATCAGTGTGAGCTATCGATGGGCAT
GTCTGGTGACTTTGAGCAAGCAATTGAAATGGGTAGTACCAGTGTGAGAA
TCGGATCAACGATATTTGGACCTAGGGAATATGCAAAGAAGCAGCAAAAT
TAATATCAGCTGTGCTG
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