CK935798

Overview
NameCK935798
Unique NameCK935798
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2505 contig Csv1_Contig2505:75..931. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935798 vs. ExPASy Swiss-Prot
Match: IDND_VITVI (L-idonate 5-dehydrogenase OS=Vitis vinifera GN=GSVIVT00012394001 PE=1 SV=2)

HSP 1 Score: 405.216 bits (1040), Expect = 2.376e-112
Identity = 195/254 (76.77%), Postives = 226/254 (88.98%), Query Frame = 1
Query:   97 MGKGGMSQGE---KKDGEEVNMAAWLMGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVFTNLQDIAEEVXKIQKAM 849
            MGKGG S+     K+ GEE NMAAWL+G+ TLKIQP+ LPSLGPYDV VR+KAVGICGSDVH+ KT+RCA+F+VK+PMVIGHECAG+IE+VGSEVK LV GDRVALEPGISC RC  C+ G+YNLC EMKFF +PP +GSLANQVVHP++LCFKLPDNVSLEEGAMCEPLSVG+HACRRAN+GPETNVLIMG+GPIGLVTML ARAFGAPRIV+VDVDD RL++AK+LGAD+I++V TN+QD+ EEV KIQ  M
Sbjct:    1 MGKGGNSEDAVSGKEHGEE-NMAAWLLGIKTLKIQPYILPSLGPYDVKVRIKAVGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKNLVAGDRVALEPGISCNRCSLCRNGQYNLCREMKFFGSPPTNGSLANQVVHPSNLCFKLPDNVSLEEGAMCEPLSVGIHACRRANVGPETNVLIMGSGPIGLVTMLAARAFGAPRIVLVDVDDQRLAIAKDLGADDIIRVSTNIQDLDEEVAKIQSTM 253          
BLAST of CK935798 vs. ExPASy Swiss-Prot
Match: DHSO_RAT (Sorbitol dehydrogenase OS=Rattus norvegicus GN=Sord PE=1 SV=4)

HSP 1 Score: 236.113 bits (601), Expect = 1.909e-61
Identity = 117/231 (50.65%), Postives = 162/231 (70.13%), Query Frame = 1
Query:  148 NMAAWLMGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVFTNL-QDIAEEVXKI 837
            N++  + G   ++++ + +P LGP DVL++M +VGICGSDVHY +  R  DFVVK+PMV+GHE AG + KVG  VK L PGDRVA+EPG+     + CK GRYNL P + F ATPP  G+L     H AD C+KLPD+V+ EEGA+ EPLSVG++ACRR ++     VL+ GAGPIG+VT+L A+A GA ++V++D+   RL+ AKE+GAD  ++V      DIA++V  +
Sbjct:    9 NLSLVVHGPGDIRLENYPIPELGPNDVLLKMHSVGICGSDVHYWEHGRIGDFVVKKPMVLGHEAAGTVTKVGPMVKHLKPGDRVAIEPGVPREIDEFCKIGRYNLTPSIFFCATPPDDGNLCRFYKHSADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPIGIVTLLVAKAMGASQVVVIDLSASRLAKAKEVGADFTIQVAKETPHDIAKKVESV 239          
BLAST of CK935798 vs. ExPASy Swiss-Prot
Match: DHSO_MOUSE (Sorbitol dehydrogenase OS=Mus musculus GN=Sord PE=1 SV=3)

HSP 1 Score: 234.187 bits (596), Expect = 7.256e-61
Identity = 116/231 (50.22%), Postives = 162/231 (70.13%), Query Frame = 1
Query:  148 NMAAWLMGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVFTNL-QDIAEEVXKI 837
            N++  + G   ++++ + +P LGP DVL++M +VGICGSDVHY +  R  DFVVK+PMV+GHE AG + KVG  VK L PGDRVA+EPG+     ++CK GRYNL P + F ATPP  G+L     H AD C+KLPD+V+ EEGA+ EPLSVG++ACRR ++     VL+ GAGP+G+VT+L A+A GA ++V+ D+   RL+ AKE+GAD  ++V     Q+IA +V  +
Sbjct:    9 NLSLVVHGPGDIRLENYPIPELGPNDVLLKMHSVGICGSDVHYWEHGRIGDFVVKKPMVLGHEAAGTVTKVGELVKHLKPGDRVAIEPGVPREVDEYCKIGRYNLTPTIFFCATPPDDGNLCRFYKHNADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPVGMVTLLVAKAMGAAQVVVTDLSASRLTKAKEVGADFTIQVGKETPQEIASKVESL 239          
BLAST of CK935798 vs. ExPASy Swiss-Prot
Match: DHSO_PONAB (Sorbitol dehydrogenase OS=Pongo abelii GN=SORD PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 9.476e-61
Identity = 118/228 (51.75%), Postives = 160/228 (70.18%), Query Frame = 1
Query:  148 NMAAWLMGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVF-TNLQDIAEEV 828
            N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+L     H A  C+KLPDNV+ EEGAM EPLSVG+HACRR  +     VL+ GAGPIG+VT+L A+A GA ++V+ D+   RLS AKE+GAD ++++   + Q+IA +V
Sbjct:    9 NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEDGRIGNFIVKKPMVLGHEASGTVEKVGSLVKHLKPGDRVAIEPGAPRENDEFCKIGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGAMIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKV 236          
BLAST of CK935798 vs. ExPASy Swiss-Prot
Match: DHSO_HUMAN (Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=1 SV=3)

HSP 1 Score: 233.802 bits (595), Expect = 9.476e-61
Identity = 117/228 (51.32%), Postives = 160/228 (70.18%), Query Frame = 1
Query:  148 NMAAWLMGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVF-TNLQDIAEEV 828
            N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG+VT+L A+A GA ++V+ D+   RLS AKE+GAD ++++   + Q+IA +V
Sbjct:    9 NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKV 236          
BLAST of CK935798 vs. ExPASy Swiss-Prot
Match: DHSO_BOVIN (Sorbitol dehydrogenase OS=Bos taurus GN=SORD PE=2 SV=3)

HSP 1 Score: 233.417 bits (594), Expect = 1.238e-60
Identity = 118/228 (51.75%), Postives = 162/228 (71.05%), Query Frame = 1
Query:  148 NMAAWLMGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVFT-NLQDIAEEV 828
            N++  + G   L+++ + +P  GP +VL++M +VGICGSDVHY +  R  DFVVK+PMV+GHE +G + KVGS V+ L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+L     H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA +     VL+ GAGPIGLV++L A+A GA ++V+ D+   RLS AKE+GAD I+++   + Q+IA++V
Sbjct:    8 NLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVLGHEASGTVVKVGSLVRHLQPGDRVAIEPGAPRETDEFCKIGRYNLSPTIFFCATPPDDGNLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVSLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILQISNESPQEIAKKV 235          
BLAST of CK935798 vs. ExPASy Swiss-Prot
Match: DHSO_MACFA (Sorbitol dehydrogenase OS=Macaca fascicularis GN=SORD PE=2 SV=3)

HSP 1 Score: 232.646 bits (592), Expect = 2.111e-60
Identity = 116/228 (50.88%), Postives = 161/228 (70.61%), Query Frame = 1
Query:  148 NMAAWLMGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVF-TNLQDIAEEV 828
            N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+GHE +G +EKVGS VK L PGDRVA+EPG+     + CK GRYNL P + F ATPP  G+L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG+V++L A+A GA ++V+ D+   RLS AKE+GAD ++++   + Q+IA +V
Sbjct:    9 NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEEGRIGNFIVKKPMVLGHEASGTVEKVGSLVKHLKPGDRVAIEPGVPRENDEFCKSGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHRVLVCGAGPIGVVSLLVAKAMGAAQVVVTDLSAPRLSKAKEIGADLVLQISKESPQEIAGKV 236          
BLAST of CK935798 vs. ExPASy Swiss-Prot
Match: DHSO_SHEEP (Sorbitol dehydrogenase OS=Ovis aries GN=SORD PE=1 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 5.200e-59
Identity = 116/228 (50.88%), Postives = 161/228 (70.61%), Query Frame = 1
Query:  148 NMAAWLMGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVFT-NLQDIAEEV 828
            N++  + G   L+++ + +P  GP +VL++M +VGICGSDVHY +  R  DFVVK+PMV+GHE +G + KVGS V+ L PGDRVA++PG      + CK GRYNL P + F ATPP  G+L     H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA +     VL+ GAGPIGLV +L A+A GA ++V+ D+   RLS AKE+GAD I+++   + ++IA++V
Sbjct:    7 NLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQG-RIGDFVVKKPMVLGHEASGTVVKVGSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCATPPDDGNLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVNLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEISNESPEEIAKKV 233          
BLAST of CK935798 vs. ExPASy Swiss-Prot
Match: DHSO_BACSU (Sorbitol dehydrogenase OS=Bacillus subtilis GN=gutB PE=1 SV=3)

HSP 1 Score: 219.935 bits (559), Expect = 1.416e-56
Identity = 103/233 (44.21%), Postives = 150/233 (64.38%), Query Frame = 1
Query:  154 AAWLMGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVFTNLQDIAEEVXKIQKAMG 852
            AA +     +KI+   +P +   +VL+++ AVGICGSD+HY    R  ++VV++P ++GHECAG I  VGS V     GDRVA+EPG++C RC+ CK GRYNLCP+++F ATPPV G+    +    D  F +PD++S EE A+ EP SVG+HA  R  + P + + IMG GP+GL+ +  A+AFGA  I++ D++  RL  AK++GA +I+ +    QD  EE+  I    G
Sbjct:   11 AAVMHNTREIKIETLPVPDINHDEVLIKVMAVGICGSDLHYYTNGRIGNYVVEKPFILGHECAGEIAAVGSSVDQFKVGDRVAVEPGVTCGRCEACKEGRYNLCPDVQFLATPPVDGAFVQYIKMRQDFVFLIPDSLSYEEAALIEPFSVGIHAAARTKLQPGSTIAIMGMGPVGLMAVAAAKAFGAGTIIVTDLEPLRLEAAKKMGATHIINI--REQDALEEIKTITNDRG 241          
BLAST of CK935798 vs. ExPASy Swiss-Prot
Match: DHSO_BOMMO (Sorbitol dehydrogenase OS=Bombyx mori GN=SDH PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.116e-52
Identity = 105/235 (44.68%), Postives = 149/235 (63.40%), Query Frame = 1
Query:  148 NMAAWLMGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVFTNLQDIAEEVXKIQKAMG 852
            N AA L G N ++I+   +P +   +VL+++  VGICGSDV    T  C   V+ +P+VIGHE AG + KVG +V +L  GDRVA+EP   C  C+ CK G+YNLC E ++ ++    G+L     H AD C KLPDN+++EEGA  +PL++ +HAC RA I   + ++I+GAGPIG++  + A+A GA +I++ DV   RL  A ELGADN++ V     D  E V KI K +G
Sbjct:    4 NYAAVLHGANDVRIEKIPVPEINDDEVLIKIDCVGICGSDVKLYSTGTCGADVIDKPIVIGHEGAGTVVKVGDKVSSLRVGDRVAIEPTQPCRSCELCKRGKYNLCVEPRYCSSMGAPGNLCRYYKHVADFCHKLPDNLTMEEGAAVQPLAIVIHACNRAKITLGSKIVILGAGPIGILCAMSAKAMGASKIILTDVVQSRLDAALELGADNVLLVRREYTD-EEVVEKIVKLLG 237          
The following BLAST results are available for this feature:
BLAST of CK935798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 320
Match NameE-valueIdentityDescription
IDND_VITVI2.376e-11276.77L-idonate 5-dehydrogenase OS=Vitis vinifera GN=GSV... [more]
DHSO_RAT1.909e-6150.65Sorbitol dehydrogenase OS=Rattus norvegicus GN=Sor... [more]
DHSO_MOUSE7.256e-6150.22Sorbitol dehydrogenase OS=Mus musculus GN=Sord PE=... [more]
DHSO_PONAB9.476e-6151.75Sorbitol dehydrogenase OS=Pongo abelii GN=SORD PE=... [more]
DHSO_HUMAN9.476e-6151.32Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=... [more]
DHSO_BOVIN1.238e-6051.75Sorbitol dehydrogenase OS=Bos taurus GN=SORD PE=2 ... [more]
DHSO_MACFA2.111e-6050.88Sorbitol dehydrogenase OS=Macaca fascicularis GN=S... [more]
DHSO_SHEEP5.200e-5950.88Sorbitol dehydrogenase OS=Ovis aries GN=SORD PE=1 ... [more]
DHSO_BACSU1.416e-5644.21Sorbitol dehydrogenase OS=Bacillus subtilis GN=gut... [more]
DHSO_BOMMO2.116e-5244.68Sorbitol dehydrogenase OS=Bombyx mori GN=SDH PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004390_E03 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IVF_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935798 ID=CK935798; Name=CK935798; organism=Citrus sinensis; type=EST; length=857bp
GGGGATCCAGAATCAGAATAAATGGTAGCTTAAAATGTTGTGTACAGAGT
GAAGTCTCTTCTGTGCACTTGTGTTTTTGAAGGGTAAAAAGCAAATATGG
GCAAAGGAGGGATGTCACAAGGAGAAAAGAAGGATGGAGAAGAAGTTAAC
ATGGCAGCTTGGCTTATGGGTGTCAACACCCTCAAGATTCAACCTTTTGA
GCTTCCTTCTCTGGGACCATATGATGTTTTAGTCAGGATGAAAGCCGTTG
GTATTTGTGGAAGTGATGTGCATTATCTCAAGACCTTGAGGTGTGCCGAT
TTTGTTGTGAAAGAGCCTATGGTGATTGGGCACGAGTGTGCTGGGGTCAT
AGAGAAGGTGGGAAGCGAGGTGAAGACTTTGGTGCCCGGTGACCGTGTGG
CCCTGGAACCCGGGATCAGCTGCTGGCGATGCGATCACTGCAAAGGAGGT
CGATACAATTTGTGTCCAGAGATGAAATTTTTTGCAACTCCGCCCGTTCA
TGGTTCCCTGGCTAATCAGGTGGTGCATCCTGCAGACCTATGTTTTAAGC
TGCCGGACAATGTGAGCCTGGAGGAAGGGGCTATGTGTGAGCCCTTGAGT
GTTGGTCTTCATGCCTGCCGCCGTGCCAATATCGGTCCTGAGACAAATGT
GCTTATCATGGGAGCAGGGCCCATAGGACTTGTCACAATGCTAGGAGCTC
GTGCTTTTGGAGCTCCTAGAATTGTCATTGTGGATGTGGATGACTATCGT
TTATCTGTTGCAAAGGAACTTGGTGCAGATAATATTGTTAAAGTTTTCAC
AAATTTGCAGGACATAGCTGAAGAAGTNNNNAAGATACAGAAAGCCATGG
GGANNNN
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