EY756596

Overview
NameEY756596
Unique NameEY756596
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length530
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY756596_ssr307 microsatellite EY756596_ssr307:307..318. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig6384 contig Csv1_Contig6384:467..997. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756596 vs. ExPASy Swiss-Prot
Match: Y5516_ARATH (Probable receptor kinase At5g05160 OS=Arabidopsis thaliana GN=At5g05160 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.798e-27
Identity = 61/90 (67.78%), Postives = 74/90 (82.22%), Query Frame = 1
Query:    4 RVRVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQ-----QPELRNRASSGTESNV 258
            RV +DLPRWVRSVVREEWTAEVFDVELLK+Q++EEEMVQMLQ+AL+CVA+ P+SRPKM++V RMIE ++     Q   +NR SS   SNV
Sbjct:  549 RVVIDLPRWVRSVVREEWTAEVFDVELLKFQNIEEEMVQMLQLALACVARNPESRPKMEEVARMIEDVRRLDQSQQLQQNRTSSEATSNV 638          
BLAST of EY756596 vs. ExPASy Swiss-Prot
Match: Y5830_ARATH (Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana GN=At5g58300 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 9.952e-25
Identity = 51/81 (62.96%), Postives = 69/81 (85.19%), Query Frame = 1
Query:   13 VDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRNRASSGTESN 255
            VDLPRWV+SVVREEWT+EVFD+EL+++Q++EEEMVQMLQIA++CVA+VP+ RP MDDVVRMIE+I+  +      S  +++
Sbjct:  565 VDLPRWVQSVVREEWTSEVFDIELMRFQNIEEEMVQMLQIAMACVAQVPEVRPTMDDVVRMIEEIRVSDSETTRPSSDDNS 645          
BLAST of EY756596 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 9.314e-23
Identity = 47/69 (68.12%), Postives = 60/69 (86.96%), Query Frame = 1
Query:   13 VDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 219
            +DLPRWV SVVREEWTAEVFDVEL++Y ++EEEMVQ+LQIA++CV+ VPD RP M +V+RMIE + + E
Sbjct:  555 IDLPRWVLSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMACVSTVPDQRPVMQEVLRMIEDVNRSE 623          
BLAST of EY756596 vs. ExPASy Swiss-Prot
Match: Y3868_ARATH (Probable inactive receptor kinase At3g08680 OS=Arabidopsis thaliana GN=At3g08680 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.589e-22
Identity = 55/81 (67.90%), Postives = 67/81 (82.72%), Query Frame = 1
Query:   13 VDLPRWVRSVVREEWTAEVFDVELLKYQ-DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ----PELRNRASS 240
            VDLP+WV+SVVREEWT EVFDVEL+K Q +VEEEMVQMLQIA++CV+K PDSRP M++VV M+E+I+     P   NRASS
Sbjct:  549 VDLPKWVQSVVREEWTGEVFDVELIKQQHNVEEEMVQMLQIAMACVSKHPDSRPSMEEVVNMMEEIRPSGSGPGSGNRASS 629          
BLAST of EY756596 vs. ExPASy Swiss-Prot
Match: Y4374_ARATH (Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana GN=At4g23740 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.075e-22
Identity = 52/93 (55.91%), Postives = 67/93 (72.04%), Query Frame = 1
Query:   13 VDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI--------QQPELRNRASSGTESNVQTP 267
            + L RWV SVVREEWTAEVFD+ELL+Y ++EEEMV+MLQIA+SCV K  D RPKM D+VR+IE +         +PEL+ ++ +G  S   TP
Sbjct:  544 IHLVRWVHSVVREEWTAEVFDIELLRYTNIEEEMVEMLQIAMSCVVKAADQRPKMSDLVRLIENVGNRRTSIEPEPELKPKSENGA-SETSTP 635          
BLAST of EY756596 vs. ExPASy Swiss-Prot
Match: Y5332_ARATH (Probable inactive receptor kinase At5g53320 OS=Arabidopsis thaliana GN=At5g53320 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.392e-18
Identity = 46/83 (55.42%), Postives = 60/83 (72.29%), Query Frame = 1
Query:   16 DLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRNRASSGTESNVQT 264
            +L RWV SVVREEWT EVFD ELL+   VEEEMV+MLQ+ + C A++P+ RP M +VVRM+E+I+  +L    +SG  S V T
Sbjct:  506 NLVRWVNSVVREEWTGEVFDEELLRCTQVEEEMVEMLQVGMVCTARLPEKRPNMIEVVRMVEEIRPEKL----ASGYRSEVST 584          
BLAST of EY756596 vs. ExPASy Swiss-Prot
Match: Y1848_ARATH (Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.051e-14
Identity = 36/67 (53.73%), Postives = 48/67 (71.64%), Query Frame = 1
Query:   13 VDLPRWVRSVVREEWTAEVFDVELLKY-QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQ 210
            VDLPRWV+SV R+EW  EVFD ELL    D EE M +M+Q+ L C ++ PD RP+M +VVR +E ++
Sbjct:  577 VDLPRWVKSVARDEWRREVFDSELLSLATDEEEMMAEMVQLGLECTSQHPDQRPEMSEVVRKMENLR 643          
BLAST of EY756596 vs. ExPASy Swiss-Prot
Match: Y5168_ARATH (Probably inactive receptor-like protein kinase At5g41680 OS=Arabidopsis thaliana GN=At5g41680 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 7.903e-14
Identity = 34/65 (52.31%), Postives = 47/65 (72.31%), Query Frame = 1
Query:   13 VDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 207
            +DL  W+RSVV +EWT EVFD EL+    +EEE+V+MLQI L+CVA  P  RP +  +V++I+ I
Sbjct:  289 MDLASWIRSVVSKEWTGEVFDNELMMQMGIEEELVEMLQIGLACVALKPQDRPHITHIVKLIQDI 353          
BLAST of EY756596 vs. ExPASy Swiss-Prot
Match: RLK90_ARATH (Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana GN=RLK902 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.300e-13
Identity = 36/70 (51.43%), Postives = 48/70 (68.57%), Query Frame = 1
Query:   13 VDLPRWVRSVVREEWTAEVFDVELLKYQ---DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 213
            +DL RWV SV REEW  EVFD EL+  +    VEEEM +MLQ+ + C  + PD RP M +VVR I++++Q
Sbjct:  571 MDLARWVHSVAREEWRNEVFDSELMSIETVVSVEEEMAEMLQLGIDCTEQHPDKRPVMVEVVRRIQELRQ 640          
BLAST of EY756596 vs. ExPASy Swiss-Prot
Match: Y5659_ARATH (Probable inactive receptor kinase At5g16590 OS=Arabidopsis thaliana GN=At5g16590 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.691e-13
Identity = 37/82 (45.12%), Postives = 54/82 (65.85%), Query Frame = 1
Query:   13 VDLPRWVRSVVREEWTAEVFDVELLKYQ-DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRNRASSGTESN 255
            VDLPRWV S+  ++  ++VFD EL +YQ D  E M+++L I +SC  + PDSRP M +V R+IE++     R+ AS G  S+
Sbjct:  548 VDLPRWVSSITEQQSPSDVFDPELTRYQSDSNENMIRLLNIGISCTTQYPDSRPTMPEVTRLIEEVS----RSPASPGPLSD 625          
The following BLAST results are available for this feature:
BLAST of EY756596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
Y5516_ARATH2.798e-2767.78Probable receptor kinase At5g05160 OS=Arabidopsis ... [more]
Y5830_ARATH9.952e-2562.96Probable inactive receptor kinase At5g58300 OS=Ara... [more]
Y2267_ARATH9.314e-2368.12Probable inactive receptor kinase At2g26730 OS=Ara... [more]
Y3868_ARATH1.589e-2267.90Probable inactive receptor kinase At3g08680 OS=Ara... [more]
Y4374_ARATH2.075e-2255.91Probable inactive receptor kinase At4g23740 OS=Ara... [more]
Y5332_ARATH1.392e-1855.42Probable inactive receptor kinase At5g53320 OS=Ara... [more]
Y1848_ARATH6.051e-1453.73Probable inactive receptor kinase At1g48480 OS=Ara... [more]
Y5168_ARATH7.903e-1452.31Probably inactive receptor-like protein kinase At5... [more]
RLK90_ARATH2.300e-1351.43Probable inactive receptor kinase RLK902 OS=Arabid... [more]
Y5659_ARATH6.691e-1345.12Probable inactive receptor kinase At5g16590 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-D07-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756596 ID=EY756596; Name=EY756596; organism=Citrus sinensis; type=EST; length=530bp
CCACGCGTCCGGGTTGATCTTCCAAGATGGGTCCGTTCTGTTGTTCGCGA
GGAATGGACAGCCGAGGTGTTTGATGTTGAGCTACTGAAGTACCAAGATG
TTGAAGAGGAGATGGTGCAGATGCTACAGATTGCATTGTCATGTGTAGCA
AAGGTCCCAGACTCTAGGCCAAAAATGGATGACGTTGTTAGAATGATAGA
ACAAATTCAACAACCTGAGTTGAGGAACAGGGCATCTTCTGGAACTGAAT
CTAATGTCCAAACACCCTGATTGCTTTGAACATTTTGCATTATGCTTCAA
GCCAACTTTGTTTGTTTGTTCAATAACCATGTTGAGCTAAGATACATTTG
TATGTTGGGCCATTCTCCCTGAATTCGTTGAATTAGTGAATTTCAAATTC
AGCTTGTGGTACTATTTTTTTTATTTTTTATTTTTTGTAAATATGTGTGT
AACTGTTGTGCTTACTTTGGAAAATATTGCAGCTGCCTCATACTCACTCA
TTCATATTTAATATATGGCGCCCATTGTTN
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