EY739384

Overview
NameEY739384
Unique NameEY739384
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9798 contig Csv1_Contig9798:1..850. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY739384 vs. ExPASy Swiss-Prot
Match: CP20B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic OS=Arabidopsis thaliana GN=CYP20-2 PE=1 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.406e-67
Identity = 121/166 (72.89%), Postives = 141/166 (84.94%), Query Frame = 1
Query:  328 VRASAEV-SDLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVXMANAGPNTNGSQFFICTVKTPWLNQRHVVFGPILEGMDIVNRTESPETERG 822
            V+++AEV ++ QSK+T+KVYFD+S+GNPVGKLAGRIVIGLYGDDVPQT ENFRALCTGEKGFGYKGSTFHRVI+DFMIQ             S+YGRTFKDENFKLSH+GPGV+ MANAGPNTNGSQFFICT+KT WL+ RHVVFG ++EGM++V   E  ET+RG
Sbjct:   74 VQSNAEVVTEPQSKITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIEGMEVVKLIEEQETDRG 239          
BLAST of EY739384 vs. ExPASy Swiss-Prot
Match: CP20C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thaliana GN=CYP20-3 PE=1 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.782e-54
Identity = 103/165 (62.42%), Postives = 124/165 (75.15%), Query Frame = 1
Query:  319 RSLVRASAEVSDLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVXMANAGPNTNGSQFFICTVKTPWLNQRHVVFGPILEGMDIVNRTESPET 813
            +S+     EV + Q+KVTNKVYFDV IG   G++AGRIV+GL+G+ VP+T ENFRALCTGEK +GYKGS+FHR+IKDFMIQ             SIYG  F+DENF L H GPG++ MANAGPNTNGSQFFICTVKT WL+ +HVVFG ++EGM +V   ES ET
Sbjct:   77 KSMAAEEEEVIEPQAKVTNKVYFDVEIG---GEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLESQET 238          
BLAST of EY739384 vs. ExPASy Swiss-Prot
Match: CYPB_VICFA (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.668e-52
Identity = 97/162 (59.88%), Postives = 123/162 (75.93%), Query Frame = 1
Query:  334 ASAEVSDLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVXMANAGPNTNGSQFFICTVKTPWLNQRHVVFGPILEGMDIVNRTESPETER 819
            A  EV++LQ+KVT+K++FD+ IG   G+ AGRIVIGL+GD VP+T ENF+ L TG KG+GY+GS FHR+I +FMIQ             SIYG  F+DE+F L H+GPGV+ MANAGPNTNGSQFFICTV TPWL+ RHVVFG ++EG+D+V + ES ET +
Sbjct:   69 AQGEVAELQAKVTSKIFFDIEIG---GESAGRIVIGLFGDAVPKTVENFKTLSTGAKGYGYQGSFFHRIIPNFMIQGGDFTEGNGTGGVSIYGSKFEDESFDLKHVGPGVLSMANAGPNTNGSQFFICTVPTPWLDNRHVVFGHVIEGLDVVKQLESQETSK 227          
BLAST of EY739384 vs. ExPASy Swiss-Prot
Match: PPIB_CRYNE (Peptidyl-prolyl cis-trans isomerase B OS=Cryptococcus neoformans GN=CPR2 PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 2.110e-47
Identity = 96/158 (60.76%), Postives = 113/158 (71.52%), Query Frame = 1
Query:  367 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEK------GFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVXMANAGPNTNGSQFFICTVKTPWLNQRHVVFGPILEGMDIVNRTESPETERG 822
            +TNKVYFD+  G   GK  GRIV+GLYG  VP+TAENFRAL TG+       G+GY+GS+FHR+IK+FMIQ             SIYG  F DENFKL H GPGV+ MANAG +TNGSQFFICTVKT WL+ RHVVFG +LEGMD+V   E+ +T RG
Sbjct:   43 ITNKVYFDIEHG---GKPLGRIVMGLYGKTVPKTAENFRALATGKNSDGEDLGYGYEGSSFHRIIKNFMIQGGDFTKGDGTGGKSIYGSKFPDENFKLKHTGPGVLSMANAGRDTNGSQFFICTVKTAWLDNRHVVFGHVLEGMDVVYAMENVKTSRG 197          
BLAST of EY739384 vs. ExPASy Swiss-Prot
Match: PPIB_ORPSP (Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) GN=CYPB PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.756e-47
Identity = 95/153 (62.09%), Postives = 110/153 (71.90%), Query Frame = 1
Query:  364 KVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVXMANAGPNTNGSQFFICTVKTPWLNQRHVVFGPILEGMDIVNRTESPETERG 822
            KVTNKVYFD+  G+   K  GRIV+GLYG+ VP+T ENFRAL TGEKG+GYK S FHRVIKDFMIQ             SIYG  F DENFKL H GPG++ MANAG +TNGSQFFI TV T WL+ RHVVFG ++EGMD+V   E+ +T  G
Sbjct:   27 KVTNKVYFDIKQGD---KDLGRIVLGLYGEVVPKTVENFRALATGEKGYGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFADENFKLRHTGPGILSMANAGRDTNGSQFFITTVTTSWLDGRHVVFGKVIEGMDVVTAIETTKTLPG 176          
BLAST of EY739384 vs. ExPASy Swiss-Prot
Match: PPIF_HUMAN (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Homo sapiens GN=PPIF PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.599e-47
Identity = 97/175 (55.43%), Postives = 113/175 (64.57%), Query Frame = 1
Query:  298 PTRKMGTRSLVRASAEVSDLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVXMANAGPNTNGSQFFICTVKTPWLNQRHVVFGPILEGMDIVNRTESPETERG 822
            P R    R+  + S + S   S     VY DV      GK  GR+V+ L  D VP+TAENFRALCTGEKGFGYKGSTFHRVI  FM Q             SIYG  F DENF L H+GPGV+ MANAGPNTNGSQFFICT+KT WL+ +HVVFG + EGMD+V + ES  ++ G
Sbjct:   21 PLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDAN---GKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSG 192          
BLAST of EY739384 vs. ExPASy Swiss-Prot
Match: PPIB_MOUSE (Peptidyl-prolyl cis-trans isomerase B OS=Mus musculus GN=Ppib PE=2 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 3.047e-46
Identity = 93/151 (61.59%), Postives = 108/151 (71.52%), Query Frame = 1
Query:  364 KVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVXMANAGPNTNGSQFFICTVKTPWLNQRHVVFGPILEGMDIVNRTESPETE 816
            KVT KVYFD+ IG+   +  GR+V GL+G  VP+T +NF AL TGEKGFGYK S FHRVIKDFMIQ             SIYG  F DENFKL H GPG V MANAG +TNGSQFFI TVKT WL+ +HVVFG +LEGMD+V + ES +T+
Sbjct:   41 KVTVKVYFDLQIGD---ESVGRVVFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKVESTKTD 188          
BLAST of EY739384 vs. ExPASy Swiss-Prot
Match: PPIB_CHICK (Peptidyl-prolyl cis-trans isomerase B OS=Gallus gallus GN=PPIB PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.047e-46
Identity = 93/151 (61.59%), Postives = 110/151 (72.85%), Query Frame = 1
Query:  364 KVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVXMANAGPNTNGSQFFICTVKTPWLNQRHVVFGPILEGMDIVNRTESPETE 816
            KVT KV+FD+ +G    + AGR+VIGL+G  VP+T ENF AL TGEKGFG+KGS FHRVIKDFMIQ             SIYG  F DENFKL H GPG V MANAG +TNGSQFFI TVKT WL+ +HVVFG +LEGMD+V + E+ +T+
Sbjct:   32 KVTAKVFFDLRVGE---EDAGRVVIGLFGKTVPKTVENFVALATGEKGFGFKGSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGDRFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMDVVRKVENTKTD 179          
BLAST of EY739384 vs. ExPASy Swiss-Prot
Match: PPIB_BOVIN (Peptidyl-prolyl cis-trans isomerase B OS=Bos taurus GN=PPIB PE=1 SV=4)

HSP 1 Score: 185.267 bits (469), Expect = 3.979e-46
Identity = 94/151 (62.25%), Postives = 109/151 (72.19%), Query Frame = 1
Query:  364 KVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVXMANAGPNTNGSQFFICTVKTPWLNQRHVVFGPILEGMDIVNRTESPETE 816
            KVT KVYFD+ IG+   +  GR+VIGL+G  VP+T +NF AL TGEKGFGYK S FHRVIKDFMIQ             SIYG  F DENFKL H GPG V MANAG +TNGSQFFI TVKT WL+ +HVVFG +LEGMD+V + ES +T+
Sbjct:   41 KVTVKVYFDLRIGD---EDIGRVVIGLFGKTVPKTVDNFVALATGEKGFGYKDSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMDVVRKVESTKTD 188          
BLAST of EY739384 vs. ExPASy Swiss-Prot
Match: PPIB_EMENI (Peptidyl-prolyl cis-trans isomerase B OS=Emericella nidulans GN=cpr2 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 8.865e-46
Identity = 91/147 (61.90%), Postives = 108/147 (73.47%), Query Frame = 1
Query:  364 KVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVXMANAGPNTNGSQFFICTVKTPWLNQRHVVFGPILEGMDIVNRTES 804
            K+TNKVYFD+  G+   +  GRIV+GLYG  VP+TAENFRAL TGEKGFGY+GS FHRVIKDFMIQ             SIYG  FKDENFKL H   G++ MANAG +TNGSQFFI T  TPWL+ +HVVFG +LEG DIV++ ++
Sbjct:   31 KITNKVYFDIQHGD---ESLGRIVLGLYGKTVPETAENFRALATGEKGFGYEGSNFHRVIKDFMIQGGDFTRGDGTGGKSIYGAKFKDENFKLRHTKTGLLSMANAGKDTNGSQFFITTAVTPWLDGKHVVFGEVLEGYDIVDKIQN 174          
The following BLAST results are available for this feature:
BLAST of EY739384 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
CP20B_ARATH1.406e-6772.89Peptidyl-prolyl cis-trans isomerase CYP20-2, chlor... [more]
CP20C_ARATH1.782e-5462.42Peptidyl-prolyl cis-trans isomerase CYP20-3, chlor... [more]
CYPB_VICFA1.668e-5259.88Peptidyl-prolyl cis-trans isomerase, chloroplastic... [more]
PPIB_CRYNE2.110e-4760.76Peptidyl-prolyl cis-trans isomerase B OS=Cryptococ... [more]
PPIB_ORPSP2.756e-4762.09Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyc... [more]
PPIF_HUMAN3.599e-4755.43Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIB_MOUSE3.047e-4661.59Peptidyl-prolyl cis-trans isomerase B OS=Mus muscu... [more]
PPIB_CHICK3.047e-4661.59Peptidyl-prolyl cis-trans isomerase B OS=Gallus ga... [more]
PPIB_BOVIN3.979e-4662.25Peptidyl-prolyl cis-trans isomerase B OS=Bos tauru... [more]
PPIB_EMENI8.865e-4661.90Peptidyl-prolyl cis-trans isomerase B OS=Emericell... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-056-F09-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY739384 ID=EY739384; Name=EY739384; organism=Citrus sinensis; type=EST; length=870bp
CACGCGTCCGCTTCTTAGCTCTTATCTATCGGTAGTAACAATCTTTTATC
TGAATCTCTCCACACACCGACTCTGAGGCACTTGTCCATTCCATCAATGG
CGGCAGCGGCTTCATTCGCAGCCCAAATAAATGTAAGCTGGGTCTCAGGC
CCACTTCAACTGAACAAAGCTCTCAGTCCCTCGCGTAATGCAATCGAGAT
ACCCAGAAAATCTTCTTCATTCCTATCAAATGCTTCATCATCCTGCTCCA
GCTTCTTCTCCCGTCCGTTGACTCCCGTTCCCCCTCTCACTCATTTTCCC
ACCAGGAAAATGGGTACGCGTAGCCTTGTTCGGGCCAGTGCTGAGGTATC
TGATTTACAATCGAAAGTTACCAATAAAGTTTATTTCGATGTGAGCATTG
GGAATCCAGTAGGAAAGCTTGCTGGAAGAATCGTGATTGGATTGTACGGT
GATGATGTGCCCCAAACGGCAGAGAACTTCCGTGCTTTATGCACAGGAGA
GAAGGGCTTTGGTTACAAAGGTTCCACATTCCATCGTGTTATCAAAGATT
TCATGATCCAAGGAGGAGACTTTGATAAAGGCAATGGAACTGGAGGTAAA
AGTATATACGGCCGTACATTCAAAGATGAGAACTTCAAATTGTCGCATAT
TGGACCAGGAGTAGTTANTATGGCAAATGCAGGTCCCAACACTAATGGCA
GCCAATTTTTCATTTGTACGGTCAAGACCCCATGGCTAAATCAGAGGCAT
GTTGTCTTTGGGCCAATTTTGGAGGGCATGGACATTGTAAACCGTACTGA
GTCACCGGAAACTGAGAGGGGCCACGGCCTGCAAAGAAGGTGGTCCTAAT
AAATGCGGGCGACTCCCATG
back to top