EY739378

Overview
NameEY739378
Unique NameEY739378
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: YGL4_SCHPO (Uncharacterized protein C216.04c OS=Schizosaccharomyces pombe GN=SPBC216.04c PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.159e-24
Identity = 54/112 (48.21%), Postives = 67/112 (59.82%), Query Frame = 2
Query:  116 PERNRAARNWGVQQVVCG---------WVYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDPDG--RRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIK 418
            PE+ R  R  G +    G          V+ CA C   LYK+ TKF+S CGWPAF++ LPG + R  D      R E  CA CGGHLGH+FKGEG+  PTDERHC+NS S++
Sbjct:   18 PEKYRIMRQKGTEHPGAGRFTHQFPKQGVFVCAACKELLYKASTKFESHCGWPAFFDNLPGKVKRIEDNSYGMHRVEAVCANCGGHLGHIFKGEGYSNPTDERHCINSASLE 129          
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: YCD3_YEAST (Uncharacterized protein YCL033C OS=Saccharomyces cerevisiae GN=YCL033C PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.908e-23
Identity = 51/88 (57.95%), Postives = 57/88 (64.77%), Query Frame = 2
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGL-PGAINRSPDPD--GRRTEITCAACGGHLGHVFKGEGFK----TPTDERHCVNSVSI 415
            VY+CA C   LY S  KFD+ CGWPAFYE + PGAI    D      R EI CA CGGHLGHVF+GEG+K     P D RHCVNS S+
Sbjct:   76 VYHCANCDRPLYSSKAKFDARCGWPAFYEEVSPGAITYHRDNSLMPARVEICCARCGGHLGHVFEGEGWKQLLNLPKDTRHCVNSASL 163          

HSP 2 Score: 29.6462 bits (65), Expect = 2.908e-23
Identity = 13/34 (38.24%), Postives = 18/34 (52.94%), Query Frame = 3
Query:   51 SVQKTEEEWRAILSPEQFRILRQKGTEPRGTGEY 152
            S +  + +W   L+P Q  +LR K TE   TG Y
Sbjct:   35 SDESNDVKWNDALTPLQLMVLRDKATERPNTGAY 68          
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_PSEFS (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas fluorescens (strain SBW25) GN=msrB PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.021e-23
Identity = 40/88 (45.45%), Postives = 50/88 (56.82%), Query Frame = 2
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAIN---RSPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIP 427
            VY+C  C   L+ S TKFDSGCGWP+FY  +  +     R       RTE+TCA C  HLGHVF       PT  R+C+NSV +  +P
Sbjct:   44 VYHCICCNAPLFDSTTKFDSGCGWPSFYAPIADSAMVEIRDVSHGMIRTEVTCAKCDAHLGHVFPDG--PPPTGLRYCINSVCLDLVP 129          

HSP 2 Score: 48.1358 bits (113), Expect = 5.021e-23
Identity = 20/42 (47.62%), Postives = 29/42 (69.05%), Query Frame = 3
Query:   48 DSVQKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADG 173
            + +QKT +EW+A+L PEQ+ + R KGTE   +G+YN    DG
Sbjct:    2 EKLQKTVDEWKAMLDPEQYNVCRLKGTERPFSGKYNATKTDG 43          
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_PSEU2 (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas syringae pv. syringae (strain B728a) GN=msrB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.478e-23
Identity = 39/88 (44.32%), Postives = 49/88 (55.68%), Query Frame = 2
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAI---NRSPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIP 427
            +Y+C  C   L+ S TKFDSGCGWP+FY  L  +     R       RTE+ CA C  HLGHVF       PT  R+C+NSV +  +P
Sbjct:   44 IYHCICCDEPLFDSTTKFDSGCGWPSFYAPLENSAVIEVRDMSHGMIRTEVVCAKCDAHLGHVFPDG--PPPTGLRYCINSVCLDLVP 129          

HSP 2 Score: 49.6766 bits (117), Expect = 8.478e-23
Identity = 21/42 (50.00%), Postives = 30/42 (71.43%), Query Frame = 3
Query:   48 DSVQKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADG 173
            D +QKT EEW+ +L PEQ+ + R KGTE   +G+Y+K+  DG
Sbjct:    2 DKLQKTLEEWKQMLDPEQYNVCRLKGTERPFSGKYDKVKTDG 43          
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_PSE14 (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=msrB PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.436e-22
Identity = 41/88 (46.59%), Postives = 50/88 (56.82%), Query Frame = 2
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAI---NRSPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIP 427
            VY+C  C   L+ S TKFDSGCGWP+FY  L G+     R       RTE+ CA C  HLGHVF       PT  R+C+NSV +  +P
Sbjct:   44 VYHCICCNEPLFDSTTKFDSGCGWPSFYAPLEGSAVVEVRDVSHGMIRTEVVCAKCDAHLGHVFPDG--PPPTGLRYCINSVCLDLVP 129          

HSP 2 Score: 45.8246 bits (107), Expect = 1.436e-22
Identity = 19/42 (45.24%), Postives = 29/42 (69.05%), Query Frame = 3
Query:   48 DSVQKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADG 173
            D +QKT EEW+ +L P Q+++ R KGTE   +G+YN+   +G
Sbjct:    2 DKLQKTLEEWKEMLDPAQYQVCRLKGTERPFSGKYNETKTEG 43          
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_PSESM (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas syringae pv. tomato GN=msrB PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.868e-22
Identity = 42/88 (47.73%), Postives = 52/88 (59.09%), Query Frame = 2
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAI---NRSPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIP 427
            VY+C  C  AL+ S TKFDSGCGWP+FY  L G+     R       RTE+ CA C  HLGHVF       PT  R+C+NSV ++ +P
Sbjct:   44 VYHCICCNEALFDSTTKFDSGCGWPSFYAPLEGSAVVEVRDVSHGMIRTEVVCARCDAHLGHVFPDG--PPPTGLRYCINSVCLELVP 129          

HSP 2 Score: 42.743 bits (99), Expect = 1.868e-22
Identity = 18/36 (50.00%), Postives = 25/36 (69.44%), Query Frame = 3
Query:   48 DSVQKTEEEWRAILSPEQFRILRQKGTEPRGTGEYN 155
            D +QKT EEW+ +L P Q+ + R KGTE   +G+YN
Sbjct:    2 DKLQKTLEEWKEMLDPAQYSVCRLKGTERPFSGKYN 37          
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_PSEE4 (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas entomophila (strain L48) GN=msrB PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.116e-22
Identity = 42/90 (46.67%), Postives = 50/90 (55.56%), Query Frame = 2
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAIN---RSPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIPGD 433
            VY+C  C   L+ S  KFDSGCGWP+FYE +  A     R       RTE+TCA C  HLGHVF       PT  R+C+NSV +   P D
Sbjct:   44 VYHCICCDLPLFDSKAKFDSGCGWPSFYEPIEEAAMIEIRDTSHGMIRTEVTCAQCDAHLGHVFPDG--PPPTGLRYCINSVCLDLKPRD 131          

HSP 2 Score: 45.8246 bits (107), Expect = 4.116e-22
Identity = 21/49 (42.86%), Postives = 30/49 (61.22%), Query Frame = 3
Query:   54 VQKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFTTVLAVEL 200
            + KT EEWRA+L P Q+++ R KGTE   +G+YN    DG    +  +L
Sbjct:    4 IDKTLEEWRAMLDPAQYQVCRLKGTERPFSGKYNSERRDGVYHCICCDL 52          
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_PSEF5 (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=msrB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.373e-22
Identity = 39/88 (44.32%), Postives = 49/88 (55.68%), Query Frame = 2
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAIN---RSPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIP 427
            VY+C  C   L+ S  KFDSGCGWP+FYE +  +     R       RTE+ CA C  HLGHVF       PT  R+C+NSV +  +P
Sbjct:   44 VYHCICCNEPLFDSKAKFDSGCGWPSFYEPIADSAMVEIRDMSHGMIRTEVVCAKCDAHLGHVFPDG--PPPTGLRYCINSVCLDLVP 129          

HSP 2 Score: 47.3654 bits (111), Expect = 5.373e-22
Identity = 20/42 (47.62%), Postives = 29/42 (69.05%), Query Frame = 3
Query:   48 DSVQKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADG 173
            + ++KT EEWR++L PEQ+ + R KGTE   +G+YN    DG
Sbjct:    2 EKLEKTLEEWRSMLDPEQYNVCRLKGTERPFSGKYNGTKTDG 43          
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_LEIXX (Peptide methionine sulfoxide reductase msrB OS=Leifsonia xyli subsp. xyli GN=msrB PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.032e-22
Identity = 56/118 (47.46%), Postives = 71/118 (60.17%), Query Frame = 2
Query:  113 TPERNRAARNWGVQQVVCG--------WVYNCAGCGTALYKSVTKFDSGCGWPAFYEGL-PGAINRSPDP--DGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIPGD 433
            TPE+    R  G +Q   G         VY CA CG  L++S TKFDSGCGWP+FYE + P A+    D      RTE+ CA CG HLGHVF  +GF+TPT +R+C+NS+S+   P D
Sbjct:   22 TPEQYGVLRQAGTEQPWTGELLDESRAGVYACAACGAELFRSGTKFDSGCGWPSFYESVRPEAVELLEDTRLGITRTEVRCANCGSHLGHVFP-DGFRTPTGDRYCMNSISLDFQPED 138          
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_PSEPF (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas fluorescens (strain Pf0-1) GN=msrB PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.535e-21
Identity = 40/88 (45.45%), Postives = 50/88 (56.82%), Query Frame = 2
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGL-PGAINRSPDPDGR--RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIP 427
            VY+C  C   L+ S TKFDSGCGWP+FY  +   A+    D      RTE+ CA C  HLGHVF       PT  R+C+NSV +  +P
Sbjct:   44 VYHCICCNEPLFDSKTKFDSGCGWPSFYAPIGDNAMTEIRDTSHGMIRTEVKCAKCDAHLGHVFPDG--PPPTGLRYCINSVCLDLVP 129          

HSP 2 Score: 46.595 bits (109), Expect = 1.535e-21
Identity = 20/42 (47.62%), Postives = 27/42 (64.29%), Query Frame = 3
Query:   48 DSVQKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADG 173
            + ++KT EEWRA+L PEQF + R   TE   +G+YN    DG
Sbjct:    2 EKIEKTLEEWRAMLDPEQFNVCRLSATERPFSGKYNATKTDG 43          
The following BLAST results are available for this feature:
BLAST of EY739378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
YGL4_SCHPO1.159e-2448.21Uncharacterized protein C216.04c OS=Schizosaccharo... [more]
YCD3_YEAST2.908e-2357.95Uncharacterized protein YCL033C OS=Saccharomyces c... [more]
MSRB_PSEFS5.021e-2345.45Peptide methionine sulfoxide reductase msrB OS=Pse... [more]
MSRB_PSEU28.478e-2344.32Peptide methionine sulfoxide reductase msrB OS=Pse... [more]
MSRB_PSE141.436e-2246.59Peptide methionine sulfoxide reductase msrB OS=Pse... [more]
MSRB_PSESM1.868e-2247.73Peptide methionine sulfoxide reductase msrB OS=Pse... [more]
MSRB_PSEE44.116e-2246.67Peptide methionine sulfoxide reductase msrB OS=Pse... [more]
MSRB_PSEF55.373e-2244.32Peptide methionine sulfoxide reductase msrB OS=Pse... [more]
MSRB_LEIXX7.032e-2247.46Peptide methionine sulfoxide reductase msrB OS=Lei... [more]
MSRB_PSEPF1.535e-2145.45Peptide methionine sulfoxide reductase msrB OS=Pse... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-056-F01-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY739378 ID=EY739378; Name=EY739378; organism=Citrus sinensis; type=EST; length=886bp
CCACGCGTCCGAAAAGATTGAAACCAAACCCCATGACTGCAGCAGCAGAT
TCCGTTCAGAAAACCGAGGAAGAATGGCGGGCCATTCTCTCCCCCGAGCA
GTTTAGGATTCTACGCCAGAAAGGAACCGAGCCGCGAGGAACTGGGGAGT
ACAACAAGTTGTATGCGGATGGGTTTACAACTGTGCTGGCTGTGGAACTG
CGCTTTACAAGTCTGTTACCAAATTCGATTCTGGATGTGGGTGGCCAGCT
TTCTATGAAGGTCTTCCTGGAGCCATAAATCGCTCCCCTGATCCTGATGG
AAGGAGAACCGAGATAACTTGTGCTGCTTGCGGGGGTCACTTGGGTCACG
TCTTCAAAGGGGAGGGATTCAAAACGCCTACAGATGAACGCCACTGTGTC
AATAGTGTGTCAATTAAGTGTATTCCAGGTGATGCTCCTGCTTCATCATG
AAGAATGTAAGACTGTCATGGGGGTTGTTGAATAAGATTTGACTGTTTGT
CACTTCTGCCAATTGTTTTTGGCTTTAATGTCCTAGACATGGTGTTGTGT
GTATAATGATTACGCGGGCGATATTAGCCTATGCCATAGTATAAACCACT
TTGTGTGGTTTGGACGGGGGGGCGGGGCGGGGGGGAGGGGGGGGGGGAAG
GGGCGGCCGGTCAAGAGGAATCAGGCTTACGTGGGGGTGGTGGGGAGGGG
GAGCTGGTCTCATGTGTTACCTGAGTGCGATTCGGTGGGCGGTCGTGTGG
AGAGGTTGGGGCCGGGGAAAGCGGGGGGGTTGCCCGGGCGGGGGCGGGGG
GGGGGGGAGGTCGCTTTTGGGGAGGGGGGGGTTATGGGGGAGTGGGGGGG
TTGAGGTGGGCGTCGGGGGGGGGGTGGGGGGGGGGT
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