EY739262
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY739262 vs. ExPASy Swiss-Prot
Match: CHLP_ARATH (Geranylgeranyl diphosphate reductase, chloroplastic OS=Arabidopsis thaliana GN=CHLP PE=1 SV=1) HSP 1 Score: 363.614 bits (932), Expect = 1.150e-107 Identity = 179/203 (88.18%), Postives = 189/203 (93.10%), Query Frame = 2 Query: 62 WVGVPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVXYRSNPAREAFVEMCADEYVQKMTFDSYLYKKVVPGNPLEDLKLAVNTIGTLVTAYSLRKGIGXLDV 670 WV PKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+EGS+NG +MIDEGDLRKYLEKWDKTY PTY+VLDVLQKV YRSNPAREAFVEMC DEYVQKMTFDSYLYK+V PG+PLED+KLAVNTIG+LV A +LR+ I L V Sbjct: 266 WV-FPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSKRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSQNGKKMIDEGDLRKYLEKWDKTYLPTYRVLDVLQKVFYRSNPAREAFVEMCNDEYVQKMTFDSYLYKRVAPGSPLEDIKLAVNTIGSLVRANALRREIEKLSV 467 HSP 2 Score: 48.1358 bits (113), Expect = 1.150e-107 Identity = 20/22 (90.91%), Postives = 21/22 (95.45%), Query Frame = 3 Query: 12 ENLAEMYVGDDVSPDFYGWVSP 77 E+LAEMYVGDDVSPDFYGWV P Sbjct: 248 EDLAEMYVGDDVSPDFYGWVFP 269
BLAST of EY739262 vs. ExPASy Swiss-Prot
Match: CHLP_TOBAC (Geranylgeranyl diphosphate reductase, chloroplastic OS=Nicotiana tabacum GN=CHLP PE=2 SV=1) HSP 1 Score: 357.066 bits (915), Expect = 2.800e-106 Identity = 175/203 (86.21%), Postives = 183/203 (90.15%), Query Frame = 2 Query: 62 WVGVPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVXYRSNPAREAFVEMCADEYVQKMTFDSYLYKKVVPGNPLEDLKLAVNTIGTLVTAYSLRKGIGXLDV 670 WV PKCDHVAVGTGTVTHK DIKKFQLATR RA KI GGKIIRVEAHPIPEHPRPRRL RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+EGSE G RM+DE DLRKYLEKWDKTYWPTYKVLD+LQKV YRSNPAREAFVEMCADEYVQKMTFDSYLYKKV PGNP+EDLKLAVNTIG+LV A +LR+ + L V Sbjct: 263 WV-FPKCDHVAVGTGTVTHKADIKKFQLATRLRADSKITGGKIIRVEAHPIPEHPRPRRLQDRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSEMGKRMVDESDLRKYLEKWDKTYWPTYKVLDILQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKKVAPGNPIEDLKLAVNTIGSLVRANALRREMDKLSV 464 HSP 2 Score: 50.0618 bits (118), Expect = 2.800e-106 Identity = 21/22 (95.45%), Postives = 21/22 (95.45%), Query Frame = 3 Query: 12 ENLAEMYVGDDVSPDFYGWVSP 77 ENLAEMYVGDDVSPDFYGWV P Sbjct: 245 ENLAEMYVGDDVSPDFYGWVFP 266
BLAST of EY739262 vs. ExPASy Swiss-Prot
Match: CHLP_ORYSJ (Geranylgeranyl diphosphate reductase, chloroplastic OS=Oryza sativa subsp. japonica GN=CHLP PE=2 SV=1) HSP 1 Score: 335.495 bits (859), Expect = 2.001e-98 Identity = 161/196 (82.14%), Postives = 180/196 (91.84%), Query Frame = 2 Query: 62 WVGVPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVXYRSNPAREAFVEMCADEYVQKMTFDSYLYKKVVPGNPLEDLKLAVNTIGTLVTAYSLRK 649 WV PKCDHVAVGTGTVTHK DIKKFQ ATR RAKD+I GGKIIRVEAHPIPEHPRP+R++GRV LVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+ GS NGTRM++E DLR+YL ++D+ YWPTYKVLDVLQKV YRSN AREAFVEMCAD+YVQ+MTFDSYLYK+VVPGNPL+D+KLAVNTIG+LV A +LR+ Sbjct: 262 WV-FPKCDHVAVGTGTVTHKPDIKKFQAATRLRAKDRIEGGKIIRVEAHPIPEHPRPKRVAGRVTLVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVAGSANGTRMVEESDLRRYLAEFDRLYWPTYKVLDVLQKVFYRSNAAREAFVEMCADDYVQRMTFDSYLYKRVVPGNPLDDIKLAVNTIGSLVRATALRR 456 HSP 2 Score: 45.4394 bits (106), Expect = 2.001e-98 Identity = 19/22 (86.36%), Postives = 19/22 (86.36%), Query Frame = 3 Query: 12 ENLAEMYVGDDVSPDFYGWVSP 77 E AEMYVGDDVSPDFYGWV P Sbjct: 244 EERAEMYVGDDVSPDFYGWVFP 265
BLAST of EY739262 vs. ExPASy Swiss-Prot
Match: CHLP_SYNY3 (Geranylgeranyl diphosphate reductase OS=Synechocystis sp. (strain PCC 6803) GN=chlP PE=3 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 4.183e-64 Identity = 124/195 (63.59%), Postives = 148/195 (75.90%), Query Frame = 2 Query: 62 WVGVPKCDHVAVGTGTV-THKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVXYRSNPAREAFVEMCADEYVQKMTFDSYLYKKVVPGNPLEDLKLAVNTIGTLVTAYSL 643 WV PK DHVAVGTGT+ +K IK Q R RA K+ GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS RMCAE I+ S NG R+ E DL++Y+++WDK Y TY VLD+LQ+V YR++ REAFVEMC+D VQK+TFDSYLYK VVP NPL +K+ TIG+L+ +L Sbjct: 212 WV-FPKYDHVAVGTGTMKVNKARIKDLQAGIRTRAAKKLEGGEIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSARMCAETIVATSNNGQRVPTEADLKQYIKQWDKRYGATYLVLDILQRVFYRTDATREAFVEMCSDIDVQKLTFDSYLYKTVVPANPLVQMKITAKTIGSLLRGNAL 405
BLAST of EY739262 vs. ExPASy Swiss-Prot
Match: BCHP_RHOCA (Geranylgeranyl diphosphate reductase OS=Rhodobacter capsulatus GN=bchP PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 2.690e-21 Identity = 67/189 (35.45%), Postives = 94/189 (49.74%), Query Frame = 2 Query: 62 WVGVPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVXYRSNPAREAFVEMCADEYVQKMTFDSYLYKKVVPGNPLEDLKLAVNTIGTL 625 WV P ++G GT D+ T R + + IR E PIP P +G+ V L GDAAG V SGEGIY+A GR AEA + ++G DL+ + K + +KVL ++Q Y S+ RE FV +C D VQ+MTF+SY+ KK+ PL++LK+ + L Sbjct: 201 WV-FPHGKTASIGMGT--ELPDVSLKDCTTLLRQMSGLDKEETIRKEGAPIPLQPLDVWDNGKDVVLSGDAAGVVAPSSGEGIYYAHAGGRYAAEAAMAFLKSGK----PADLKLARAGFMKEHGTVFKVLRMMQDKYYHSDDRRERFVSLCHDVDVQRMTFESYMNKKMTKFQPLKNLKIGFKNLAHL 382 HSP 2 Score: 29.261 bits (64), Expect = 2.690e-21 Identity = 10/18 (55.56%), Postives = 13/18 (72.22%), Query Frame = 3 Query: 24 EMYVGDDVSPDFYGWVSP 77 ++Y +SPDFYGWV P Sbjct: 187 DVYYDGRISPDFYGWVFP 204 The following BLAST results are available for this feature:
BLAST of EY739262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY739262 ID=EY739262; Name=EY739262; organism=Citrus sinensis; type=EST; length=865bpback to top |