EY736163

Overview
NameEY736163
Unique NameEY736163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: AB14C_ARATH (ABC transporter C family member 14 OS=Arabidopsis thaliana GN=ABCC14 PE=1 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 2.844e-93
Identity = 151/205 (73.66%), Postives = 166/205 (80.98%), Query Frame = 3
Query:    9 RPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREGV--CCLYNYQH 617
            RPPPNWP  GN+ L D++VRYR NTPLVLKG+T+ I GGEKIGVVGRTGSGKSTLIQV FRLVEPS                   RSRFGIIPQEPVLFEGTVRSNIDP  +YSDEEIWKSLERCQLKDVVA+KP+KLDSLVAD+G+NWSVGQRQLLCLGRVMLK SR+LF+DEATASVDSQTDA IQ+IIRE    C + +  H
Sbjct: 1286 RPPPNWPYKGNIRLEDVKVRYRPNTPLVLKGLTIDIKGGEKIGVVGRTGSGKSTLIQVLFRLVEPSGGKIIIDGIDICTLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTEKYSDEEIWKSLERCQLKDVVASKPEKLDSLVADNGENWSVGQRQLLCLGRVMLKRSRILFLDEATASVDSQTDAMIQKIIREDFSDCTIISIAH 1490          

HSP 2 Score: 67.3958 bits (163), Expect = 2.844e-93
Identity = 33/49 (67.35%), Postives = 39/49 (79.59%), Query Frame = 1
Query:  601 CTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSLSAASVEE 747
            CTIISIAHRIPTVMDCD+ +V+DA  AKE   P +LLE+ SL AA V+E
Sbjct: 1483 CTIISIAHRIPTVMDCDRVLVIDAGKAKEYDSPVRLLERQSLFAALVQE 1531          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: AB4C_ARATH (ABC transporter C family member 4 OS=Arabidopsis thaliana GN=ABCC4 PE=1 SV=2)

HSP 1 Score: 298.901 bits (764), Expect = 2.470e-80
Identity = 154/204 (75.49%), Postives = 163/204 (79.90%), Query Frame = 3
Query:   12 PPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE--GVCCLYNYQH 617
            PP NWP HGNV L DL+VRYR NTPLVLKGITL I GGEK+GVVGRTGSGKSTLIQV FRLVEPS                   RSRFGIIPQEPVLFEGTVRSNIDP  QYSDEEIWKSLERCQLKDVVA KP+KLDSLV D+G+NWSVGQRQLLCLGRVMLK SRLLF+DEATASVDSQTDA IQ+IIRE    C + +  H
Sbjct: 1264 PPSNWPFHGNVHLEDLKVRYRPNTPLVLKGITLDIKGGEKVGVVGRTGSGKSTLIQVLFRLVEPSGGKIIIDGIDISTLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTEQYSDEEIWKSLERCQLKDVVATKPEKLDSLVVDNGENWSVGQRQLLCLGRVMLKRSRLLFLDEATASVDSQTDAVIQKIIREDFASCTIISIAH 1467          

HSP 2 Score: 68.9366 bits (167), Expect = 4.180e-11
Identity = 34/51 (66.67%), Postives = 42/51 (82.35%), Query Frame = 1
Query:  595 AACTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSLSAASVEE 747
            A+CTIISIAHRIPTVMD D+ +V+DA  AKE   P++LLE+PSL AA V+E
Sbjct: 1458 ASCTIISIAHRIPTVMDGDRVLVIDAGKAKEFDSPARLLERPSLFAALVQE 1508          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: AB8C_ARATH (ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=2)

HSP 1 Score: 230.335 bits (586), Expect = 5.766e-67
Identity = 111/194 (57.22%), Postives = 142/194 (73.20%), Query Frame = 3
Query:    9 RPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSL-VADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587
            RPP +WP++G + L +L++RYR N PLVLKGI+ +   G ++GVVGRTGSGKSTLI   FRLVEP+                   R +  IIPQEP LF G +R+N+DP+G YSD+EIWK+LE+CQLK  ++  P+KLDS  V+D G+NWSVGQRQL CLGRV+LK +++L +DEATAS+DS TDA IQRIIRE
Sbjct: 1034 RPPSSWPSNGTIHLQELKIRYRPNAPLVLKGISCTFREGTRVGVVGRTGSGKSTLISALFRLVEPASGCILIDGIDISKIGLKDLRMKLSIIPQEPTLFRGCIRTNLDPLGVYSDDEIWKALEKCQLKTTISNLPNKLDSSEVSDEGENWSVGQRQLFCLGRVLLKRNKILVLDEATASIDSATDAIIQRIIRE 1227          

HSP 2 Score: 46.2098 bits (108), Expect = 5.766e-67
Identity = 23/53 (43.40%), Postives = 33/53 (62.26%), Query Frame = 1
Query:  589 ESAACTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSLSAASVEE 747
            E A CT+I++AHR+PTV+D D  +V+      E  EPS+L+E  S  +  V E
Sbjct: 1228 EFADCTVITVAHRVPTVIDSDMVMVLSFGDLVEYNEPSKLMETDSYFSKLVAE 1280          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: AB10C_ARATH (ABC transporter C family member 10 OS=Arabidopsis thaliana GN=ABCC10 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.278e-66
Identity = 110/192 (57.29%), Postives = 136/192 (70.83%), Query Frame = 3
Query:    9 RPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIR 584
            RPP NWP  G V++ DLQ+RYR  +PLVLKGI+ +  GG KIG+VGRTGSGK+TLI   FRLVEP                    RSRFGIIPQ+P LF GTVR N+DP+ Q+SD EIW+ L +CQLK+VV  K + LDSLV + G NWS+GQRQL CLGR +L+ SR+L +DEATAS+D+ TD  +Q+ IR
Sbjct: 1132 RPPVNWPVTGRVEISDLQIRYRRESPLVLKGISCTFEGGHKIGIVGRTGSGKTTLISALFRLVEPVGGKIVVDGVDISKIGVHDLRSRFGIIPQDPTLFNGTVRFNLDPLCQHSDAEIWEVLGKCQLKEVVQEKENGLDSLVVEDGSNWSMGQRQLFCLGRAVLRRSRVLVLDEATASIDNATDLILQKTIR 1323          

HSP 2 Score: 48.9062 bits (115), Expect = 1.278e-66
Identity = 27/69 (39.13%), Postives = 39/69 (56.52%), Query Frame = 1
Query:  577 SFERESAACTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLL-EKPSLSAASVEELPNHTIKLDER 780
            +  RE A CT+I++AHRIPTVMDC   + +      E  EP +L+ ++ SL    V+E  +H    D R
Sbjct: 1321 TIRREFADCTVITVAHRIPTVMDCTMVLSISDGRIVEYDEPMKLMKDENSLFGKLVKEYWSHYNSADSR 1389          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: AB9C_ARATH (ABC transporter C family member 9 OS=Arabidopsis thaliana GN=ABCC9 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 9.132e-59
Identity = 110/193 (56.99%), Postives = 139/193 (72.02%), Query Frame = 3
Query:    9 RPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587
            RP  NWP  G++   DLQVRY  + P VLK IT    GG+KIGVVGRTGSGKSTLIQ  FR+VEPS                   RSR GIIPQ+P LF+GT+R N+DP+ QY+D EIW+++++CQL DV+ AK ++LD+ V ++G+NWSVGQRQL+CLGRV+LK S +L +DEATASVDS TD  IQ+II +
Sbjct: 1228 RPLDNWPNVGSIVFRDLQVRYAEHFPAVLKNITCEFPGGKKIGVVGRTGSGKSTLIQALFRIVEPSQGTIVIDNVDITKIGLHDLRSRLGIIPQDPALFDGTIRLNLDPLAQYTDHEIWEAIDKCQLGDVIRAKDERLDATVVENGENWSVGQRQLVCLGRVLLKKSNILVLDEATASVDSATDGVIQKIINQ 1420          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: AB15C_ARATH (Putative ABC transporter C family member 15 OS=Arabidopsis thaliana GN=ABCC15 PE=5 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 2.034e-58
Identity = 111/193 (57.51%), Postives = 139/193 (72.02%), Query Frame = 3
Query:    9 RPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587
            RP  NWP  G++   DLQVRY  + P VLK IT +  GG+KIGVVGRTGSGKSTLIQ  FR+VEPS                   RSR GIIPQ+  LF+GT+R N+DP+ QY+D EIW++L++CQL DV+ AK +KLD+ V ++G+NWSVGQRQL+CLGRV+LK S +L +DEATASVDS TD  IQ+II +
Sbjct:  775 RPLDNWPNVGSIVFRDLQVRYAEHFPAVLKNITCAFPGGKKIGVVGRTGSGKSTLIQALFRIVEPSHGTIVIDNVDITKIGLHDLRSRLGIIPQDNALFDGTIRLNLDPLAQYTDREIWEALDKCQLGDVIRAKDEKLDATVVENGENWSVGQRQLVCLGRVLLKKSNILVLDEATASVDSATDGVIQKIINQ 967          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: AB3C_ARATH (ABC transporter C family member 3 OS=Arabidopsis thaliana GN=ABCC3 PE=1 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 1.010e-57
Identity = 109/211 (51.66%), Postives = 148/211 (70.14%), Query Frame = 3
Query:    9 RPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREGVCCLYNYQHCSQDTHSH 641
            RP  +WP+ G V++ DLQVRY  + PLVL+GIT +  GG + G+VGRTGSGKSTLIQ  FR+VEPS                   R R  IIPQ+P +FEGT+RSN+DP+ +Y+D++IW++L++CQL D V  K  KLDS V+++GDNWS+GQRQL+CLGRV+LK S++L +DEATASVD+ TD  IQ+ +RE      ++  C+  T +H
Sbjct: 1258 RPEQSWPSRGEVEIRDLQVRYAPHMPLVLRGITCTFKGGLRTGIVGRTGSGKSTLIQTLFRIVEPSAGEIRIDGVNILTIGLHDLRLRLSIIPQDPTMFEGTMRSNLDPLEEYTDDQIWEALDKCQLGDEVRKKEQKLDSSVSENGDNWSMGQRQLVCLGRVLLKRSKILVLDEATASVDTATDNLIQKTLRE------HFSDCTVITIAH 1462          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: AB5C_ARATH (ABC transporter C family member 5 OS=Arabidopsis thaliana GN=ABCC5 PE=2 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 2.938e-57
Identity = 109/211 (51.66%), Postives = 148/211 (70.14%), Query Frame = 3
Query:    9 RPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREGVCCLYNYQHCSQDTHSH 641
            RPP +WPA G ++L+D++VRY  N P VL G++    GG+KIG+VGRTGSGKSTLIQ  FRL+EP+                   RSR GIIPQ+P LFEGT+R+N+DP+ ++SD++IW++L++ QL DVV  K  KLDS V ++GDNWSVGQRQL+ LGR +LK +++L +DEATASVD+ TD  IQ+IIR        ++ C+  T +H
Sbjct: 1257 RPPSSWPATGTIELVDVKVRYAENLPTVLHGVSCVFPGGKKIGIVGRTGSGKSTLIQALFRLIEPTAGKITIDNIDISQIGLHDLRSRLGIIPQDPTLFEGTIRANLDPLEEHSDDKIWEALDKSQLGDVVRGKDLKLDSPVLENGDNWSVGQRQLVSLGRALLKQAKILVLDEATASVDTATDNLIQKIIRT------EFEDCTVCTIAH 1461          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: AB7C_ARATH (ABC transporter C family member 7 OS=Arabidopsis thaliana GN=ABCC7 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.234e-55
Identity = 105/211 (49.76%), Postives = 144/211 (68.25%), Query Frame = 3
Query:    9 RPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREGVCCLYNYQHCSQDTHSH 641
            RP  +WP  G + + +LQVRY  + P+VL+G+T +  GG K G+VGRTG GKSTLIQ  FR+VEP+                   RSR  IIPQEP +FEGTVRSN+DP+ +Y+D++IW++L++CQL D +  K  KLDS V+++G NWSVGQRQL+CLGRV+LK S++L +DEATASVD+ TD  IQ  +R+      ++  C+  T +H
Sbjct: 1230 RPEKSWPCRGEITICNLQVRYGPHLPMVLRGLTCTFRGGLKTGIVGRTGCGKSTLIQTLFRIVEPAAGEIRIDGINILTIGLHDLRSRLSIIPQEPTMFEGTVRSNLDPLEEYADDQIWEALDKCQLGDEIRKKELKLDSPVSENGQNWSVGQRQLVCLGRVLLKRSKVLILDEATASVDTATDTLIQETLRQ------HFSGCTVITIAH 1434          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: AB2C_ARATH (ABC transporter C family member 2 OS=Arabidopsis thaliana GN=ABCC2 PE=1 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 3.257e-55
Identity = 93/193 (48.19%), Postives = 129/193 (66.84%), Query Frame = 3
Query:    9 RPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587
            RPPP WP+ G++   D+ +RYR   P VL G++  IH  +K+G+VGRTG+GKS+L+   FR+VE                     R   GIIPQ PVLF GTVR N+DP G+++D ++W+SLER  LKD +   P  LD+ V+++G+N+SVGQRQLL L R +L+ S++L +DEATA+VD +TDA IQ+ IRE
Sbjct: 1231 RPPPGWPSSGSIKFEDVVLRYRPQLPPVLHGVSFFIHPTDKVGIVGRTGAGKSSLLNALFRIVEVEKGRILIDDCDVGKFGLMDLRKVLGIIPQSPVLFSGTVRFNLDPFGEHNDADLWESLERAHLKDTIRRNPLGLDAEVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIRE 1423          

HSP 2 Score: 44.2838 bits (103), Expect = 3.257e-55
Identity = 19/51 (37.25%), Postives = 30/51 (58.82%), Query Frame = 1
Query:  577 SFERESAACTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSLS 729
            +   E  +CT++ IAHR+ T++DCDK +V+D+   +E   P  LL     S
Sbjct: 1420 TIREEFKSCTMLIIAHRLNTIIDCDKILVLDSGRVQEFSSPENLLSNEGSS 1470          
The following BLAST results are available for this feature:
BLAST of EY736163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 452
Match NameE-valueIdentityDescription
AB14C_ARATH2.844e-9373.66ABC transporter C family member 14 OS=Arabidopsis ... [more]
AB4C_ARATH2.470e-8075.49ABC transporter C family member 4 OS=Arabidopsis t... [more]
AB8C_ARATH5.766e-6757.22ABC transporter C family member 8 OS=Arabidopsis t... [more]
AB10C_ARATH1.278e-6657.29ABC transporter C family member 10 OS=Arabidopsis ... [more]
AB9C_ARATH9.132e-5956.99ABC transporter C family member 9 OS=Arabidopsis t... [more]
AB15C_ARATH2.034e-5857.51Putative ABC transporter C family member 15 OS=Ara... [more]
AB3C_ARATH1.010e-5751.66ABC transporter C family member 3 OS=Arabidopsis t... [more]
AB5C_ARATH2.938e-5751.66ABC transporter C family member 5 OS=Arabidopsis t... [more]
AB7C_ARATH1.234e-5549.76ABC transporter C family member 7 OS=Arabidopsis t... [more]
AB2C_ARATH3.257e-5548.19ABC transporter C family member 2 OS=Arabidopsis t... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-012-F12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736163 ID=EY736163; Name=EY736163; organism=Citrus sinensis; type=EST; length=874bp
CACGCGTCCGTCCACCTCCAAATTGGCCTGCTCATGGCAATGTGGACCTC
ATAGACTTGCAGGTCAGATATCGCTCCAACACTCCTCTGGTTCTCAAAGG
TATTACACTCAGCATTCACGGGGGAGAGAAGATTGGTGTAGTTGGGCGTA
CAGGAAGTGGGAAGTCAACTTTAATTCAAGTTTTCTTTAGGCTGGTGGAG
CCTTCAGGAGGGAGAATCATTATTGATGGAATCGACATTTCATTGTTGGG
GCTTCATGACCTAAGGTCTCGCTTTGGGATCATTCCTCAAGAACCTGTCC
TTTTTGAAGGAACTGTGAGAAGCAACATTGATCCAATTGGTCAGTATTCA
GATGAAGAAATCTGGAAGAGCCTCGAGCGATGTCAACTTAAAGATGTGGT
AGCTGCAAAGCCTGATAAACTCGATTCTTTAGTGGCCGATAGTGGTGACA
ACTGGAGCGTGGGACAAAGGCAGCTTCTTTGTCTGGGAAGGGTTATGCTA
AAGCACAGCCGGCTCTTGTTTATGGATGAGGCGACGGCTTCTGTTGATTC
ACAAACTGATGCTGAAATTCAAAGGATCATTCGAGAGGGAGTCTGCTGCC
TGTACAATTATCAGCATTGCTCACAGGATACCCACAGTCATGGATTGTGA
TAAAGCTATAGTCGTTGATGCACGATGGGCGAAAGAATCTGGCGAGCCAT
CCCAGTTGCTTGAAAAGCCATCACTCTCCGCAGCATCGGTGGAAGAATTA
CCCAACCACACCATCAAACTGGACGAACGTATCCCTTGGACTCGATCGCG
GGTCGAACCGACGTTCCGGTGAAGGAAGCCCGTTATATATACAAGTTAGT
GTTCTGTCGCTGGCACAATCCCTT
back to top