EY736153

Overview
NameEY736153
Unique NameEY736153
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736153 vs. ExPASy Swiss-Prot
Match: ZDS_ARATH (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=ZDS1 PE=2 SV=3)

HSP 1 Score: 326.635 bits (836), Expect = 1.119e-88
Identity = 157/208 (75.48%), Postives = 184/208 (88.46%), Query Frame = 3
Query:   36 VVKALVDPDGALKDIRDLDSISFSDWFLSKGGTQTSIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAGCDVPGIKKWLPSSWREMKFFNHMDALMGVAVVTVQGR*HGGVSEVPHLQRARRVMRTLGVRN 659
            VVKALVDPDGA++DIR+LDSISFSDWFLSKGGT+ SIQRMWDPVAYALGFIDCDN+SARCMLTIF+LFATKTEASLLRMLKGSPDVYLSGPI++YITD+GGR HLRWGCREILYDK+A+ ETYV GLA+SKAT+KK+V+AD YVA CDVPGIK+ LP  WRE +FFN +  L GV VVTVQ R +G V+E+  ++ AR++ R +G+ N
Sbjct:  191 VVKALVDPDGAMRDIRNLDSISFSDWFLSKGGTRASIQRMWDPVAYALGFIDCDNMSARCMLTIFSLFATKTEASLLRMLKGSPDVYLSGPIKQYITDRGGRIHLRWGCREILYDKSADGETYVTGLAISKATNKKIVKADVYVAACDVPGIKRLLPKEWRESRFFNDIYELEGVPVVTVQLRYNGWVTELQDIELARQLKRAVGLDN 398          
BLAST of EY736153 vs. ExPASy Swiss-Prot
Match: ZDS_TARER (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Tagetes erecta PE=2 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 3.599e-87
Identity = 153/208 (73.56%), Postives = 185/208 (88.94%), Query Frame = 3
Query:   36 VVKALVDPDGALKDIRDLDSISFSDWFLSKGGTQTSIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAGCDVPGIKKWLPSSWREMKFFNHMDALMGVAVVTVQGR*HGGVSEVPHLQRARRVMRTLGVRN 659
            VV+ALVDPDGA+  IR+LD+ISFS+WF+SKGGT+TSIQRMWDPVAYALGFIDCDNISARCMLTIF+LFATKTEASLLRMLKGSPDVYLSGPIR YI +KGGRFHLRWGCREILY+K+AN ETYV GLAMSKAT K++V+AD Y+A CDVPGIK+ LPS+WRE +FF+++  L+GV VVTVQ R +G V+E+  ++R+R++ +  G+ N
Sbjct:  217 VVRALVDPDGAMTQIRNLDNISFSEWFMSKGGTRTSIQRMWDPVAYALGFIDCDNISARCMLTIFSLFATKTEASLLRMLKGSPDVYLSGPIRDYIIEKGGRFHLRWGCREILYEKSANGETYVTGLAMSKATQKQIVKADVYIAACDVPGIKRLLPSNWREWEFFDNIYKLVGVPVVTVQLRYNGWVTELQDVERSRQLRQAAGLDN 424          
BLAST of EY736153 vs. ExPASy Swiss-Prot
Match: ZDS_NARPS (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=ZDS1 PE=2 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 3.599e-87
Identity = 152/208 (73.08%), Postives = 185/208 (88.94%), Query Frame = 3
Query:   36 VVKALVDPDGALKDIRDLDSISFSDWFLSKGGTQTSIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAGCDVPGIKKWLPSSWREMKFFNHMDALMGVAVVTVQGR*HGGVSEVPHLQRARRVMRTLGVRN 659
            VV+AL+DP+GA++DIR+LD+ISFSDWFLSKGGT+ SIQRMWDPVAYALGFIDCDNISARCMLTIF+LFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYD+ +N +TY+ G+AMSKAT+KK+V+AD YVA CDVPGIK+ +PS WRE   F+++  L+GV VVTVQ R +G V+E+  L+++R++   +G+ N
Sbjct:  199 VVRALIDPNGAMQDIRNLDNISFSDWFLSKGGTRMSIQRMWDPVAYALGFIDCDNISARCMLTIFSLFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDELSNGDTYITGIAMSKATNKKLVKADVYVAACDVPGIKRLIPSEWREWDLFDNIYKLVGVPVVTVQLRYNGWVTEMQDLEKSRQLRAAVGLDN 406          
BLAST of EY736153 vs. ExPASy Swiss-Prot
Match: ZDS_SOLLC (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Solanum lycopersicum GN=ZDS PE=2 SV=1)

HSP 1 Score: 320.857 bits (821), Expect = 6.138e-87
Identity = 152/208 (73.08%), Postives = 183/208 (87.98%), Query Frame = 3
Query:   36 VVKALVDPDGALKDIRDLDSISFSDWFLSKGGTQTSIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAGCDVPGIKKWLPSSWREMKFFNHMDALMGVAVVTVQGR*HGGVSEVPHLQRARRVMRTLGVRN 659
            VV+ALVDPDGAL+ IRDLD++SFS+WFLSKGGT+ SIQRMWDPVAYALGFIDCDN+SARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPI+KYI DKGGRFHLRWGCRE+LY+ +++   YV GLAMSKAT KK+V+ADAYVA CDVPGIK+ +P  WRE++FF+++  L+GV VVTVQ R +G V+E+  L+R+R++ R  G+ N
Sbjct:  214 VVRALVDPDGALQQIRDLDNVSFSEWFLSKGGTRASIQRMWDPVAYALGFIDCDNMSARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIKKYIMDKGGRFHLRWGCREVLYETSSDGSMYVSGLAMSKATQKKIVKADAYVAACDVPGIKRLVPQKWRELEFFDNIYKLVGVPVVTVQLRYNGWVTELQDLERSRQLKRAAGLDN 421          
BLAST of EY736153 vs. ExPASy Swiss-Prot
Match: ZDS_CAPAN (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum GN=ZDS PE=1 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 2.333e-86
Identity = 153/208 (73.56%), Postives = 180/208 (86.54%), Query Frame = 3
Query:   36 VVKALVDPDGALKDIRDLDSISFSDWFLSKGGTQTSIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAGCDVPGIKKWLPSSWREMKFFNHMDALMGVAVVTVQGR*HGGVSEVPHLQRARRVMRTLGVRN 659
            VV+ALVDPDGAL+ IRDLDS+SFSDWF+SKGGT+ SIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPI+KYI DKGGRFHLRWGCRE+LY+ +++   YV GLAMSKAT KK+V+ADAYVA C VPGIK+ +P  WRE++FF ++  L+GV VVTVQ R +G V+E+  L+R+R+  R  G+ N
Sbjct:  214 VVRALVDPDGALQQIRDLDSVSFSDWFMSKGGTRASIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIKKYIIDKGGRFHLRWGCREVLYETSSDGSMYVSGLAMSKATQKKIVKADAYVAACVVPGIKRLVPQKWRELEFFGNIYKLIGVPVVTVQLRYNGWVTELQDLERSRQSKRATGLDN 421          
BLAST of EY736153 vs. ExPASy Swiss-Prot
Match: ZDS_MAIZE (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Zea mays GN=ZDS1 PE=2 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 2.579e-85
Identity = 148/208 (71.15%), Postives = 181/208 (87.02%), Query Frame = 3
Query:   36 VVKALVDPDGALKDIRDLDSISFSDWFLSKGGTQTSIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAGCDVPGIKKWLPSSWREMKFFNHMDALMGVAVVTVQGR*HGGVSEVPHLQRARRVMRTLGVRN 659
            VV+ALVDPDGAL+ +RDLD ISFSDWF+SKGGT+ SI RMWDPV YALGFIDCDNISARCMLTIF LFATKTEASLLRMLKGSPDVYLSGPI+KYITD+GGRFHLRWGCRE+LY+K+ + ETYVKGL ++KAT +++++ADAYVA CDVPGIK+ LPS WRE + F+++  L GV VVTVQ R +G V+E+  L+++R++ R +G+ N
Sbjct:  199 VVRALVDPDGALQQVRDLDDISFSDWFMSKGGTRESITRMWDPVRYALGFIDCDNISARCMLTIFTLFATKTEASLLRMLKGSPDVYLSGPIKKYITDRGGRFHLRWGCREVLYEKSPDGETYVKGLLLTKATSREIIKADAYVAACDVPGIKRLLPSEWREWEMFDNIYKLDGVPVVTVQLRYNGWVTELQDLEKSRQLQRAVGLDN 406          
BLAST of EY736153 vs. ExPASy Swiss-Prot
Match: ZDS_SYNY3 (Zeta-carotene desaturase OS=Synechocystis sp. (strain PCC 6803) GN=crtQ PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.057e-54
Identity = 111/209 (53.11%), Postives = 147/209 (70.33%), Query Frame = 3
Query:   36 VVKALVDPDGALKDIRDLDSISFSDWFLSKGGTQTSIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAGCDVPGIKKWLPSSWR-EMKFFNHMDALMGVAVVTVQGR*HGGVSEVPHLQRARRVMRTLGVRN 659
            +V+ LVD DGA+K IRDLD ISF++WFLSKGG + S+++MWDP+AYALGFID +NISARCMLTIF LFA +TEAS+LRML+GSP  YL  PI++Y+  +G +F+ R   +EI   K  + ET V GL ++   + K V ADAYVA CDVPGIK  LP +WR +  FFN +  L  V V TVQ R  G V+E+    + +++ +  G+ N
Sbjct:  135 IVRGLVDFDGAMKTIRDLDRISFAEWFLSKGGNEGSLKKMWDPIAYALGFIDTENISARCMLTIFQLFAARTEASVLRMLEGSPQEYLHKPIQEYLEQRGTKFYTRHKVKEI-KTKVTDGETRVTGLIINDGVETKTVTADAYVAACDVPGIKNLLPENWRTQWDFFNKIYYLDTVPVATVQLRFDGWVTEMNDPAKRKQLEQAFGLDN 342          
BLAST of EY736153 vs. ExPASy Swiss-Prot
Match: ZDS_ANASP (Zeta-carotene desaturase OS=Anabaena sp. (strain PCC 7120) GN=crtQ PE=3 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 6.411e-52
Identity = 102/208 (49.04%), Postives = 144/208 (69.23%), Query Frame = 3
Query:   36 VVKALVDPDGALKDIRDLDSISFSDWFLSKGGTQTSIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAGCDVPGIKKWLPSSWREMKFFNHMDALMGVAVVTVQGR*HGGVSEVPHLQRARRVMRTLGVRN 659
            +V+ LVD +GA+K IR+LD ISF+DWF S GG+  SI+RMW+P+AYALGFIDC+NISARCMLTIF  FA ++EAS+LRML+GSPD YL  PI +Y+  +G + + R   REI Y + A  +T V G+ ++K  + + + ADAYV  CD+PGI++ LP  WR+   F+++  L  V V TVQ R  G V+E+    + +++    G+ N
Sbjct:  135 IVRGLVDFEGAMKTIRNLDKISFADWFRSHGGSNGSIKRMWNPIAYALGFIDCENISARCMLTIFQFFAVRSEASVLRMLEGSPDEYLHQPILRYLEARGTKVYTRRQVREIKYAE-AEGQTRVTGIVVAKGDEVEEITADAYVCACDIPGIQRVLPQEWRKWSEFDNIYKLDAVPVATVQMRFDGWVTELQDENKRKQLKEAAGLDN 341          
BLAST of EY736153 vs. ExPASy Swiss-Prot
Match: CRTI_SYNE7 (Phytoene dehydrogenase OS=Synechococcus elongatus (strain PCC 7942) GN=pds PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.697e-17
Identity = 49/184 (26.63%), Postives = 97/184 (52.72%), Query Frame = 3
Query:   78 IRDLDSISFSDWFLSKGGTQTSIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAGCDVPGIKKWLPSSWREMKFFNHMDALMGVAVVTVQGR*HGGVSEVPHLQRAR 629
            + ++D  S+++W   +   +     ++  +A AL FID D ISA  +LT    F  + + S++  L G+P   L  PI +++  +GG   L    +E + +  ++ + +   +A  K  ++++++ADAYV+   V  +K  LP +W+ M +F  +D L GV V+ +       ++++ HL  +R
Sbjct:  143 VEEMDQYSWTEWLRKQNIPERVNDEVFIAMAKALNFIDPDEISATVVLTALNRFLQEKKGSMMAFLDGAPPERLCQPIVEHVQARGGDVLLNAPLKEFVLNDDSSVQAF--RIAGIKGQEEQLIEADAYVSALPVDPLKLLLPDAWKAMPYFQQLDGLQGVPVINIHLWFDRKLTDIDHLLFSR 324          
BLAST of EY736153 vs. ExPASy Swiss-Prot
Match: CRTI_SYNY3 (Phytoene dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=pds PE=3 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.948e-16
Identity = 52/185 (28.11%), Postives = 93/185 (50.27%), Query Frame = 3
Query:   78 IRDLDSISFSDWFLSKGGTQTSIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETY-VKGLAMSKATDKKVVQADAYVAGCDVPGIKKWLPSSWREMKFFNHMDALMGVAVVTVQGR*HGGVSEVPHLQRAR 629
            + ++D  ++S+W   +       + ++  ++ AL FID D ISA  +LT    F  +   S +  L G+P   L  P+  YIT++GG  H+    +EIL ++  + + Y ++GL        +V+ AD YV+   V  +K  +P+ WRE   F  +  L GV V+ +       ++++ HL  +R
Sbjct:  143 VEEMDKYTWSEWMAKQNIPPRIEKEVFIAMSKALNFIDPDEISATILLTALNRFLQEKNGSKMAFLDGAPPERLCQPLVDYITERGGEVHINKPLKEILLNEDGSVKGYLIRGL---DGAPDEVITADLYVSAMPVDPLKTMVPAPWREYPEFKQIQGLEGVPVINLHLWFDRKLTDIDHLLFSR 324          
The following BLAST results are available for this feature:
BLAST of EY736153 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
ZDS_ARATH1.119e-8875.48Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_TARER3.599e-8773.56Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_NARPS3.599e-8773.08Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_SOLLC6.138e-8773.08Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_CAPAN2.333e-8673.56Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_MAIZE2.579e-8571.15Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_SYNY31.057e-5453.11Zeta-carotene desaturase OS=Synechocystis sp. (str... [more]
ZDS_ANASP6.411e-5249.04Zeta-carotene desaturase OS=Anabaena sp. (strain P... [more]
CRTI_SYNE76.697e-1726.63Phytoene dehydrogenase OS=Synechococcus elongatus ... [more]
CRTI_SYNY31.948e-1628.11Phytoene dehydrogenase OS=Synechocystis sp. (strai... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-012-E11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736153 ID=EY736153; Name=EY736153; organism=Citrus sinensis; type=EST; length=880bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTTGTAAAGGCACTT
GTTGATCCTGATGGAGCCTTGAAGGACATACGAGATTTGGATAGTATAAG
CTTCTCTGATTGGTTTTTGTCCAAGGGTGGTACACAGACGAGTATTCAAA
GAATGTGGGATCCTGTTGCCTATGCCCTTGGGTTTATTGATTGTGATAAC
ATCAGTGCTCGTTGTATGCTTACTATATTTGCACTGTTTGCGACTAAGAC
TGAGGCTTCCCTATTGCGGATGCTCAAGGGTTCTCCAGATGTTTATTTGA
GTGGGCCCATAAGAAAATATATCACAGATAAAGGGGGCAGGTTCCATCTT
AGGTGGGGATGCAGAGAGATACTTTATGATAAAGCTGCTAATGCGGAAAC
ATATGTCAAAGGACTTGCCATGTCTAAGGCCACTGACAAGAAGGTTGTGC
AAGCTGATGCATATGTTGCAGGATGTGATGTCCCTGGAATTAAAAAATGG
CTTCCCTCATCATGGAGGGAAATGAAATTTTTCAACCATATGGATGCGCT
AATGGGAGTCGCTGTTGTCACAGTGCAGGGGAGATAGCATGGTGGGGTCT
CTGAGGTGCCACACCTACAACGGGCTAGGCGAGTCATGCGAACTCTGGGT
GTCAGAAACCCTCACGCACGACCCCGAGGCGGAGGTTGCGTGGGTCGGGG
GATCGGGCGACGACTTTGGGGGAAAGATGGGTAGGGAGGGGGGGACGCGG
AGAAAAGCGGACGAGGAGAGGGTCCCTGGAGGGGGGGCGAGTGGGGTCGC
CCGAGTTGGCCCACTCACAACCGACCGCGAGAGGCGGGGGCGCGGCCGGG
CGGGCCCCCCCGGCCGCGCGCGCAAGCGGC
back to top