EY736152

Overview
NameEY736152
Unique NameEY736152
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736152 vs. ExPASy Swiss-Prot
Match: ODBA_DICDI (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Dictyostelium discoideum GN=bkdA PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.642e-31
Identity = 66/124 (53.23%), Postives = 83/124 (66.94%), Query Frame = 1
Query:  289 VPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTSAQYATQMSANQADDGKGRQMAMDDGSKK 660
            +PC+ ++D  G + K       SKE  +KMY+ M+TL VMDS+LY+ QRQGR SFY+T+ GEEAI+IGSAAAL   D I  QYRE GV +WRG+T      Q   N+ D GKGRQM M  GS+K
Sbjct:   64 IPCYTIMDQEGVVSKPDQDPNFSKEEVIKMYTTMLTLNVMDSILYDVQRQGRISFYMTSFGEEAIHIGSAAALEMSDTIFAQYRETGVFMWRGFTINDIINQCCTNEHDLGKGRQMPMHFGSRK 187          
BLAST of EY736152 vs. ExPASy Swiss-Prot
Match: ODBA_RAT (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial (Fragment) OS=Rattus norvegicus GN=Bckdha PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.699e-28
Identity = 61/146 (41.78%), Postives = 87/146 (59.59%), Query Frame = 1
Query:  223 FPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTSAQYATQMSANQADDGKGRQMAMDDGSKK 660
            FPG    +  ++ FI  +    +P +RV+D  G++I  S+   + +E  +K+Y  M  L  MD +LYE+QRQGR SFY+T  GEE  ++GSAAAL   D +  QYRE GVL++R Y    +  Q   N +D GKGRQM +  G K+
Sbjct:   50 FPGASAEFVDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPQEEVLKLYRSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALERTDLVFGQYREAGVLMYRDYPLELFMAQCYGNVSDPGKGRQMPVHYGCKE 195          
BLAST of EY736152 vs. ExPASy Swiss-Prot
Match: ODBA_PANTR (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Pan troglodytes GN=BCKDHA PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.219e-28
Identity = 62/146 (42.47%), Postives = 87/146 (59.59%), Query Frame = 1
Query:  223 FPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTSAQYATQMSANQADDGKGRQMAMDDGSKK 660
            FPG    +  ++ FI  +    +P +RV+D  G++I  S+   + KE  +K+Y  M  L  MD +LYE+QRQGR SFY+T  GEE  ++GSAAAL   D +  QYRE GVL++R Y    +  Q   N +D GKGRQM +  G K+
Sbjct:   54 FPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDNTDLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKE 199          
BLAST of EY736152 vs. ExPASy Swiss-Prot
Match: ODBA_MACFA (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Macaca fascicularis GN=BCKDHA PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.219e-28
Identity = 62/146 (42.47%), Postives = 87/146 (59.59%), Query Frame = 1
Query:  223 FPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTSAQYATQMSANQADDGKGRQMAMDDGSKK 660
            FPG    +  ++ FI  +    +P +RV+D  G++I  S+   + KE  +K+Y  M  L  MD +LYE+QRQGR SFY+T  GEE  ++GSAAAL   D +  QYRE GVL++R Y    +  Q   N +D GKGRQM +  G K+
Sbjct:   54 FPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDNTDLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKE 199          
BLAST of EY736152 vs. ExPASy Swiss-Prot
Match: ODBA_HUMAN (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Homo sapiens GN=BCKDHA PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 2.219e-28
Identity = 62/146 (42.47%), Postives = 87/146 (59.59%), Query Frame = 1
Query:  223 FPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTSAQYATQMSANQADDGKGRQMAMDDGSKK 660
            FPG    +  ++ FI  +    +P +RV+D  G++I  S+   + KE  +K+Y  M  L  MD +LYE+QRQGR SFY+T  GEE  ++GSAAAL   D +  QYRE GVL++R Y    +  Q   N +D GKGRQM +  G K+
Sbjct:   54 FPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDNTDLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKE 199          
BLAST of EY736152 vs. ExPASy Swiss-Prot
Match: ODBA_MOUSE (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Mus musculus GN=Bckdha PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.101e-27
Identity = 60/146 (41.10%), Postives = 86/146 (58.90%), Query Frame = 1
Query:  223 FPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTSAQYATQMSANQADDGKGRQMAMDDGSKK 660
            FPG    +  ++ FI  +    +P +RV+D  G++I  S+   + +E  +K Y  M  L  MD +LYE+QR+GR SFY+T  GEE  ++GSAAAL   D +  QYRE GVL++R Y    + +Q   N  D GKGRQM +  G K+
Sbjct:   51 FPGASAEFVDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPQEEVLKFYRSMTLLNTMDRILYESQREGRISFYMTNYGEEGTHVGSAAALERTDLVFGQYREAGVLMYRDYPLELFMSQCYGNVNDPGKGRQMPVHYGCKE 196          
BLAST of EY736152 vs. ExPASy Swiss-Prot
Match: ODBA_BOVIN (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Bos taurus GN=BCKDHA PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.878e-27
Identity = 60/146 (41.10%), Postives = 86/146 (58.90%), Query Frame = 1
Query:  223 FPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTSAQYATQMSANQADDGKGRQMAMDDGSKK 660
            FPG    +  ++ FI  +    +P +RV+D  G++I  S+   + +E  +K Y  M  L  MD +LYE+QRQGR SFY+T  GEE  ++GSAAAL   D +  QYRE GVL++R Y    +  Q   N +D GKGRQM +  G ++
Sbjct:   64 FPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPQEKVLKFYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDDTDLVFGQYREAGVLMYRDYPLELFMAQCYGNVSDLGKGRQMPVHYGCRE 209          
BLAST of EY736152 vs. ExPASy Swiss-Prot
Match: ODBA_PSEAE (2-oxoisovalerate dehydrogenase subunit alpha OS=Pseudomonas aeruginosa GN=bkdA1 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.051e-14
Identity = 46/130 (35.38%), Postives = 70/130 (53.85%), Query Frame = 1
Query:  271 ESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTSAQYATQMSANQADDGKGRQMAMDDGSKK 660
            E+S+      RVLDD+G  + G    Q+S E  ++    M+  ++ D+ +  AQRQ + SFY+  +GEEAI      AL   D   P YR+ G+L+ R Y       Q+ +N+AD  KGRQ+ +   SK+
Sbjct:   46 ETSDLAYSLVRVLDDDGHAV-GPWNPQLSNEQLLRGMRAMLKTRLFDARMLTAQRQKKLSFYMQCLGEEAIATAHTLALRDGDMCFPTYRQQGILITREYPLVDMICQLLSNEADPLKGRQLPIMYSSKE 174          
BLAST of EY736152 vs. ExPASy Swiss-Prot
Match: ODBA_PSEPU (2-oxoisovalerate dehydrogenase subunit alpha OS=Pseudomonas putida GN=bkdA1 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 4.966e-12
Identity = 38/112 (33.93%), Postives = 64/112 (57.14%), Query Frame = 1
Query:  301 RVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTSAQYATQMSANQADDGKGRQM 636
            RVLD+ G+  +G   + +  ++  +    M+  ++ DS +  AQRQ + SFY+ ++GEEAI  G A AL+  D   P YR+  +L+ R  +  +   Q+ +N+ D  KGRQ+
Sbjct:   56 RVLDEQGDA-QGPWAEDIDPQILRQGMRAMLKTRIFDSRMVVAQRQKKMSFYMQSLGEEAIGSGQALALNRTDMCFPTYRQQSILMARDVSLVEMICQLLSNERDPLKGRQL 166          
BLAST of EY736152 vs. ExPASy Swiss-Prot
Match: ODPA_BACST (Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus stearothermophilus GN=pdhA PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.106e-11
Identity = 34/99 (34.34%), Postives = 54/99 (54.55%), Query Frame = 1
Query:  271 ESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRG 567
            E   ++ P F++L++ GE++      ++S E   ++   MV  +++D       RQGR  FY  T G+EA  I S  AL  +DFILP YR+   ++W G
Sbjct:   15 EKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHG 113          
The following BLAST results are available for this feature:
BLAST of EY736152 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
ODBA_DICDI1.642e-3153.232-oxoisovalerate dehydrogenase subunit alpha, mito... [more]
ODBA_RAT1.699e-2841.782-oxoisovalerate dehydrogenase subunit alpha, mito... [more]
ODBA_PANTR2.219e-2842.472-oxoisovalerate dehydrogenase subunit alpha, mito... [more]
ODBA_MACFA2.219e-2842.472-oxoisovalerate dehydrogenase subunit alpha, mito... [more]
ODBA_HUMAN2.219e-2842.472-oxoisovalerate dehydrogenase subunit alpha, mito... [more]
ODBA_MOUSE1.101e-2741.102-oxoisovalerate dehydrogenase subunit alpha, mito... [more]
ODBA_BOVIN1.878e-2741.102-oxoisovalerate dehydrogenase subunit alpha, mito... [more]
ODBA_PSEAE9.051e-1435.382-oxoisovalerate dehydrogenase subunit alpha OS=Ps... [more]
ODBA_PSEPU4.966e-1233.932-oxoisovalerate dehydrogenase subunit alpha OS=Ps... [more]
ODPA_BACST1.106e-1134.34Pyruvate dehydrogenase E1 component subunit alpha ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-012-E10-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736152 ID=EY736152; Name=EY736152; organism=Citrus sinensis; type=EST; length=878bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGGATATTAAGTGGCC
AGAGTTGTCATCCCCATCAACAATAATATTCCCACTTCAGCAATATAATT
CATCATCACTTCCAAGCAAAACCCTTTTCTCGCCGGGGCGTTCCGAGTCC
ACCGTTGCTTCCAATCAGCTGGATTCTTTGTCTTCCAGTGACAGCGATGA
TGATCATCATCAGGTCTTGGATTTTCCCGGAGGCAAAGTTGGATATACTT
CTGAAATGAGGTTCATTCCTGAGTCTTCAGAGAAAAGAGTGCCTTGTTTT
CGAGTTCTTGATGACAATGGAGAGCTAATCAAGGGCAGTGATTTTCAACA
GGTGAGCAAGGAAGTTGCTGTAAAGATGTATAGCCATATGGTCACACTGC
AGGTAATGGACTCTGTATTGTACGAAGCACAAAGGCAAGGGAGATTTTCT
TTCTATCTTACAACAATTGGTGAAGAAGCAATCAACATAGGATCAGCAGC
TGCACTCAGCGCCGATGATTTTATCTTGCCTCAGTACCGAGAGCCTGGAG
TACTCTTATGGCGTGGCTACACATCTGCACAATATGCAACCCAGATGTCC
GCAAACCAAGCTGATGATGGGAAAGGCAGACAGATGGCAATGGATGATGG
GTCGAAAAAGGGTGACTCAATGCACGTATTCGTGACCGATAGCCAGACAA
GCTGCCTCAAGGATGTTGGTGGGGGGTAAGCTCGTCTAAATTGGAGAAGA
AGGGTGGAGGAGAGAAGTGCCGATAAAGGGAGAAGGGGGGGCGGCGCGCC
GCGTGATCGGGCTGTGCCAGTGGAGGATTCGGAAGGAGTCATGAAGCCAG
ACGAAGCGAACCAATACGGGGGAAGAAG
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