EY736151
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY736151 vs. ExPASy Swiss-Prot
Match: FAD3C_SOYBN (Omega-3 fatty acid desaturase, chloroplastic OS=Glycine max GN=FAD7 PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 4.728e-47 Identity = 103/208 (49.52%), Postives = 119/208 (57.21%), Query Frame = 3 Query: 57 MASWVLSECGLKPLPHIFPRPRTGI---NPSKARFLHSKKSLTDLKLPLVKCSGDFSRDRNWGLKVSAPLRVAPLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSLSNDHKWNTCGGASACILSVLVP 671 MA+W +CGLKPL + PRPRTG + S+ FL + K + K ++C+ R+RNWGLKVSAPLRVA +E E FDPGAPPPF LADIRAAIPKHCWVKDPW+SMSY PLYWAAQGTMFWALFVLGHDCGHGS SN+ K N+ G S+LVP Sbjct: 1 MATWYHQKCGLKPLAPVIPRPRTGAALSSTSRVEFLDTNKVVAGPKFQPLRCN---LRERNWGLKVSAPLRVASIEEEQKSVDLTNGTNGVEHEKLPE-----FDPGAPPPFNLADIRAAIPKHCWVKDPWRSMSYVVRDVIAVFGLAAAAAYLNNWLVWPLYWAAQGTMFWALFVLGHDCGHGSFSNNSKLNSVVG-HLLHSSILVP 199
BLAST of EY736151 vs. ExPASy Swiss-Prot
Match: FAD3C_SESIN (Omega-3 fatty acid desaturase, chloroplastic OS=Sesamum indicum GN=FAD7 PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.376e-46 Identity = 105/211 (49.76%), Postives = 119/211 (56.40%), Query Frame = 3 Query: 57 MASWVLSECGLKPLPHIFPRPRTG-----INPSKARFLHSKKSLTDLKLPLVKC-SGDFSRDRNWGLKVSAPLRVAPLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSLSNDHKWNTCGGASACILSVLVP 671 MASWVLSECGL+PLP ++P+PRTG NP+K RF S TDL C S R++NW L+VSAPLRV +E E+ FDPGAPPPFKL+DIR AIPKHCWVKDPW+SM Y PLYW AQ TMFWALFVLGHDCGHGS SND K N+ G S+LVP Sbjct: 1 MASWVLSECGLRPLPRVYPKPRTGHPLLNSNPTKLRF-----SRTDLGNGSSFCLSSGILREKNWALRVSAPLRVLQVEEEEENKEGERVINGGEE----------FDPGAPPPFKLSDIREAIPKHCWVKDPWRSMGYVVRDVAVVFGLAAVAAYFNNWVVWPLYWFAQSTMFWALFVLGHDCGHGSFSNDPKLNSVVG-HILHSSILVP 195
BLAST of EY736151 vs. ExPASy Swiss-Prot
Match: FAD3C_RICCO (Omega-3 fatty acid desaturase, chloroplastic OS=Ricinus communis GN=FAD7A-1 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.282e-40 Identity = 96/209 (45.93%), Postives = 109/209 (52.15%), Query Frame = 3 Query: 60 ASWVLSECGLKPLPHIFPRPRTGI-----NPSKARFLHSKKSLTDLKLPLVKCSGDFSRDRNWGLKVSAPLRVAPLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSLSNDHKWNTCGGASACILSVLVP 671 A WVLSECGL+PLP I+ RPR G N K R L KS +L S S+ NW L V+ P+ V+ + GED FD GAPPPF LADIRAAIPKHCWVK+PW+SMSY PLYW QGTMFWALFVLGHDCGHGS SN+ K N+ G S+LVP Sbjct: 3 AGWVLSECGLRPLPRIYSRPRIGFTSKTTNLLKLRELPDSKSY-NLCSSFKVSSWSNSKQSNWALNVAVPVNVSTVSGEDDREREEFNGIVNVDEGKGEF----FDAGAPPPFTLADIRAAIPKHCWVKNPWRSMSYVLRDVVVVFGLAAVAAYFNNWVAWPLYWFCQGTMFWALFVLGHDCGHGSFSNNPKLNSVVG-HLLHSSILVP 205
BLAST of EY736151 vs. ExPASy Swiss-Prot
Match: FAD3C_ARATH (Omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD7 PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.739e-39 Identity = 100/215 (46.51%), Postives = 113/215 (52.56%), Query Frame = 3 Query: 57 MASWVLSECGLKPLPHIFPRPRTGI--NPSKARFLHSKKSLTDLKLPLVKCSGDFSRD---RNWGLKVSAPLRV-----APLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSLSNDHKWNTCGGASACILSVLVP 671 MA+ VLSECG++PLP I+ PR+ N +K R S S PL G SRD RNW L VS PL +PLE ++ FDPGAPPPF LADIRAAIPKHCWVK+PWKS+SY PLYW AQGTMFWALFVLGHDCGHGS SND K N+ G S+LVP Sbjct: 1 MANLVLSECGIRPLPRIYTTPRSNFLSNNNKFRPSLSSSSYKTSSSPL--SFGLNSRDGFTRNWALNVSTPLTTPIFEESPLEEDNKQR---------------------FDPGAPPPFNLADIRAAIPKHCWVKNPWKSLSYVVRDVAIVFALAAGAAYLNNWIVWPLYWLAQGTMFWALFVLGHDCGHGSFSNDPKLNSVVG-HLLHSSILVP 191
BLAST of EY736151 vs. ExPASy Swiss-Prot
Match: FAD3D_ARATH (Temperature-sensitive omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD8 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.843e-38 Identity = 89/205 (43.41%), Postives = 101/205 (49.27%), Query Frame = 3 Query: 57 MASWVLSECGLKPLPHIFPRPRTGINPSKARFLHSKKSLTDLKLPLVKCSGDFSRDRNWGLKVSAPLRVAPLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSLSNDHKWNTCGGASACILSVLVP 671 MAS VLSECG +PLP +P+ T + L L G +S+ RNW L V+ PL E+ FDPGAPPPF LADIRAAIPKHCWVK+PW SMSY PLYW AQGTMFWALFVLGHDCGHGS SND + N+ G S+LVP Sbjct: 1 MASSVLSECGFRPLPRFYPKHTTSFASNPKPTFKFNPPLKPPSSLLNSRYGFYSKTRNWALNVATPLTTLQSPSEEDTER--------------------FDPGAPPPFNLADIRAAIPKHCWVKNPWMSMSYVVRDVAIVFGLAAVAAYFNNWLLWPLYWFAQGTMFWALFVLGHDCGHGSFSNDPRLNSVAG-HLLHSSILVP 184
BLAST of EY736151 vs. ExPASy Swiss-Prot
Match: FAD3C_BRANA (Omega-3 fatty acid desaturase, chloroplastic (Fragment) OS=Brassica napus GN=FAD7 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.750e-31 Identity = 75/154 (48.70%), Postives = 81/154 (52.60%), Query Frame = 3 Query: 225 RNWGLKVSAPLRV-----APLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSLSNDHKWNTCGGASACILSVLVP 671 RNW L V+ PL V P+E E FDPGAPPPF LADIRAAIPKHCWVK+PWKSMSY PLYW AQGTMFWALFVLGHDCGHGS SND + N+ G S+LVP Sbjct: 17 RNWALNVTTPLTVDSSSSPPIEEEPKTQR--------------------FDPGAPPPFNLADIRAAIPKHCWVKNPWKSMSYVVRELAIVFALAAGAAYLNNWLVWPLYWIAQGTMFWALFVLGHDCGHGSFSNDPRLNSVVG-HLLHSSILVP 149
BLAST of EY736151 vs. ExPASy Swiss-Prot
Match: FAD3E_PHAAU (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Phaseolus aureus GN=ARG1 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.065e-26 Identity = 65/134 (48.51%), Postives = 73/134 (54.48%), Query Frame = 3 Query: 357 FDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSLSNDHKWNTCGGASACILSVLVPLLWPGHXXXXXXXXXXXXNVEK*MNSWAP 758 FDPGAPPPFK+ADIRAAIPKHCW K +S+SY PLYW AQGTMFWALFVLGHDCGHGS SN K N+ G IL L+ + + G +VEK SW P Sbjct: 22 FDPGAPPPFKIADIRAAIPKHCWEKSTLRSLSYVLRDVLVVTALAASAISFNSWFFWPLYWPAQGTMFWALFVLGHDCGHGSFSNSSKLNSFVGH---ILHSLILVPYNGWRISHRTHHQNHGHVEK-DESWVP 151
BLAST of EY736151 vs. ExPASy Swiss-Prot
Match: FAD3E_TOBAC (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Nicotiana tabacum GN=FAD3 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.297e-24 Identity = 51/94 (54.26%), Postives = 57/94 (60.64%), Query Frame = 3 Query: 357 FDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSLSNDHKWNTCGG 638 FDP APPPF+LA+IR IPKHCWVKDP +S+SY PLYWA QGTMFWA+FVLGHDCGHGS S+ N G Sbjct: 22 FDPSAPPPFRLAEIRNVIPKHCWVKDPLRSLSYVVRDVIFVATLIGIAIHLDSWLFYPLYWAIQGTMFWAIFVLGHDCGHGSFSDSQLLNNVVG 115
BLAST of EY736151 vs. ExPASy Swiss-Prot
Match: FAD3E_ARATH (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD3 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.624e-24 Identity = 50/85 (58.82%), Postives = 55/85 (64.71%), Query Frame = 3 Query: 357 FDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSLSN 611 FDP A PPFK+ DIRAAIPKHCWVK P +SMSY PLYWAAQGT+FWA+FVLGHDCGHGS S+ Sbjct: 26 FDPSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVVRDIIAVAALAIAAVYVDSWFLWPLYWAAQGTLFWAIFVLGHDCGHGSFSD 110
BLAST of EY736151 vs. ExPASy Swiss-Prot
Match: FAD3E_BRANA (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Brassica napus GN=FAD3 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.636e-23 Identity = 49/85 (57.65%), Postives = 54/85 (63.53%), Query Frame = 3 Query: 357 FDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSLSN 611 FDP A PPFK+ DIRAAIPKHCWVK P +SMSY PLYW AQGT+FWA+FVLGHDCGHGS S+ Sbjct: 23 FDPSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVTRDIFAVAALAMAAVYFDSWFLWPLYWVAQGTLFWAIFVLGHDCGHGSFSD 107 The following BLAST results are available for this feature:
BLAST of EY736151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >EY736151 ID=EY736151; Name=EY736151; organism=Citrus sinensis; type=EST; length=876bpback to top |