EY736064

Overview
NameEY736064
Unique NameEY736064
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6171 contig Csv1_Contig6171:293..1147. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY736064 vs. ExPASy Swiss-Prot
Match: CHLG_AVESA (Chlorophyll synthase, chloroplastic OS=Avena sativa GN=CHLG PE=1 SV=1)

HSP 1 Score: 460.299 bits (1183), Expect = 6.225e-129
Identity = 219/260 (84.23%), Postives = 234/260 (90.00%), Query Frame = 2
Query:    5 RPASTDKAPAASGSSFNQLLGIKGAAQETNKWKIRLQLTKPVTWPPLIWGIVCGAAASGNFHWNLEDVAKSIVCMIMSGPCLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVXXXXXXXXXXXXDVWAGHDFPTIFWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDXSMGLQSLPVAFGPETAKWICVGANDITQISVA 784
            +P   DKAPAA GSSFNQLLGIKGA QETN WKIRLQLTKPVTWPPL+WG++CGAAASGNFHW +EDV KSIVCM+MSGPCLTGYTQTINDWYDR+IDAINEPYRPIPSGAISENEVITQIWV            D+WAGHDFP IF+LA+GGSLLSYIYSAPPLKLKQNGWIGNFALGASYI LPWWAGQALFGTLTPDI+VLT LYSIAGLGIAIVNDFKS+EGD ++GLQSLPVAFG ETAKWICVGA DITQ+SVA
Sbjct:   58 KPTIPDKAPAA-GSSFNQLLGIKGAKQETNIWKIRLQLTKPVTWPPLVWGVLCGAAASGNFHWTVEDVTKSIVCMLMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQIWVLLLGGLGLGALLDIWAGHDFPIIFYLALGGSLLSYIYSAPPLKLKQNGWIGNFALGASYIGLPWWAGQALFGTLTPDIVVLTCLYSIAGLGIAIVNDFKSIEGDRTLGLQSLPVAFGMETAKWICVGAIDITQLSVA 316          
BLAST of EY736064 vs. ExPASy Swiss-Prot
Match: CHLG_ORYSJ (Chlorophyll synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=CHLG PE=2 SV=1)

HSP 1 Score: 457.218 bits (1175), Expect = 5.270e-128
Identity = 220/262 (83.97%), Postives = 234/262 (89.31%), Query Frame = 2
Query:    2 TRPASTDKAPAASGSSFNQLLGIKGAAQETNKWKIRLQLTKPVTWPPLIWGIVCGAAASGNFHWNLEDVAKSIVCMIMSGPCLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVXXXXXXXXXXXXDVWAGHDFPTIFWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDXSMGLQSLPVAFGPETAKWICVGANDITQISVAG 787
            T+  + +KAPA  GSSFNQLLGIKGA QE + WKIRLQLTKPVTWPPL+WG++CGAAASGNFHW +EDVAKSIVCMIMSGPCLTGYTQTINDWYDR+IDAINEPYRPIPSGAISENEVITQIW             DVWAGHDFP IF+LAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYI LPWWAGQALFGTLTPDI+VLT LYSIAGLGIAIVNDFKSVEGD ++GLQSLPVAFG ETAKWICVGA DITQ+SVAG
Sbjct:   55 TKANAPEKAPAG-GSSFNQLLGIKGAKQENDIWKIRLQLTKPVTWPPLVWGVLCGAAASGNFHWTVEDVAKSIVCMIMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQIWALLLAGLGLGALLDVWAGHDFPIIFYLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYIGLPWWAGQALFGTLTPDIVVLTSLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGMETAKWICVGAIDITQLSVAG 315          
BLAST of EY736064 vs. ExPASy Swiss-Prot
Match: CHLG_ARATH (Chlorophyll synthase, chloroplastic OS=Arabidopsis thaliana GN=CHLG PE=2 SV=1)

HSP 1 Score: 456.447 bits (1173), Expect = 8.989e-128
Identity = 217/256 (84.77%), Postives = 233/256 (91.02%), Query Frame = 2
Query:   20 DKAPAASGSSFNQLLGIKGAAQETNKWKIRLQLTKPVTWPPLIWGIVCGAAASGNFHWNLEDVAKSIVCMIMSGPCLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVXXXXXXXXXXXXDVWAGHDFPTIFWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDXSMGLQSLPVAFGPETAKWICVGANDITQISVAG 787
            DKAPA  GSS NQLLGIKGA+QETNKWKIRLQLTKPVTWPPL+WG+VCGAAASGNFHW  EDVAKSI+CM+MSGPCLTGYTQTINDWYDR+IDAINEPYRPIPSGAISE EVITQ+WV            DVWAGH  PT+F+LA+GGSLLSYIYSAPPLKLKQNGW+GNFALGASYISLPWWAGQALFGTLTPD++VLTLLYSIAGLGIAIVNDFKSVEGD ++GLQSLPVAFG ETAKWICVGA DITQ+SVAG
Sbjct:   72 DKAPAG-GSSINQLLGIKGASQETNKWKIRLQLTKPVTWPPLVWGVVCGAAASGNFHWTPEDVAKSILCMMMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEPEVITQVWVLLLGGLGIAGILDVWAGHTTPTVFYLALGGSLLSYIYSAPPLKLKQNGWVGNFALGASYISLPWWAGQALFGTLTPDVVVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGTETAKWICVGAIDITQLSVAG 326          
BLAST of EY736064 vs. ExPASy Swiss-Prot
Match: BCHG_CHLAA (Bacteriochlorophyll synthase 34 kDa chain OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=bchG PE=4 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 6.823e-43
Identity = 95/237 (40.08%), Postives = 136/237 (57.38%), Query Frame = 2
Query:   83 QETNKWKIR-LQLTKPVTWPPLIWGIVCGAAASGNFHWNLEDVAKSIVCMIMSGPCLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVXXXXXXXXXXXXDVWAGHDFPTIFWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDXSMGLQSLPVAFGPETAKWICVGANDITQISVAGL 790
            Q    W +R +QL KPVTW    W  +CGA ASG   WN E + + ++ M M+GP L G +Q +ND+ DRE+DAINEP+R IPSG +S    +  +++             ++ G      F++A+G  + +  YS  P++ K+NGWIGN  +  SY  L W AG A F  LT + + + LLYS+   GI  VNDFKS+ GD  MG++S+PV +G   A  + V    + QI+V GL
Sbjct:   23 QSRYAWLVRSIQLMKPVTWFAPTWAFMCGAIASGALGWN-ESIGRLLLGMFMAGPILCGLSQVVNDYADREVDAINEPHRLIPSGQVS----LRHVYILTAVLTWIGASIALFLGRQ--VAFFVALG-LVFALAYSLRPIRGKRNGWIGNALVAISYEGLAWMAGHAAFAPLTGESVTIALLYSLGAHGIMTVNDFKSIRGDTIMGIRSIPVQYGKVMAARMVVTTMGVAQIAVIGL 251          
BLAST of EY736064 vs. ExPASy Swiss-Prot
Match: BCHG_RHOCA (Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter capsulatus GN=bchG PE=4 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.401e-33
Identity = 80/230 (34.78%), Postives = 119/230 (51.74%), Query Frame = 2
Query:  110 LQLTKPVTWPPLIWGIVCGAAASGNFHWNLEDVAKSIVCMIMSGPCLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVXXXXXXXXXXXXDVWAGHDFPTIFWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPD------IIVLTLLYSIAGLGIAIVNDFKSVEGDXSMGLQSLPVAFGPETAKWICVGANDITQISV 781
            L+L KPVTW P +W  +CGA +S    W  + V   ++ ++++GP + G +Q  NDW DR +DAINEP+RPIPSG I     +                   W        F   + G   ++ YS  P++LK++GW G   +G +Y  LPW  G A+    T D      I+++  LY++   GI  +NDFK++EGD  +G++SLP  +GPE A  I      + Q  V
Sbjct:   20 LELIKPVTWFPPMWAYLCGAVSSNVPIWENKGVV--VLGIVLAGPIVCGMSQAANDWCDRHVDAINEPHRPIPSGRIPGLWGLYIAIAMSLLSLVVGWQLGSWG-------FVATLLGVAAAWAYSVEPIRLKRSGWWGPGLVGLAYEGLPWITGAAVL-LATADTSPGFPIVMMATLYALGAHGIMTINDFKAIEGDRKLGIKSLPAVYGPEVAAKIACTVMGLAQALV 239          
BLAST of EY736064 vs. ExPASy Swiss-Prot
Match: BCHG_RHOS4 (Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=bchG PE=4 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.359e-33
Identity = 80/229 (34.93%), Postives = 116/229 (50.66%), Query Frame = 2
Query:  110 LQLTKPVTWPPLIWGIVCGAAASGNFHWNLEDVAKSIVCMIMSGPCLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVXXXXXXXXXXXXDVWAGHDFPTIFWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLT--LLYSIAGLGIAIVNDFKSVEGDXSMGLQSLPVAFGPETAKWICVGANDITQISVAGL 790
            L+L +P+TW P IW  +CG  + G   W  E     ++ M+++GP + G +Q  N+W DR +DA+NEP RPIPSG I     +    +              W        F   V G L ++ YS  P++LK++GW G   +   Y  LPW+ G A+     P   ++T  LLY+    GI  +NDFK++EGD   G++SLPV  GPE A  +      + QI V  L
Sbjct:   19 LELIQPITWFPPIWAYLCGTVSVGI--WPGEKWPLVLLGMVLAGPLVCGMSQAANNWCDRHVDAVNEPDRPIPSGRIPGRWGLYIALLMTVLSLAVGWMLGPWG-------FGATVFGVLAAWAYSVEPIRLKRSGWWGPGLVALCYEGLPWFTGAAVLSAGAPSFFIVTVALLYAFGAHGIMTLNDFKALEGDRQHGVRSLPVMLGPEVAAKLACTVMAMAQILVITL 238          
BLAST of EY736064 vs. ExPASy Swiss-Prot
Match: DGGGP_METJA (Digeranylgeranylglyceryl phosphate synthase OS=Methanocaldococcus jannaschii GN=MJ0279 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.134e-12
Identity = 61/195 (31.28%), Postives = 93/195 (47.69%), Query Frame = 2
Query:  152 GIVCGAAASGNFHWNLEDVAKSI-VCMIMSGPCLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVXXXXXXXXXXXXDVWAGHDFPTIFWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDXSMGLQSLPVAFGPET 733
            G + G   S NF     D+ KS+ V  ++   C   Y   IND +D EID IN+P RP+PSG I  NE      +            +++A         +AV  +L  Y+Y+    K K+   IGNF +G    S+  + G A  G     +++L L   ++  G  IV DF+ +EGD   G+ SLP+ +G ++
Sbjct:   26 GGIIGYLISSNFEI---DILKSLLVFFVVFFVC--AYGNVINDIFDIEIDRINKPSRPLPSGKIKLNEAKKFSAILLILGLVLSLFINIYA-------LIIAVINALFLYLYAK---KYKKYKPIGNFIIGYLTGSVFLFGGVA--GKNVMPVVILFLCSLLSIWGREIVKDFEDMEGDKKEGVISLPIKYGKKS 203          
BLAST of EY736064 vs. ExPASy Swiss-Prot
Match: DGGGP_METKA (Digeranylgeranylglyceryl phosphate synthase OS=Methanopyrus kandleri GN=MK0953 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.812e-11
Identity = 62/214 (28.97%), Postives = 94/214 (43.93%), Query Frame = 2
Query:  110 LQLTKPVTWPPLIWGIVCGAAASGNFHWNLEDVAKSIVCMIMSGPCLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVXXXXXXXXXXXXDVWAGHDFPTI-----FWLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSVEGDXSMGLQSLPVAFGPETA 736
            L+L +P+       G+V G   +G       DV   +  ++ +  C  G    IND++D E+DA+N P RPIPSG +S                          G    T+       +A   S+L Y+YS    +LK    IGN  +  SY+    +   A  G      + L LL  +A L   I+ D + VEGD ++GL++LP+A+G   A
Sbjct:    5 LELARPINCAMAALGVVVGELIAGA----RLDVGAVLAPVVAAVVCAGG--NAINDYFDAEVDAVNRPDRPIPSGRVSPRSA------------RMFALGCFAVGVGMATVINRMCLAIAALNSVLLYLYS---WRLKGTPLIGNVMV--SYLVGSCFLFGAAVGQRPAPAVWLFLLAFLANLVREILKDLEDVEGDAALGLKTLPIAYGEGVA 195          
The following BLAST results are available for this feature:
BLAST of EY736064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
CHLG_AVESA6.225e-12984.23Chlorophyll synthase, chloroplastic OS=Avena sativ... [more]
CHLG_ORYSJ5.270e-12883.97Chlorophyll synthase, chloroplastic OS=Oryza sativ... [more]
CHLG_ARATH8.989e-12884.77Chlorophyll synthase, chloroplastic OS=Arabidopsis... [more]
BCHG_CHLAA6.823e-4340.08Bacteriochlorophyll synthase 34 kDa chain OS=Chlor... [more]
BCHG_RHOCA6.401e-3334.78Bacteriochlorophyll synthase 33 kDa chain OS=Rhodo... [more]
BCHG_RHOS48.359e-3334.93Bacteriochlorophyll synthase 33 kDa chain OS=Rhodo... [more]
DGGGP_METJA8.134e-1231.28Digeranylgeranylglyceryl phosphate synthase OS=Met... [more]
DGGGP_METKA1.812e-1128.97Digeranylgeranylglyceryl phosphate synthase OS=Met... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-009-E09-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736064 ID=EY736064; Name=EY736064; organism=Citrus sinensis; type=EST; length=856bp
CACGCGTCCGGCAAGCACCGATAAAGCCCCGGCTGCTAGTGGATCGAGCT
TCAATCAGCTTCTTGGCATTAAGGGAGCTGCACAAGAAACTAATAAATGG
AAGATTCGTCTTCAACTAACAAAGCCTGTTACCTGGCCTCCGTTGATTTG
GGGAATAGTTTGTGGTGCTGCTGCTTCTGGAAACTTTCACTGGAATTTGG
AGGATGTTGCTAAATCAATTGTCTGTATGATCATGTCTGGCCCGTGTCTC
ACTGGCTACACACAGACGATTAATGATTGGTATGATCGAGAGATTGATGC
AATTAATGAACCCTATCGTCCAATTCCTTCAGGTGCAATATCTGAGAATG
AGGTCATTACCCAGATCTGGGTTTTACTGCTAGCAGGCCTTGGATTAGCT
GGTTTATTAGACGTGTGGGCAGGGCATGACTTCCCAACGATATTTTGGCT
TGCTGTGGGTGGATCCTTGCTATCATACATATACTCTGCTCCACCTTTGA
AGCTGAAGCAAAATGGATGGATTGGAAATTTTGCTCTGGGAGCGAGCTAT
ATAAGTTTGCCATGGTGGGCAGGCCAAGCTTTGTTTGGGACGCTTACGCC
TGACATAATAGTTCTCACACTCTTGTACAGCATTGCTGGGTTAGGTATTG
CAATTGTAAATGACTTTAAGAGTGTTGAAGGAGATNAGAGCATGGGACTT
CAGTCACTTCCAGTAGCTTTTGGTCCTGAAACTGCTAAATGGATTTGTGT
TGGCGCCAATGACATAACTCAGATATCTGTGGCTGGTCTTTACTAAGGGC
CTGGTAACCATATTATGCCCTACCGCCACTAACCTTGATAGTGCCACCAA
TCCTCC
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