EY736059

Overview
NameEY736059
Unique NameEY736059
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3756 contig Csv1_Contig3756:271..1117. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY736059 vs. ExPASy Swiss-Prot
Match: Y5986_ARATH (Uncharacterized protein At5g39865 OS=Arabidopsis thaliana GN=At5g39865 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.303e-30
Identity = 72/166 (43.37%), Postives = 105/166 (63.25%), Query Frame = 3
Query:  276 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGK-----NVTLPQVFIRGKHVGNADVLKSMYETGELARVL---DGFPKRQPGF--VCGSCGDVKFVPCGNCSGSRKVF----DEADGVP----KRCLECNENGLNRCPDGC 719
            ++R+V+Y TSLRGIR+T+EDC  +R+I +   + +DERDVSM S +K EL+ +  GK      +TLP+VF+  K++G  + +K + E GEL +++   +      PGF   C +CGDV+FVPC  CSGS K++    +E +GV     +RC  CNENGL RC   C
Sbjct:  224 KERVVLYFTSLRGIRKTYEDCCNIRIILKSLGIRIDERDVSMHSGFKDELKKLLEGKFNNGVGITLPRVFLGNKYLGGVEEIKKLNENGELEKLIKDCEMVEDGSPGFGNECEACGDVRFVPCETCSGSCKLYHEGEEEDEGVTEYGFQRCPYCNENGLIRCHVCC 389          
BLAST of EY736059 vs. ExPASy Swiss-Prot
Match: Y3885_ARATH (Uncharacterized protein At3g28850 OS=Arabidopsis thaliana GN=At3g28850 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.150e-29
Identity = 71/178 (39.89%), Postives = 104/178 (58.43%), Query Frame = 3
Query:  276 EDRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFG-----GKNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPKRQP-----GFVCGSCGDVKFVPCGNCSGSRKVF----------DEADGVP----------KRCLECNENGLNRCPDGC 719
            ++R+++Y TSLRGIR+T+E+   VR+I +   + VDERDVSM S +K EL+ + G     G  +TLP+VF+  K++G A+ ++ + E G+L ++L G  + +      G  C +CGDV+FVPC  CSGS KV+          DE D             + C +CNENGL RCP  C
Sbjct:  250 KERVILYFTSLRGIRKTYEESCDVRVILKSLGIRVDERDVSMHSGFKDELKELLGEKFNKGVGITLPRVFLGRKYIGGAEEIRKLNEDGKLEKLLGGCERVEENQNGNGLECEACGDVRFVPCETCSGSCKVYYEYEDDDDDDDEGDDDESVKEEREYGFQTCPDCNENGLIRCPVCC 427          
BLAST of EY736059 vs. ExPASy Swiss-Prot
Match: GRCR1_HUMAN (Glutaredoxin domain-containing cysteine-rich protein 1 OS=Homo sapiens GN=GRXCR1 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.015e-23
Identity = 66/167 (39.52%), Postives = 95/167 (56.89%), Query Frame = 3
Query:  240 YNNESSI-RLPGTE---DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKEL--QCVFGGKNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPKRQPGFVCGSCGDVKFVPCGNCSGS-----RKVFDEADGVPKRCLECNENGLNRC 707
            +NN + + + P T+   DR+V+Y T LR +R TFE C  VR IF+  RV  +E++++++  Y KEL  +C    +  +LP VFI G ++G A+ + SM E+GEL  +L    + Q    C SCG   F+PC  C GS     R  F ++    K C  CNENGL RC
Sbjct:  120 FNNLTKVLQQPSTDLEFDRVVIYTTCLRVVRTTFERCELVRKIFQNHRVKFEEKNIALNGEYGKELDERCRRVSEAPSLPVVFIDGHYLGGAEKILSMNESGELQDILTKIERVQHPHECPSCGGFGFLPCSVCHGSKMSMFRNCFTDSFKALK-CTACNENGLQRC 285          
BLAST of EY736059 vs. ExPASy Swiss-Prot
Match: GRCR1_MOUSE (Glutaredoxin domain-containing cysteine-rich protein 1 OS=Mus musculus GN=Grxcr1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.489e-23
Identity = 63/150 (42.00%), Postives = 86/150 (57.33%), Query Frame = 3
Query:  279 DRIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKEL--QCVFGGKNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPKRQPGFVCGSCGDVKFVPCGNCSGS-----RKVFDEADGVPKRCLECNENGLNRC 707
            DR+V+Y T LR +R TFE C  VR IF+  RV  +E++++++  Y KEL  +C    +  +LP VFI G ++G A+ + SM E+GEL  +L    + Q    C SCG   F+PC  C GS     R  F +A    K C  CNENGL RC
Sbjct:  137 DRVVIYTTCLRVVRTTFERCELVRKIFQNHRVKFEEKNIALNGDYGKELDERCRRVSEAPSLPVVFIDGHYLGGAEKILSMNESGELQDLLTKIERVQHPHECPSCGGFGFLPCSVCHGSKMSVFRNCFTDAFKALK-CTACNENGLQRC 285          
BLAST of EY736059 vs. ExPASy Swiss-Prot
Match: GRCR1_DROME (Glutaredoxin domain-containing cysteine-rich protein CG31559 OS=Drosophila melanogaster GN=CG31559 PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 3.217e-21
Identity = 49/146 (33.56%), Postives = 85/146 (58.22%), Query Frame = 3
Query:  282 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPKRQPGFVCGSCGDVKFVPCGNCSGSRKVFDE----ADGVPKRCLECNENGLNRC 707
            ++V+Y TS+  IR T+  C  V+ I R   V  +ERDV M   Y+ E++       V +PQ+++ G+H+G+A+ ++ M E+GEL ++L  +      + C +CG  + +PC +C+GS+K        A+ V  +C+ C+E GL +C
Sbjct:  306 KVVLYTTSMGIIRETYTKCANVKQILRTLLVKFEERDVFMSVEYQAEMRQRMQSGQVRVPQLYVEGQHIGDAETVERMNESGELRQLLKPYKSMASTYTCQTCGGYRLLPCPSCNGSKKSVHRNHFTAEFVALKCMNCDEVGLVKC 451          
BLAST of EY736059 vs. ExPASy Swiss-Prot
Match: GRCR2_DROME (Glutaredoxin domain-containing cysteine-rich protein CG12206 OS=Drosophila melanogaster GN=CG12206 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.085e-20
Identity = 46/148 (31.08%), Postives = 88/148 (59.46%), Query Frame = 3
Query:  282 RIVVYLTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDVSMDSAYKKELQCVFGGKNVTLPQVFIRGKHVGNADVLKSMYETGELARVLDGFPKRQPGFVCGSCGDVKFVPCGNCSGSRKVFDE----ADGVPKRCLECNENGLNRCPD 713
            ++V+Y TS+  IR T+  C  V+ I R   +  +ERD+ M   Y++E++     + + +PQ+F+ G+ +G+A++++ + E+GEL ++L  +      + C +CG  + +PC  C+GS+K        A+ V  +C+ C+E GL +CP+
Sbjct:  434 KVVLYTTSMGIIRDTYAKCANVKKILRTLLIKFEERDIFMSVEYQQEMRERMQDETIRVPQLFVEGQLIGDANIVERLNESGELRQLLRPYKSIATAYTCQTCGGYRMLPCPACNGSKKSMHRNHFTAEFVALKCMNCDEVGLIKCPN 581          
The following BLAST results are available for this feature:
BLAST of EY736059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
Y5986_ARATH1.303e-3043.37Uncharacterized protein At5g39865 OS=Arabidopsis t... [more]
Y3885_ARATH7.150e-2939.89Uncharacterized protein At3g28850 OS=Arabidopsis t... [more]
GRCR1_HUMAN2.015e-2339.52Glutaredoxin domain-containing cysteine-rich prote... [more]
GRCR1_MOUSE4.489e-2342.00Glutaredoxin domain-containing cysteine-rich prote... [more]
GRCR1_DROME3.217e-2133.56Glutaredoxin domain-containing cysteine-rich prote... [more]
GRCR2_DROME2.085e-2031.08Glutaredoxin domain-containing cysteine-rich prote... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-009-E04-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736059 ID=EY736059; Name=EY736059; organism=Citrus sinensis; type=EST; length=847bp
CACGCGTCCGCGAAATCAATTATGCTTCTCTCAATCGGGCCGTTTCGAGC
AATAAGTTTTACAATTCGATGGAATCAGTCTTATCTGCTAGCAATTCATT
CAAAGGTAAGGTCAAGCAACTTCGTAATTTATTTGAGCCCAAAAAATCAT
CCAAAAAAATTAATTTAAACGAACCCGAATCCCCGCAACAGCACCACCTC
ATCAAGTTAACAAAACCCGTGAAATCTTTATCTTTGTGTTATAATAATGA
GTCTTCGATTAGATTACCGGGTACTGAGGATCGAATTGTTGTTTATTTAA
CGAGTCTGAGAGGGATTCGAAGGACTTTTGAGGATTGTTATGCGGTTAGG
ATGATATTTAGAGGGTTTAGAGTTTGGGTTGACGAGAGAGATGTTTCGAT
GGATTCCGCGTATAAGAAAGAATTACAGTGTGTATTTGGTGGGAAGAATG
TGACTTTGCCGCAGGTTTTTATCCGGGGAAAGCATGTGGGAAATGCTGAT
GTGTTGAAGAGTATGTATGAAACCGGTGAATTGGCTAGGGTTCTTGATGG
GTTCCCTAAACGGCAACCTGGGTTCGTGTGTGGGAGTTGTGGGGATGTGA
AGTTCGTCCCTTGTGGGAATTGTAGTGGGAGTCGGAAGGTGTTTGATGAG
GCCGATGGTGTGCCTAAACGGTGCTTGGAATGTAACGAGAATGGCTTGAA
TCGTTGCCCTGATGGCTGCTCCTCGTGATNGTGCTTTCTTTTGGTGTGTC
ATGATGTTTTCATGATGTGTAATGATGTCCATATATTGGTTGTAATTGTA
TGTATTCCAAATGGGTCCTTTGGATTCATTTATGGGTTCCTTCCATT
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