EY736056

Overview
NameEY736056
Unique NameEY736056
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12567 contig Csv1_Contig12567:41..908. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY736056 vs. ExPASy Swiss-Prot
Match: THI4_CITSI (Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1)

HSP 1 Score: 405.601 bits (1041), Expect = 1.873e-112
Identity = 211/229 (92.14%), Postives = 212/229 (92.58%), Query Frame = 1
Query:   97 MAAMASTAFAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKXXXXXXXXXXXXALVSMNHDTQSCMDPNV 783
            MAAMASTAFAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTD    GAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWL GQLFSAMVVRKPAHIFLDELGIDYDEQD+YVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK            ALVSMNHDTQSCMDPNV
Sbjct:    1 MAAMASTAFAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNV 228          
BLAST of EY736056 vs. ExPASy Swiss-Prot
Match: THI4_ALNGL (Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 4.071e-83
Identity = 157/207 (75.85%), Postives = 174/207 (84.06%), Query Frame = 1
Query:  163 SSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKXXXXXXXXXXXXALVSMNHDTQSCMDPNV 783
            SSF+G P++PS +R+QP K+    ++S+S + SPPYDL  F FDPIKESIVSREMTRRYM DMITYADTD    GAGS+GL C YELSKNP++Q+AIIEQSVSPGGGAWL GQLFS MVVRKPAH+FLDELGI+YDEQD+YVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK            ALVSMNHDTQSCMDPNV
Sbjct:   20 SSFYGTPLAPSSIRVQPTKAGAKPSISMSGAPSPPYDLKAFTFDPIKESIVSREMTRRYMMDMITYADTDVVVVGAGSSGLVC-YELSKNPSVQVAIIEQSVSPGGGAWLGGQLFSGMVVRKPAHLFLDELGIEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNV 224          
BLAST of EY736056 vs. ExPASy Swiss-Prot
Match: THI4_ARATH (Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 4.212e-80
Identity = 160/230 (69.57%), Postives = 184/230 (80.00%), Query Frame = 1
Query:   97 MAAMASTAFAPSVSSTT-NKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKXXXXXXXXXXXXALVSMNHDTQSCMDPNV 783
            MAA+AST    S+SST   +LFDSSFHG+ +S + + +      +P + S+ A+ +  YDLN F FDPIKESIVSREMTRRYMTDMITYA+TD    GAGSAGLS AYE+SKNPN+Q+AIIEQSVSPGGGAWL GQLFSAM+VRKPAH+FLDE+G+ YDEQD+YVV+KHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK            ALV+ NH TQSCMDPNV
Sbjct:    1 MAAIASTL---SLSSTKPQRLFDSSFHGSAISAAPISI----GLKPRSFSVRATTAG-YDLNAFTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GNRVGGVVTNWALVAQNHHTQSCMDPNV 221          
BLAST of EY736056 vs. ExPASy Swiss-Prot
Match: THI41_MAIZE (Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 4.511e-74
Identity = 151/227 (66.52%), Postives = 170/227 (74.89%), Query Frame = 1
Query:  136 SSTTNKLFDSSFHGAPMSPSLLRLQPIK----------SSRPNNLSISASAS-PPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKXXXXXXXXXXXXALVSMNHDTQSCMDPNV 783
            ++  + L  SSF G+ + P+  R  P             + P   S+S S+S PPYDL +F+F PIKESIVSREMTRRYMTDMITYADTD    GAGSAGLSCAYELSK+P + IAI+EQSVSPGGGAWL GQLFSAMVVRKPAH+FLDELG+ YDE + YVVIKHAALFTST+MS LLARPNVKLFNAVA EDLIV+            ALVSMNHDTQSCMDPNV
Sbjct:    3 TAAASSLLKSSFAGSRL-PAATRTTPASLVVATGPRGAGAGPICASMSMSSSNPPYDLTSFRFSPIKESIVSREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKDPAVSIAIVEQSVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGVAYDEAEDYVVIKHAALFTSTVMSLLLARPNVKLFNAVAVEDLIVR-GGRVGGVVTNWALVSMNHDTQSCMDPNV 227          
BLAST of EY736056 vs. ExPASy Swiss-Prot
Match: THI42_MAIZE (Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 5.892e-74
Identity = 148/225 (65.78%), Postives = 169/225 (75.11%), Query Frame = 1
Query:  136 SSTTNKLFDSSFHGAPMSPSLLRLQ---------PIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKXXXXXXXXXXXXALVSMNHDTQSCMDPNV 783
            ++  + L  SSF G+ + PS  R           P     P   SIS S +PPYDL +F+F PIKESIVSREMTRRYMTDMIT+ADTD    GAGSAGLSCAYELSK+P + +AI+EQSVSPGGGAWL GQLFSAMVVR+PAH+FLDELG+ YDE + YVV+KHAALFTST+MS+LLARPNVKLFNAVA EDLIV+            ALVSMNHDTQSCMDPNV
Sbjct:    3 TTAASSLLKSSFAGSRL-PSATRTTTPSSVAVATPRAGGGPIRASIS-SPNPPYDLTSFRFSPIKESIVSREMTRRYMTDMITHADTDVVIVGAGSAGLSCAYELSKDPTVSVAIVEQSVSPGGGAWLGGQLFSAMVVRRPAHLFLDELGVGYDEAEDYVVVKHAALFTSTVMSRLLARPNVKLFNAVAVEDLIVR-RGRVGGVVTNWALVSMNHDTQSCMDPNV 224          
BLAST of EY736056 vs. ExPASy Swiss-Prot
Match: THI2_SCHPO (Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 8.278e-52
Identity = 106/183 (57.92%), Postives = 134/183 (73.22%), Query Frame = 1
Query:  250 ASASPPYDLN-TFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYEL-SKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK----XXXXXXXXXXXXALVSMNHDTQSCMDPN 780
            + A P Y L+ +F F PI+ES VSR MTRRY +D+  YA++D    GAGSAGL+ AY + ++ P+++IAIIE SV+PGGGAWL GQLFSAMVVRKPA +FL+E+G+ Y+++  YVV+KHAALFTST+M++ LA PNVKLFNA A EDLIVK                 LVS+NH  QSCMDPN
Sbjct:   37 SKAYPTYSLDESFSFAPIRESTVSRAMTRRYFSDLDKYAESDIVIVGAGSAGLTAAYYIGTRRPDLKIAIIEASVAPGGGAWLGGQLFSAMVVRKPADLFLNEIGVPYEDEGDYVVVKHAALFTSTVMARTLALPNVKLFNATAVEDLIVKEGKDGKQRIAGVVTNWTLVSLNHGLQSCMDPN 219          
BLAST of EY736056 vs. ExPASy Swiss-Prot
Match: THI4_FUSOX (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 3.478e-50
Identity = 103/170 (60.59%), Postives = 123/170 (72.35%), Query Frame = 1
Query:  283 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK---XXXXXXXXXXXXALVSMNHDTQSCMDPN 780
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS AY L K  P+++IAIIE SVSPGGGAWL GQLFSAM++RKPA  FL E+G+ Y+++ +YVV+KHAALFTSTIMSK+L  PN+KLFNA   EDLI +                LVSM+HD QSCMDPN
Sbjct:   44 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIIGAGSCGLSAAYILGKKRPDLKIAIIEASVSPGGGAWLGGQLFSAMIMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVLQMPNIKLFNATCVEDLITRPSEEGVRIAGVVTNWTLVSMHHDDQSCMDPN 213          
BLAST of EY736056 vs. ExPASy Swiss-Prot
Match: THI4_FUSSH (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.254e-49
Identity = 104/170 (61.18%), Postives = 121/170 (71.18%), Query Frame = 1
Query:  283 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIV---KXXXXXXXXXXXXALVSMNHDTQSCMDPN 780
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS  Y L K  P+++IAIIE SVSPGGGAWL GQLFSAMV+RKPA  FL E+G+ Y+++ +YVV+KHAALFTSTIMSK+L  PN KLFNA   EDLI    K             LVSM+HD QSCMDPN
Sbjct:   48 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIVGAGSCGLSTRYILGKKRPDLKIAIIEASVSPGGGAWLGGQLFSAMVMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVLQLPNCKLFNATCVEDLITRPSKEGVRISGVVTNWTLVSMHHDDQSCMDPN 217          
BLAST of EY736056 vs. ExPASy Swiss-Prot
Match: THI4_UROFA (Thiazole biosynthetic enzyme, mitochondrial OS=Uromyces fabae GN=THI2 PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.559e-49
Identity = 102/202 (50.50%), Postives = 134/202 (66.34%), Query Frame = 1
Query:  205 LQPIKSSRPNNLSISASA---SPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYEL-SKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK------XXXXXXXXXXXXALVSMNHDTQSCMDPN 780
            + P+KS + +N +++  A    P  +L   KF PIKE  V R M RRY  DM   A +D    GAGSAGLSCAY L +  P+++I I+E +V+PGGG WL GQL SAMV RKPA  FLD++G+ Y+++ ++VV+KHAALFTST++SK+LA PNVK+FNA A EDLI+K                   LVS+NHD QSCMDP+
Sbjct:   24 MDPLKSKQQSNATVNKPAFKPEPAVNLTPIKFAPIKEHQVQRAMVRRYFQDMEERAISDVIIVGAGSAGLSCAYALGTARPDLKITILESNVAPGGGCWLGGQLMSAMVCRKPADEFLDQVGVPYEDEGNFVVVKHAALFTSTVLSKVLAMPNVKMFNATACEDLIIKPCPINPGVQRIAGCVTNWTLVSLNHDHQSCMDPS 225          
BLAST of EY736056 vs. ExPASy Swiss-Prot
Match: THI4_ASPOR (Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 2.493e-48
Identity = 101/173 (58.38%), Postives = 126/173 (72.83%), Query Frame = 1
Query:  283 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSK-NPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDE--QDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK----XXXXXXXXXXXXALVSMNHDTQSCMDPN 780
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS AY L+K  P+++IAI+E SVSPGGGAWL GQLFSAMV+R+PA +FL+ELG+ Y+E    +YVV+KHA+LFTST+MSK+L+ PNVKLFNA A EDLI +                 LV+++HD  SCMDPN
Sbjct:   48 FKFAPIRESQVSRAMTRRYFEDLDKYAESDVVIVGAGSCGLSTAYVLAKARPDLKIAIVEASVSPGGGAWLGGQLFSAMVMRRPAEVFLNELGVPYEEDANPNYVVVKHASLFTSTLMSKVLSFPNVKLFNATAVEDLITRPTENGNPQIAGVVVNWTLVTLHHDDHSCMDPN 220          
The following BLAST results are available for this feature:
BLAST of EY736056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
THI4_CITSI1.873e-11292.14Thiazole biosynthetic enzyme, chloroplastic OS=Cit... [more]
THI4_ALNGL4.071e-8375.85Thiazole biosynthetic enzyme, chloroplastic OS=Aln... [more]
THI4_ARATH4.212e-8069.57Thiazole biosynthetic enzyme, chloroplastic OS=Ara... [more]
THI41_MAIZE4.511e-7466.52Thiazole biosynthetic enzyme 1-1, chloroplastic OS... [more]
THI42_MAIZE5.892e-7465.78Thiazole biosynthetic enzyme 1-2, chloroplastic OS... [more]
THI2_SCHPO8.278e-5257.92Thiazole biosynthetic enzyme, mitochondrial OS=Sch... [more]
THI4_FUSOX3.478e-5060.59Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI4_FUSSH2.254e-4961.18Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI4_UROFA6.559e-4950.50Thiazole biosynthetic enzyme, mitochondrial OS=Uro... [more]
THI4_ASPOR2.493e-4858.38Thiazole biosynthetic enzyme, mitochondrial OS=Asp... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-009-D12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736056 ID=EY736056; Name=EY736056; organism=Citrus sinensis; type=EST; length=872bp
CCACGCGTCCGCGGACGCGTGGGCTGCTGCAAATCAAATTACTTCTCATT
ATCAAACTTCTAANCAGCAGGGGAAGGAGGGGTAAAAAAAAAAAACATGG
CAGCCATGGCTTCTACAGCTTTCGCTCCTTCAGTTTCGTCTACCACCAAT
AAGCTCTTTGACTCATCCTTTCATGGGGCTCCCATGTCACCTTCTCTTCT
ACGTCTTCAACCCATCAAATCTTCTCGTCCCAACAACTTGTCCATTTCTG
CTTCTGCTTCTCCTCCTTATGACTTGAACACTTTCAAGTTTGACCCCATC
AAAGAATCCATTGTTTCTCGTGAAATGACGCGCAGGTACATGACGGACAT
GATCACTTATGCTGACACTGATGTGGTAGTGGTTGGTGCTGGCTCTGCTG
GCCTCTCTTGTGCTTATGAGCTCAGCAAAAACCCCAACATTCAGATTGCT
ATTATCGAACAGTCTGTTAGCCCCGGCGGTGGCGCGTGGCTCAGTGGACA
GCTCTTCTCTGCCATGGTTGTGCGCAAACCAGCCCACATCTTCCTTGACG
AGCTTGGCATCGACTACGATGAGCAAGACAGCTATGTTGTGATCAAGCAT
GCAGCGCTGTTCACCTCCACTATAATGAGCAAGCTCCTGGCCCGCCCCAA
CGTCAAGCTCTTTAATGCAGTGGCAGCCGAGGACTTGATAGTCAAAGGCG
GCAGAGTTGGTGGGTGTGGGTGACCAACTGGGGCGTTGGTGTCAATGAAT
CACGATACACAGTCTTGCATGGATCCCAATGTATGGAGCGAGGGTGGTGG
AGCCTTGTGCATATGGGCTTTGGGCCTGATAAGTGAATCGAATAATCAAG
CGAACCATGGCGGCTACGACAG
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