EY736051

Overview
NameEY736051
Unique NameEY736051
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4628 contig Csv1_Contig4628:1..850. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY736051 vs. ExPASy Swiss-Prot
Match: FKB42_ARATH (42 kDa peptidyl-prolyl isomerase OS=Arabidopsis thaliana GN=FKBP42 PE=1 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.469e-11
Identity = 27/44 (61.36%), Postives = 36/44 (81.82%), Query Frame = 3 
Query:  663 EDENNVKALFRRGKARAELGQTDAAREDFLXAGKFAPEEQSXAR 794
            E+E N KALFRRGKA+AELGQ D+AR+DF  A K+AP++++  R
Sbjct:  259 EEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRR 302

HSP 2 Score: 31.187 bits (69), Expect = 1.469e-11
Identity = 14/18 (77.78%), Postives = 16/18 (88.89%), Query Frame = 1 
Query:  796 ELRLLAEHEKAVYKKQKE 849
            ELR LAE EKA+Y+KQKE
Sbjct:  303 ELRALAEQEKALYQKQKE 320
The following BLAST results are available for this feature:
BLAST of EY736051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FKB42_ARATH1.469e-1161.3642 kDa peptidyl-prolyl isomerase OS=Arabidopsis th... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-009-D06-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736051 ID=EY736051; Name=EY736051; organism=Citrus sinensis; type=EST; length=851bp
CCACGCGTCCGGTAAATGATTTGAGACCTCTTAGGTGATATTCTAATAGT
CTTTTTAATTTTAGAATTTTCCGAGCCGCTCATGTTGAAAAATGAAAGGC
AGAGGCCTGAAATTTTTTTGTTTGATTTTTTGGTGCTAAACAAAATATTA
TTATAACTGGAAGGAACAATTAGTAAAGAAGCATGCACAGCTAGTTGACT
AATGAATCCACAGACCAGACTCTTTGCGGAGCATAGTAAACCAGCAAAGG
CCTTACTAAATCAAGGCTTGAAATAAACATAACTGAAGCTGACTTACCAA
ATTGATGGGATTAATGACGTGTCTTGAAAGTAGTTGGTGCTTGCTTCATA
ATTTTAGGGTCAAGTTGATTCTTGGTAAGATTGGGGGAAGTGTGTTTGTG
TTCCTTTGGGGTATTTGGGAATCAAATCTGATTGTCTTATTTTGCCACAT
TTATCTGTGCTGCTTTCAGCTAATTCGACTTCACCATATTGAGTTGTCCA
GAAAATGATATCATTGTCTGCGGCTCCAACATTTCGGCATTATCCTGCCA
TCTCTCTCTTTCATAGACAAACTCAGACAGTCAAACTCATTTATGTTAAA
CCCTATGCACATTGAACTTCACCCTCTCTGGGATTGCATGATGGACTTGC
AGGTATTGNNGAGAGGATGAAAATAATGTGAAGGCCCTTTTCAGACGAGG
AAAGGCCAGAGCAGAACTTGGGCAAACAGATGCTGCCCGGGAAGACTTTC
TANAGGCAGGTAAATTTGCACCTGAAGAACAATCANTTGCACGGGGAGCT
TCGTTTGCTCGCTGAACATGAAAAAGCTGTATACAAGAAGCAAAAGGAGA
T
back to top