EY735939
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY735939 vs. ExPASy Swiss-Prot
Match: TCP4_ARATH (Transcription factor TCP4 OS=Arabidopsis thaliana GN=TCP4 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.802e-26 Identity = 94/285 (32.98%), Postives = 138/285 (48.42%), Query Frame = 2 Query: 11 QEGKSSIDKLAELPPWQPSTSNNNAATEAEPNMGSSEMAI-------QEQSESSGYSFQIHRQLG--DHNANNDSTFMSPPPLDTDAIADTIKSFFPT--STTASAIN---FQNY----PAGILTRSANPTEDLGLSLHTAFQD--PGLIHGQSRGDTSHTTSADQTPFAGSAPVGFDSS-----------FQRMLAWNN--ETSAETRGTGG-----------XXXXXXXXXXXXXXXXRGPLQSSFTQSVRAWDDIPXGKTHEIQQSSVFGMPAGCNIPTPIH 733 ++ K+SID+LAELPPW P+ + AA A+P +++ I Q+Q + F + G +H +NN+S+F+ PP +D+D+IADTIKSFFP S+T + N NY P +L+R+ + +DL LSL +F D P L+H Q TS + S + S P+GFD+S QR++AWN+ A G GG RGPLQSS++ +RAW D H Q S + ++P P+H Sbjct: 94 KKAKTSIDELAELPPWNPADAIRLAAANAKPRRTTAKTQISPSPPPPQQQQQQQQLQFGVGFNGGGAEHPSNNESSFL-PPSMDSDSIADTIKSFFPVIGSSTEAPSNHNLMHNYHHQHPPDLLSRTNSQNQDLRLSLQ-SFPDGPPSLLHHQHHHHTSASASEPTLFYGQSNPLGFDTSSWEQQSSEFGRIQRLVAWNSGGGGGATDTGNGGGFLFAPPTPSTTSFQPVLGQSQQLYSQRGPLQSSYSPMIRAWFD----PHHHHQSISTDDLNHHHHLPPPVH 372
BLAST of EY735939 vs. ExPASy Swiss-Prot
Match: PCF5_ORYSJ (Transcription factor PCF5 OS=Oryza sativa subsp. japonica GN=PCF5 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.058e-18 Identity = 87/302 (28.81%), Postives = 118/302 (39.07%), Query Frame = 2 Query: 11 QEGKSSIDKLAELPPWQPSTSNNNAATEAEPNMGSSEMAIQEQSESSGYSFQI-HRQLGDHNANNDSTFMSPPPLDTDAIADTIKSFFP----------TSTTA---SAINFQNYPAGILTRSANPTEDLGLSLHTAFQDPGLIHGQSR---GDTSHTTSADQTPFAGSAPVGF----------DSSFQRMLAWNNETSAETRGTGG---------------XXXXXXXXXXXXXXXXRGPLQSSFTQSVRAWDDI----------PXGKTHEIQQSSVFGMP----AGCNIPTPIHGQNHH 748 + K +IDKL LP WQP+ A A P S+ E S+ + + H + T PP LD+DAIADTIKSFFP +STTA SA+ FQ+Y +L+R+ + +++L LSL + DP H Q R G + Q F+G+A F + QRML WN + G GG RGPLQSS S R W + G + + + F P +G +P I G H Sbjct: 138 KNAKDAIDKLDVLPAWQPTAGGAGAGNAAAPPSSSTHPDSAENSDDQAQAITVAHTAFDFAGGGSGGTSFLPPSLDSDAIADTIKSFFPMGGTAGGEASSSTTAAQSSAMGFQSYTPDLLSRTGSQSQELRLSLQ-SLPDPMFHHQQHRHGGGGGGGNGTTQQALFSGAANYSFGGGAMWATEQQAQNQRMLPWN---VPDPGGGGGAAYLFNVSQQAAHMQAAAAALGGHQSQFFFQRGPLQSSNQPSERGWPETVEADNQMSHHQGGLSPSVSAAIGFAAPGIGFSGFRLPARIQGDEEH 435
BLAST of EY735939 vs. ExPASy Swiss-Prot
Match: PCF5_ORYSI (Transcription factor PCF5 OS=Oryza sativa subsp. indica GN=PCF5 PE=4 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.058e-18 Identity = 87/302 (28.81%), Postives = 118/302 (39.07%), Query Frame = 2 Query: 11 QEGKSSIDKLAELPPWQPSTSNNNAATEAEPNMGSSEMAIQEQSESSGYSFQI-HRQLGDHNANNDSTFMSPPPLDTDAIADTIKSFFP----------TSTTA---SAINFQNYPAGILTRSANPTEDLGLSLHTAFQDPGLIHGQSR---GDTSHTTSADQTPFAGSAPVGF----------DSSFQRMLAWNNETSAETRGTGG---------------XXXXXXXXXXXXXXXXRGPLQSSFTQSVRAWDDI----------PXGKTHEIQQSSVFGMP----AGCNIPTPIHGQNHH 748 + K +IDKL LP WQP+ A A P S+ E S+ + + H + T PP LD+DAIADTIKSFFP +STTA SA+ FQ+Y +L+R+ + +++L LSL + DP H Q R G + Q F+G+A F + QRML WN + G GG RGPLQSS S R W + G + + + F P +G +P I G H Sbjct: 262 KNAKDAIDKLDVLPAWQPTAGGAGAGNAAAPPSSSTHPDSAENSDDQAQAITVAHTAFDFAGGGSGGTSFLPPSLDSDAIADTIKSFFPMGGTAGGEASSSTTAAQSSAMGFQSYTPDLLSRTGSQSQELRLSLQ-SLPDPMFHHQQHRHGGGGGGGNGTTQQALFSGAANYSFGGGAMWATEQQAQNQRMLPWN---VPDPGGGGGAAYLFNVSQQAAHMQAAAAALGGHQSQFFFQRGPLQSSNQPSERGWPETVEADNQMSHHQGGLSPSVSAAIGFAAPGIGFSGFRLPARIQGDEEH 559
BLAST of EY735939 vs. ExPASy Swiss-Prot
Match: TCP3_ARATH (Transcription factor TCP3 OS=Arabidopsis thaliana GN=TCP3 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.647e-17 Identity = 79/243 (32.51%), Postives = 115/243 (47.33%), Query Frame = 2 Query: 14 EGKSSIDKLAELPPWQPS-TSNNNAATEAEPNMGSSEMAIQE---QSESSGYSFQIHRQLGDHNANNDSTFMSPPPLDTDAIADTIKSFFPTSTTASAINFQNYPAGILTRSANPTEDLGLSLHTAFQ---------DPGLIHGQSRGDTSHTTSADQTPFAGSAPVGFDSSFQRMLAWNNETSAETRG-TGG-----XXXXXXXXXXXXXXXXRGPLQSSFTQSVRAWDDIPXGKTHEIQQS 685 + KS+ID LA+LPPW P+ T +AA A ++ I Q E + H ++G+ +N+S+F+ P +D+D+IADTIKSFFP ++T + + Q G + + L LSL +FQ +P L GQS + +S + +P QR+++WNN +AE+ G TGG RGPLQS T +RAW D P H QQS Sbjct: 99 KAKSAIDDLAQLPPWNPADTLRQHAAAAANAKPRKTKTLISPPPPQPEETE-----HHRIGEEE-DNESSFL-PASMDSDSIADTIKSFFPVASTQQSYHHQPPSRG----NTQNQDLLRLSLQ-SFQNGPPFPNQTEPALFSGQSNNQLAFDSSTASWEQSHQSPE--FGKIQRLVSWNNVGAAESAGSTGGFVFASPSSLHPVYSQSQLLSQRGPLQSINTPMIRAWFD-PHHHHHHHQQS 326 The following BLAST results are available for this feature:
BLAST of EY735939 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY735939 ID=EY735939; Name=EY735939; organism=Citrus sinensis; type=EST; length=872bpback to top |