EY735930
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY735930 vs. ExPASy Swiss-Prot
Match: NMD3_XENLA (60S ribosomal export protein NMD3 OS=Xenopus laevis GN=nmd3 PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 4.981e-73 Identity = 100/190 (52.63%), Postives = 138/190 (72.63%), Query Frame = 2 Query: 17 LQKHVIISHCPECDCYLQPPRTWIKAQLESKELLTFCVKRLK-NLNRVRLVNAEFIWTEPHSKRIKVKLKVQKEVLNGAILEQSYVVEYVQQDHMCDSCSRVQANPDQWVAAVQLRQHVTHRRTFFYLEQLILKHDAAARAIRITQMDQGIDFFFGNRSHAVKFVEFVGKVAPVRSRHDKQLVSHDPKSN 583 + K V + C +C+ YLQPP TWI+ LES+ELLT C+K+LK NL++VRL++A FIWTEPHSKR+KVKL +QKEV+NGAIL+Q +VV+YV Q MCD C RV+A D W A VQ+RQ V H++TF+YLEQ ILKH +R+ ++ G+DF++ ++ H K VEF+ P R + ++L+SHD +N Sbjct: 46 IPKQVSVHFCKQCERYLQPPGTWIQCALESRELLTLCLKKLKANLSKVRLIDAGFIWTEPHSKRLKVKLTIQKEVMNGAILQQVFVVDYVVQAQMCDDCHRVEAK-DFWKAVVQVRQKVLHKKTFYYLEQTILKHRLHQNTLRVKEIHDGLDFYYASKQHGQKMVEFLQCTVPCRFKASQRLISHDIHTN 234 HSP 2 Score: 83.1889 bits (204), Expect = 4.981e-73 Identity = 35/65 (53.85%), Postives = 51/65 (78.46%), Query Frame = 1 Query: 586 FNYKYTFSVEISPICREDLICLPPKVAVSLGNLGPLVICMKVTNSIALLDPFTLRHCFLDGDQYW 780 +NYK TFSVEI P+C+++L+CL PK+A SLGN+ + IC +VT++I L+DP TL+ +DG+ YW Sbjct: 236 YNYKSTFSVEIVPVCKDNLVCLSPKLAQSLGNMNQICICARVTSTIHLIDPSTLQIAEVDGNTYW 300
BLAST of EY735930 vs. ExPASy Swiss-Prot
Match: NMD3_DICDI (60S ribosomal export protein NMD3 OS=Dictyostelium discoideum GN=nmd3 PE=3 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 1.105e-72 Identity = 97/189 (51.32%), Postives = 138/189 (73.02%), Query Frame = 2 Query: 17 LQKHVIISHCPECDCYLQPPRTWIKAQLESKELLTFCVKRLKNLNRVRLVNAEFIWTEPHSKRIKVKLKVQKEVLNGAILEQSYVVEYVQQDHMCDSCSRVQANPDQWVAAVQLRQHVTHRRTFFYLEQLILKHDAAARAIRITQMDQGIDFFFGNRSHAVKFVEFVGKVAPVRSRHDKQLVSHDPKSN 583 + K + I C C YLQPP W A+LES+ELLT C+KR+K LN+V+LV+A ++WTEPHSKR+KVKL +QKEV AIL+Q +++E++ Q CD C + +A D W + VQLRQ V H+RTF Y+EQLILKH+A ++ + I + G+DFFF NR+HA+KFVEF+ + PV+++ +QL+S D ++N Sbjct: 43 IPKQLTIQWCRGCARYLQPPNHWAIAELESRELLTICIKRIKGLNKVKLVDAGWVWTEPHSKRLKVKLTIQKEVFTSAILQQIFIIEFIVQGQQCDKCQKFEAK-DTWNSVVQLRQKVDHKRTFLYIEQLILKHNAHSQTLNIKEKPDGLDFFFSNRNHAMKFVEFISAITPVKTKKSEQLISSDEQNN 230 HSP 2 Score: 77.7962 bits (190), Expect = 1.105e-72 Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = 1 Query: 589 NYKYTFSVEISPICREDLICLPPKVAVSLGNLGPLVICMKVTNSIALLDPFTLRHCFLDGDQYW 780 NYKYTFSVEI P+ ++D++CLPPK+A LGN+GPLV+ KV+N I +DP TL + +W Sbjct: 233 NYKYTFSVEIVPLSKDDIVCLPPKIAHQLGNMGPLVVVTKVSNLIHFIDPNTLHTGEISALTFW 296
BLAST of EY735930 vs. ExPASy Swiss-Prot
Match: NMD3_MOUSE (60S ribosomal export protein NMD3 OS=Mus musculus GN=Nmd3 PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.436e-69 Identity = 95/188 (50.53%), Postives = 134/188 (71.28%), Query Frame = 2 Query: 23 KHVIISHCPECDCYLQPPRTWIKAQLESKELLTFCVKRLKN-LNRVRLVNAEFIWTEPHSKRIKVKLKVQKEVLNGAILEQSYVVEYVQQDHMCDSCSRVQANPDQWVAAVQLRQHVTHRRTFFYLEQLILKHDAAARAIRITQMDQGIDFFFGNRSHAVKFVEFVGKVAPVRSRHDKQLVSHDPKSN 583 K V IS C +C Y QPP +W++ LES+ELL C+K++K L++VRLV+A F+WTEPHSKR+KVKL +QKEV+NGAIL+Q +VV+YV Q MC C RV+A D W A +Q+RQ H++TF+YLEQLILK+ +RI ++ G+DF++ ++ HA K VEF+ + P R + ++L+S D SN Sbjct: 48 KQVSISFCKQCQRYFQPPASWVQCALESRELLALCLKKIKAPLSKVRLVDAGFVWTEPHSKRLKVKLTIQKEVMNGAILQQVFVVDYVVQSQMCGDCHRVEAK-DFWKAVIQVRQKTLHKKTFYYLEQLILKYGMHQNTLRIKEIHDGLDFYYSSKQHAQKMVEFLQGIVPCRYKASQRLISQDIHSN 234 HSP 2 Score: 81.6481 bits (200), Expect = 1.436e-69 Identity = 34/65 (52.31%), Postives = 52/65 (80.00%), Query Frame = 1 Query: 586 FNYKYTFSVEISPICREDLICLPPKVAVSLGNLGPLVICMKVTNSIALLDPFTLRHCFLDGDQYW 780 +NYK TFSVEI PIC+++++CL PK+A SLGN+ + IC++VT++I L+DP TL+ +DG+ +W Sbjct: 236 YNYKSTFSVEIVPICKDNVVCLSPKLAQSLGNMSQICICIRVTSAIHLIDPNTLQVADIDGNTFW 300
BLAST of EY735930 vs. ExPASy Swiss-Prot
Match: NMD3_BOVIN (60S ribosomal export protein NMD3 OS=Bos taurus GN=NMD3 PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 4.152e-69 Identity = 96/190 (50.53%), Postives = 134/190 (70.53%), Query Frame = 2 Query: 17 LQKHVIISHCPECDCYLQPPRTWIKAQLESKELLTFCVKRLKN-LNRVRLVNAEFIWTEPHSKRIKVKLKVQKEVLNGAILEQSYVVEYVQQDHMCDSCSRVQANPDQWVAAVQLRQHVTHRRTFFYLEQLILKHDAAARAIRITQMDQGIDFFFGNRSHAVKFVEFVGKVAPVRSRHDKQLVSHDPKSN 583 + K V IS C +C Y QPP TW++ LES++LL C+K++K L++VRLV+A F+WTEPHSKR+KVKL +QKEV+NGAIL+Q +VV+YV Q MC C RV+A D W A VQ+RQ H++TF+YLEQLILK+ +RI ++ G+DF++ ++ HA K VEF+ P R + ++L+S D SN Sbjct: 46 IPKQVSISFCKQCQRYFQPPGTWVQCALESRDLLALCLKKIKAPLSKVRLVDASFVWTEPHSKRLKVKLTIQKEVMNGAILQQVFVVDYVVQPQMCGDCHRVEAK-DFWKAVVQVRQKTLHKKTFYYLEQLILKYGMHQNTLRIKEIHDGLDFYYSSKQHAQKMVEFLQCTVPTRYKASQRLISQDIHSN 234 HSP 2 Score: 80.1073 bits (196), Expect = 4.152e-69 Identity = 33/65 (50.77%), Postives = 51/65 (78.46%), Query Frame = 1 Query: 586 FNYKYTFSVEISPICREDLICLPPKVAVSLGNLGPLVICMKVTNSIALLDPFTLRHCFLDGDQYW 780 +NYK TFSVEI PIC+++++CL PK+A SLGN+ + +C++VT+ I L+DP TL+ +DG+ +W Sbjct: 236 YNYKSTFSVEIVPICKDNVVCLSPKLAQSLGNMNQICVCIRVTSVIHLIDPNTLQVADIDGNTFW 300
BLAST of EY735930 vs. ExPASy Swiss-Prot
Match: NMD3_XENTR (60S ribosomal export protein NMD3 OS=Xenopus tropicalis GN=nmd3 PE=2 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 2.105e-55 Identity = 121/286 (42.31%), Postives = 175/286 (61.19%), Query Frame = 2 Query: 17 LQKHVIISHCPECDCYLQPPRTWIKAQLESKELLTFCVKRLK-NLNRVRLVNAEFIWTEPHSKRIKVKLKVQKEVLNGAILEQSYVVEYVQQDHMCDSCSRVQANPDQWVAAVQLRQHVTHRRTFFYLEQLILKHDAAARAIRITQMDQGIDFFFGNRSHAVKFVEFVGKVAPVRSRHDKQLVSHDPKSNISIISIHFQ*RSAPFVVRI*YVCL-----QKLQLVWEILVHLLSV*K*QIALRCWIHLL*DTVSWMVINIG-----RSSLESLVTTRQVGEYIVLE 841 + K V + C +C+ YLQPP TWI+ LES+ELLT C+K+LK NL++VRL++A FIWTEPHSKR+KVKL +QKEV+NGAIL+Q +VV+Y+ Q MCD C RV+A D W A VQ+RQ V H++TF+YLEQ ILKH +R+ ++ G+DF++ ++ HA K VEF+ P R + ++L+SHD +N F P V + VCL Q L + +I + + + IHL+ D + + + RS SL +Q+ E+IV++ Sbjct: 46 IPKQVSVHFCKQCERYLQPPGTWIQCALESRELLTLCLKKLKANLSKVRLIDAGFIWTEPHSKRLKVKLTIQKEVMNGAILQQVFVVDYIVQSQMCDDCHRVEAK-DFWKAVVQVRQKVLHKKTFYYLEQTILKHRLHQNTLRVKEIHDGLDFYYASKQHAQKMVEFLQCTVPCRFKASQRLISHDIHTNAYNYKSTFSVEIVP-VCKDNLVCLSPKLAQSLGNMNQICI--------CVRVTSTIHLI-DPSTLQIAEVDGNTYWRSPFNSLFHPKQLEEFIVMD 320
BLAST of EY735930 vs. ExPASy Swiss-Prot
Match: NMD3_DANRE (60S ribosomal export protein NMD3 OS=Danio rerio GN=nmd3 PE=2 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 3.970e-54 Identity = 117/286 (40.91%), Postives = 174/286 (60.84%), Query Frame = 2 Query: 17 LQKHVIISHCPECDCYLQPPRTWIKAQLESKELLTFCVKRLK-NLNRVRLVNAEFIWTEPHSKRIKVKLKVQKEVLNGAILEQSYVVEYVQQDHMCDSCSRVQANPDQWVAAVQLRQHVTHRRTFFYLEQLILKHDAAARAIRITQMDQGIDFFFGNRSHAVKFVEFVGKVAPVRSRHDKQLVSHDPKSNISIISIHFQ*RSAPFVVRI*YVCL-----QKLQLVWEILVHLLSV*K*QIALRCWIHLL*DTVSWMVINIG-----RSSLESLVTTRQVGEYIVLE 841 + K V I C +C+ YLQPP +W++ LES+ELL C+K+LK ++++VRL++A F+WTEPHSKRIK+KL +QKEV+NGAIL+Q + VE+V Q MC+ C RV+A D W A VQ+RQ H++TF+YLEQLILKH +RI ++ +GIDF++ + HA K V+F+ P RS+ ++L+SHD SN F P V + VCL Q L + ++ V + + IHL+ D + + + R SL + RQ+ E+I+++ Sbjct: 46 IPKQVTIHFCRQCERYLQPPGSWVQCALESRELLALCLKKLKASMSKVRLIDAGFLWTEPHSKRIKIKLTIQKEVMNGAILQQVFTVEFVVQGQMCEDCHRVEAK-DFWKAVVQVRQKTVHKKTFYYLEQLILKHKLHQNTVRIKEIHEGIDFYYATKQHAQKMVDFLQCTVPCRSKASQRLISHDVHSNTYNYKSTFSVEIVP-VCKDNVVCLSPRLAQSLGNMGQVCV--------CVRVTSSIHLI-DPNTLQIAEVDGSTFWRHPFNSLCSPRQLEEFIIMD 320
BLAST of EY735930 vs. ExPASy Swiss-Prot
Match: NMD3_SCHPO (60S ribosomal export protein nmd3 OS=Schizosaccharomyces pombe GN=nmd3 PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 7.488e-53 Identity = 100/209 (47.85%), Postives = 136/209 (65.07%), Query Frame = 2 Query: 35 ISHCPECDCYLQPPRTWIKAQLESKELLTFCVKRLKNLNRVRLVNAEFIWTEPHSKRIKVKLKVQKEVLNGAILEQSYVVEYVQQDHMCDSCSRVQANPDQWVAAVQLRQHVTHRRTFFYLEQLILKHDAAARAIRITQMDQGIDFFFGNRSHAVKFVEFVGKVAPVRSRHDKQLVSHDPKSNISIISIHFQ*RSAPFVVRI*YVCLQK 661 ++HC EC+ Y+QPP W+ A LES+EL+ C+K+L+ LN+VRLV+A FIWTEPHS+RIKVKL VQKE IL+QS+ VE+ + C C+R P W A Q+RQ V H+RTF YLEQ+ILKH A + I + GIDF+FG R+HA+K VEF+ V P+R + ++L+S D KSN + + P + + VCL K Sbjct: 59 VNHCRECERYMQPPNNWMIAPLESRELMAICLKKLRGLNQVRLVDANFIWTEPHSRRIKVKLTVQKEAFTNTILQQSFQVEFYVNNTQCPDCARTY-TPHIWKAVCQVRQKVLHKRTFLYLEQIILKHKAHMNTVNIKETKDGIDFYFGQRAHAIKMVEFLSAVVPIRYKGSEELISEDFKSNTANYKFTYSIEIVP-ICKDDLVCLPK 265 HSP 2 Score: 75.8702 bits (185), Expect = 3.400e-13 Identity = 33/64 (51.56%), Postives = 45/64 (70.31%), Query Frame = 1 Query: 589 NYKYTFSVEISPICREDLICLPPKVAVSLGNLGPLVICMKVTNSIALLDPFTLRHCFLDGDQYW 780 NYK+T+S+EI PIC++DL+CLP VA + GN+ LV+C KV +I LDP TL+ C + YW Sbjct: 243 NYKFTYSIEIVPICKDDLVCLPKTVAKAHGNIAQLVVCTKVGPTIRFLDPLTLQTCDMLPSIYW 306
BLAST of EY735930 vs. ExPASy Swiss-Prot
Match: NMD3_HUMAN (60S ribosomal export protein NMD3 OS=Homo sapiens GN=NMD3 PE=1 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 6.339e-52 Identity = 121/286 (42.31%), Postives = 171/286 (59.79%), Query Frame = 2 Query: 17 LQKHVIISHCPECDCYLQPPRTWIKAQLESKELLTFCVKRLKN-LNRVRLVNAEFIWTEPHSKRIKVKLKVQKEVLNGAILEQSYVVEYVQQDHMCDSCSRVQANPDQWVAAVQLRQHVTHRRTFFYLEQLILKHDAAARAIRITQMDQGIDFFFGNRSHAVKFVEFVGKVAPVRSRHDKQLVSHDPKSNISIISIHFQ*RSAPFVVRI*YVCL-----QKLQLVWEILVHLLSV*K*QIALRCWIHLL*DTVSWMVINIGRSS-----LESLVTTRQVGEYIVLE 841 + K V IS C +C Y QPP TWI+ LES+ELL C+K++K L++VRLV+A F+WTEPHSKR+KVKL +QKEV+NGAIL+Q +VV+YV Q MC C RV+A D W A +Q+RQ H++TF+YLEQLILK+ +RI ++ G+DF++ ++ HA K VEF+ P R + ++L+S D SN F P + + VCL Q L + +I V I + IHL+ D + V +I S+ SL +Q+ E+IV+E Sbjct: 46 IPKQVSISFCKQCQRYFQPPGTWIQCALESRELLALCLKKIKAPLSKVRLVDAGFVWTEPHSKRLKVKLTIQKEVMNGAILQQVFVVDYVVQSQMCGDCHRVEAK-DFWKAVIQVRQKTLHKKTFYYLEQLILKYGMHQNTLRIKEIHDGLDFYYSSKQHAQKMVEFLQCTVPCRYKASQRLISQDIHSNTYNYKSTFSVEIVP-ICKDNVVCLSPKLAQSLGNMNQICV--------CIRVTSAIHLI-DPNTLQVADIDGSTFWSHPFNSLCHPKQLEEFIVME 320
BLAST of EY735930 vs. ExPASy Swiss-Prot
Match: NMD3_PONAB (60S ribosomal export protein NMD3 OS=Pongo abelii GN=NMD3 PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.844e-51 Identity = 121/286 (42.31%), Postives = 171/286 (59.79%), Query Frame = 2 Query: 17 LQKHVIISHCPECDCYLQPPRTWIKAQLESKELLTFCVKRLKN-LNRVRLVNAEFIWTEPHSKRIKVKLKVQKEVLNGAILEQSYVVEYVQQDHMCDSCSRVQANPDQWVAAVQLRQHVTHRRTFFYLEQLILKHDAAARAIRITQMDQGIDFFFGNRSHAVKFVEFVGKVAPVRSRHDKQLVSHDPKSNISIISIHFQ*RSAPFVVRI*YVCL-----QKLQLVWEILVHLLSV*K*QIALRCWIHLL*DTVSWMVINIGRSS-----LESLVTTRQVGEYIVLE 841 + K V IS C +C Y QPP TWI+ LES+ELL C+K++K L++VRLV+A F+WTEPHSKR+KVKL VQKEV+NGAIL+Q +VV+YV Q MC C RV+A D W A +Q+RQ H++TF++LEQLILK+ +RI ++ G+DF++ ++ HA K VEF+ P R + ++L+S D SN F P + + VCL Q L + +I V I + IHL+ D + V +I S+ SL +Q+ E+IV+E Sbjct: 46 IPKQVSISFCKQCQRYFQPPGTWIQCALESRELLALCLKKIKAPLSKVRLVDAGFVWTEPHSKRLKVKLTVQKEVMNGAILQQVFVVDYVVQSQMCGDCHRVEAK-DFWKAVIQVRQKTLHKKTFYHLEQLILKYGMHQNTLRIKEIHDGLDFYYSSKQHAQKMVEFLQCTVPCRYKASQRLISQDIHSNTYNYKSTFSVEIVP-ICKDNVVCLSPKLAQSLGNMNQICV--------CIRVTSAIHLI-DPNTLQVADIDGSTFWSHPFNSLCHPKQLEEFIVME 320
BLAST of EY735930 vs. ExPASy Swiss-Prot
Match: NMD3_YEAST (60S ribosomal export protein NMD3 OS=Saccharomyces cerevisiae GN=NMD3 PE=1 SV=2) HSP 1 Score: 189.889 bits (481), Expect = 1.616e-47 Identity = 88/197 (44.67%), Postives = 128/197 (64.97%), Query Frame = 2 Query: 35 ISHCPECDCYLQPPRTWIKAQLESKELLTFCVKRLKNLNRVRLVNAEFIWTEPHSKRIKVKLKVQKEVLNGAILEQSYVVEYVQQDHMCDSCSRVQANPDQWVAAVQLRQHVTHRRTFFYLEQLILKHDAAARAIRITQMDQGIDFFFGNRSHAVKFVEFVGKVAPVRSRHDKQLVSHDPKSNISIISIHFQ*RSAP 625 IS C C+ +LQPP WI+A+LES+ELL C++RLK L VRLV+A FIWTEPHS+RI++KL VQ E + I++Q++ VEY+ C C+R + W A VQ+RQ V H+RTF +LEQLILKH+A I I++ G+DFF+ ++HAVK ++F+ V P++ + ++L+S D + S + P Sbjct: 55 ISFCRNCERFLQPPGQWIRAELESRELLAICLRRLKGLTFVRLVDASFIWTEPHSRRIRIKLTVQGEAMTNTIIQQTFEVEYIVIAMQCPDCAR-SYTTNTWRATVQIRQKVPHKRTFLFLEQLILKHNAHVDTISISEAKDGLDFFYAQKNHAVKMIDFLNAVVPIKHKKSEELISQDTHTGASTYKFSYSVEIVP 250 HSP 2 Score: 72.0182 bits (175), Expect = 4.910e-12 Identity = 29/63 (46.03%), Postives = 45/63 (71.43%), Query Frame = 1 Query: 592 YKYTFSVEISPICREDLICLPPKVAVSLGNLGPLVICMKVTNSIALLDPFTLRHCFLDGDQYW 780 YK+++SVEI PIC++DL+ LP K+A S+GN+ V+C K++N++ +DP TL+ L YW Sbjct: 240 YKFSYSVEIVPICKDDLVVLPKKLAKSMGNISQFVLCSKISNTVQFMDPTTLQTADLSPSVYW 302 The following BLAST results are available for this feature:
BLAST of EY735930 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY735930 ID=EY735930; Name=EY735930; organism=Citrus sinensis; type=EST; length=872bpback to top |