EY735926

Overview
NameEY735926
Unique NameEY735926
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY735926_ssr23 microsatellite EY735926_ssr23:23..34. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7876 contig Csv1_Contig7876:68..901. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY735926 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 3.121e-77
Identity = 147/256 (57.42%), Postives = 178/256 (69.53%), Query Frame = 2
Query:   56 QAECLKVPASSFMSSLKTTVDAIQQVVPVISNFANLFGDFRLTNAISDCLDLLDFSADELTWSISASQNPTGRHNGSGDLSSDLRTWLSAALINQETCIDGFDGTNSIVKGVVSGSLNQISSSVQELLTMVHPSPSQWXXXXXXXXXXXXXXXXXXXXXXQFPHWFKREDRKLLLXXXXXXXXXXXXXXTGNFTKIMDAVLAAEDYSMKRFVIYIKRGVYKENVEITKKKLNPMMVGDGLDASRLFGGSQXLVGGW 823
            Q +CLKV A+ F  SLK T+DA+QQV  ++S FAN FGDFRL NAISDCLDLLDFSADEL WS+SASQN  G++N +G LSSDLRTWLSAAL+NQ+TC +GF+GTNSIV+G++S  L Q++S VQELLT VHP+ +Q                       Q P W K +DRKLL               TGNFT + DAVLAA DYSM+R+VIYIKRG YKENVEI KKK N MM+GDG+DA+ +  G++  V GW
Sbjct:   45 QTQCLKVSATEFAGSLKDTIDAVQQVASILSQFANAFGDFRLANAISDCLDLLDFSADELNWSLSASQNQKGKNNSTGKLSSDLRTWLSAALVNQDTCSNGFEGTNSIVQGLISAGLGQVTSLVQELLTQVHPNSNQ------------------QGPNGQIPSWVKTKDRKLLQADGVSVDAIVAQDGTGNFTNVTDAVLAAPDYSMRRYVIYIKRGTYKENVEIKKKKWNLMMIGDGMDAT-IISGNRSFVDGW 281          
BLAST of EY735926 vs. ExPASy Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2)

HSP 1 Score: 245.358 bits (625), Expect = 3.030e-64
Identity = 131/263 (49.81%), Postives = 169/263 (64.26%), Query Frame = 2
Query:   56 QAECLKVPASSFMSSLKTTVDAIQQVVPVISNFANLFGDFRLTNAISDCLDLLDFSADELTWSISASQNPTGRHNGSGDLSSDLRTWLSAALINQETCIDGFDGTNSIVKGVVSGSLNQISSSVQELLTMVHP-------SPSQWXXXXXXXXXXXXXXXXXXXXXXQFPHWFKREDRKLLLXXXXXXXXXXXXXXTGNFTKIMDAVLAAEDYSMKRFVIYIKRGVYKENVEITKKKLNPMMVGDGLDASRLFGGSQXLVGGW 823
            Q + LKVPAS F+SS+ T V  I+QV  ++S FA+  GD RL NA+SDCLDLLDFS++ELTWS SAS+NP G+ NG+GD+ SD RTWLSAAL NQ TC++GFDGT+ +VK +V+GSL+Q+ S ++ELL +V P       S                          QFP W + +DRKLL               TGNFTKIMDA+  A DYS  RFVIYIK+G+Y ENVEI KKK N +M+GDG+D + +  G++  + GW
Sbjct:   24 QYDYLKVPASEFVSSINTIVVVIRQVSSILSQFADFSGDRRLQNAVSDCLDLLDFSSEELTWSASASENPKGKGNGTGDVGSDTRTWLSAALSNQATCMEGFDGTSGLVKSLVAGSLDQLYSMLRELLPLVQPEQKPKAVSKPGPIAKGPKAPPGRKLRDTDEDESLQFPDWVRPDDRKLLESNGRTYDVSVALDGTGNFTKIMDAIKKAPDYSSTRFVIYIKKGLYLENVEIKKKKWNIVMLGDGIDVT-VISGNRSFIDGW 285          
BLAST of EY735926 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.504e-63
Identity = 128/257 (49.81%), Postives = 167/257 (64.98%), Query Frame = 2
Query:   56 QAECLKVPASSFMSSLKTTVDAIQQVVPVISNFANLFGDFRLTNAISDCLDLLDFSADELTWSISASQNPTGRHNGSGDLSSDLRTWLSAALINQETCIDGFDGTNSIVKGVVSGSLNQISSSVQELLTMVHPSPSQWXXXXXXXXXXXXXXXXXXXXXXQFPHWFKREDRKLL-LXXXXXXXXXXXXXXTGNFTKIMDAVLAAEDYSMKRFVIYIKRGVYKENVEITKKKLNPMMVGDGLDASRLFGGSQXLVGGW 823
            Q ECL+VP   F  + KT VDAI + V ++S F    G  R++NAI DC+DLLD +A+EL+W ISASQ+P G+ N +GD+ SDLRTW+SAAL NQ+TC+DGF+GTN I+K +V+G L+++ ++V+ LLTMVH  PS+                       +FP W K  DRKLL                TGNFT I DAVLAA DYS KR+VI++KRGVY ENVEI KKK N MMVGDG+DA+ +  G++  + GW
Sbjct:   36 QMECLRVPPLEFAEAAKTVVDAITKAVAIVSKFDKKAGKSRVSNAIVDCVDLLDSAAEELSWIISASQSPNGKDNSTGDVGSDLRTWISAALSNQDTCLDGFEGTNGIIKKIVAGGLSKVGTTVRNLLTMVHSPPSK----PKPKPIKAQTMTKAHSGFSKFPSWVKPGDRKLLQTDNITVADAVVAADGTGNFTTISDAVLAAPDYSTKRYVIHVKRGVYVENVEIKKKKWNIMMVGDGIDAT-VITGNRSFIDGW 287          
BLAST of EY735926 vs. ExPASy Swiss-Prot
Match: PME22_ARATH (Putative pectinesterase/pectinesterase inhibitor 22 OS=Arabidopsis thaliana GN=PME22 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.347e-24
Identity = 77/261 (29.50%), Postives = 124/261 (47.51%), Query Frame = 2
Query:   77 PASSFMSSLKTTVDAIQQVVPVISNFANLFGDFRLTNAISDCLDLLDFSADELTWSISASQNPTGR-----HNGSGDLSS---DLRTWLSAALINQETCIDGFDGTNSIVKGVVSGSLNQIS---SSVQELLTMVHPSPSQWXXXXXXXXXXXXXXXXXXXXXXQFPHWFKREDRKLLLXXXXXXXXXXXXXXT---GNFTKIMDAVLAAEDYSMKRFVIYIKRGVYKENVEITKKKLNPMMVGDGLDASRLFGGSQXLVG 817
            P S   +++K   D  +  +  I     L    R   AI DC +L+ FS  EL WS+       G       +GS D ++   +L+TWLSAA+ NQ+TC++GF+GT    + ++ GSL Q++   S+V ++ T ++  P +                         P W    D  L++                  G +  I +A+  A ++S KR+VIY+K+GVYKEN+++ KKK N M+VGDG+  + + G    + G
Sbjct:   67 PHSVLRAAVKEAHDKAKLAMERIPTVMMLSIRSREQVAIEDCKELVGFSVTELAWSMLEMNKLHGGGGIDLDDGSHDAAAAGGNLKTWLSAAMSNQDTCLEGFEGTERKYEELIKGSLRQVTQLVSNVLDMYTQLNALPFK---------------ASRNESVIASPEWLTETDESLMMRHDPSVMHPNTVVAIDGKGKYRTINEAINEAPNHSTKRYVIYVKKGVYKENIDLKKKKTNIMLVGDGIGQTIITGDRNFMQG 312          
BLAST of EY735926 vs. ExPASy Swiss-Prot
Match: PME22_SOLLC (Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.918e-24
Identity = 75/248 (30.24%), Postives = 116/248 (46.77%), Query Frame = 2
Query:   83 SSFMSSLKTTVDAIQQVVPVISNFANLFGDFRLTNAISDCLDLLDFSADELTWSISASQNPTGRHNGSGDLSSDLRTWLSAALINQETCIDGFDGTNSIVKGVVSGS-LNQISSSVQELLTMVHPSPSQWXXXXXXXXXXXXXXXXXXXXXXQFPHWFKREDRKLL--LXXXXXXXXXXXXXXTGNFTKIMDAVLAAEDYSMKRFVIYIKRGVYKENVEITKKKLNPMMVGDGLDASRLFGGSQXLVG 817
            S  M  L   V  +   +PV+S   N   D R   A++DCL+LLD S D ++ SI+A    T   + +       ++WLS  L N  TC+D  D   S  K +++G+ L+++ S  +  L M+    +                        + P W    DRKL+                 TG +  + +AV AA D S  R+VIY+KRG+YKENVE++ +K+  M+VGDG+ A+ + G    + G
Sbjct:   84 SILMKFLVNYVHQMNNAIPVVSKMKNQINDIRQEGALTDCLELLDQSVDLVSDSIAAIDKRTHSEHANA------QSWLSGVLTNHVTCLDELD---SFTKAMINGTNLDELISRAKVALAMLASVTTP-------------NDDVLRPGLGKMPSWVSSRDRKLMESSGKDIGANAVVAKDGTGKYRTLAEAVAAAPDKSKTRYVIYVKRGIYKENVEVSSRKMKLMIVGDGMHATIITGNLNVVDG 309          
BLAST of EY735926 vs. ExPASy Swiss-Prot
Match: PME1_SOLLC (Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5)

HSP 1 Score: 107.842 bits (268), Expect = 7.549e-23
Identity = 75/248 (30.24%), Postives = 113/248 (45.56%), Query Frame = 2
Query:   83 SSFMSSLKTTVDAIQQVVPVISNFANLFGDFRLTNAISDCLDLLDFSADELTWSISASQNPTGRHNGSGDLSSDLRTWLSAALINQETCIDGFDGTNSIVKGVVSGS-LNQISSSVQELLTMVHPSPSQWXXXXXXXXXXXXXXXXXXXXXXQFPHWFKREDRKLL--LXXXXXXXXXXXXXXTGNFTKIMDAVLAAEDYSMKRFVIYIKRGVYKENVEITKKKLNPMMVGDGLDASRLFGGSQXLVG 817
            S  M  L   V  +   +PV+    N   D R   A++DCL+LLD S D  + SI+A    +   + +       ++WLS  L N  TC+D  D   S  K +++G+ L ++ S  +  L M+    +Q                       + P W    DRKL+                 TG++  + +AV AA D S  R+VIY+KRG YKENVE+   K+N M+VGDG+ A+ + G    + G
Sbjct:   80 SILMKFLVNYVHQMNNAIPVVRKMKNQINDIRQHGALTDCLELLDQSVDFASDSIAAIDKRSRSEHANA------QSWLSGVLTNHVTCLDELD---SFTKAMINGTNLEELISRAKVALAMLASLTTQ-------------DEDVFMTVLGKMPSWVSSMDRKLMESSGKDIIANAVVAQDGTGDYQTLAEAVAAAPDKSKTRYVIYVKRGTYKENVEVASNKMNLMIVGDGMYATTITGSLNVVDG 305          
BLAST of EY735926 vs. ExPASy Swiss-Prot
Match: PME21_SOLLC (Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2.1 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 2.197e-22
Identity = 72/240 (30.00%), Postives = 114/240 (47.50%), Query Frame = 2
Query:  110 TVDAIQQVVPVISNFANLFGDFRLTNAISDCLDLLDFSADELTWSISASQNPTGRHNGSGDLSSDLRTWLSAALINQETCIDGFDGTNSIVKGVVSGS-LNQISSSVQELLTMVHPSPSQWXXXXXXXXXXXXXXXXXXXXXXQFPHWFKREDRKLL--LXXXXXXXXXXXXXXTGNFTKIMDAVLAAEDYSMKRFVIYIKRGVYKENVEITKKKLNPMMVGDGLDASRLFGGSQXLVGG 820
            +V  +   +PV+    N   D R   A++DCL+LLD S D +  SI+A    +   + +       ++WLS  L N  TC+D  D   S  K +++G+ L+++ S  +  L M+    +                        + P W    DRKL+                 TG +  + +AV AA D S  R+VIY+KRG YKENVE++ +K+N M++GDG+ A+ +  GS  +V G
Sbjct:   93 SVHQMNNAIPVVRKIKNQINDIREQGALTDCLELLDLSVDLVCDSIAAIDKRSRSEHANA------QSWLSGVLTNHVTCLDELD---SFTKAMINGTNLDELISRAKVALAMLASVTTP-------------NDEVLRPGLGKMPSWVSSRDRKLMESSGKDIGANAVVAKDGTGKYRTLAEAVAAAPDKSKTRYVIYVKRGTYKENVEVSSRKMNLMIIGDGMYAT-IITGSLNVVDG 309          
BLAST of EY735926 vs. ExPASy Swiss-Prot
Match: PME3_SOLLC (Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.859e-21
Identity = 68/243 (27.98%), Postives = 111/243 (45.68%), Query Frame = 2
Query:  113 VDAIQQVVPVISNFANLFGDFRLTNAISDCLDLLDFSADELTWSISASQNPTGRHNGSGDLSSDLRTWLSAALINQETCIDGFDGTNSIVKG--VVSGSLNQISSSVQELLTMVHPSPSQWXXXXXXXXXXXXXXXXXXXXXXQFPHWFKREDRKLL--LXXXXXXXXXXXXXXTGNFTKIMDAVLAAEDYSMKRFVIYIKRGVYKENVEITKKKLNPMMVGDGLDASRLFGGSQXLVGGWHP 829
            V  +   +PV+    N   D R   A++DCL+LLD S D ++ SI+A    +   + +       ++WLS  L N  TC+D     +   K   V+   + +   ++  L ++  P+                          + P+W    DRKL+                 TG++  + +AV AA D +  R+VIY+K G+YKENV +TKKK+N M+VGDG++A+ + G    + G   P
Sbjct:   89 VHQMNNAIPVVRKIKNQINDIRQQGALTDCLELLDQSVDLVSDSIAAIDKRSRSEHANA------QSWLSGVLTNHVTCLDELTSFSLSTKNGTVLDELITRAKVALAMLASVTTPNDE-----------------VLRQGLGKMPYWVSSRDRKLMESSGKDIIANRVVAQDGTGDYQTLAEAVAAAPDKNKTRYVIYVKMGIYKENVVVTKKKMNLMIVGDGMNATIITGSLNVVDGSTFP 308          
BLAST of EY735926 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.205e-20
Identity = 69/214 (32.24%), Postives = 103/214 (48.13%), Query Frame = 2
Query:  176 RLTNAISDCLDLLDFSADELTWSISASQNPTGRHNGSGDLSSDLRTWLSAALINQETCIDGFD---GTNSIVKGVVSGSLNQISSSVQELLTMVHPSPSQWXXXXXXXXXXXXXXXXXXXXXXQFPHWFKREDRKLL--LXXXXXXXXXXXXXXTGNFTKIMDAVLAAEDYSMKRFVIYIKRGVY-KENVEITKKKLNPMMVGDGLDASRLFGG 799
            R+ +A   CL+LLD S D LT ++S+    +G  +      SD+ TWLS+A+ N +TC DGFD   G    VK  V G++  +S  V   L +                              + P+W KREDR+LL                 +G F  I +A+  A ++S +RFVIY+K G Y +EN+++ +KK N M +GDG   + + GG
Sbjct:  136 RVRSAYDSCLELLDDSVDALTRALSSVVVVSGDES-----HSDVMTWLSSAMTNHDTCTDGFDEIEGQGGEVKDQVIGAVKDLSEMVSNCLAIFAGKVKD----LSGVPVVNNRKLLGTEETEELPNWLKREDRELLGTPTSAIQADITVSKDGSGTFKTIAEAIKKAPEHSSRRFVIYVKAGRYEEENLKVGRKKTNLMFIGDGKGKTVITGG 340          
BLAST of EY735926 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 8.638e-19
Identity = 69/231 (29.87%), Postives = 106/231 (45.89%), Query Frame = 2
Query:  176 RLTNAISDCLDLLDFSADELTWSIS-----ASQNPTGRHNGSGDLSSDLRTWLSAALINQETCIDGF---DGTNSIVKGVVSGSLN---QISSSVQELLTMVHPSPSQWXXXXXXXXXXXXXXXXXXXXXXQ-----FPHWFKREDRKLLLXXXXXXXXXXXXXXTGNFTKIMDAVLAAEDYSMKRFVIYIKRGVYKENVEITKKKLNPMMVGDGLDASRLFGGSQXLVGG 820
            R   A+ DCL+ +D + DEL  ++        Q    +H      + DL+T +S+A+ NQ TC+DGF   D    + K ++ G ++     S+++  +  M     + +                            +P W    DR+LL               +G+FT +  AV AA + S KRFVI+IK GVY+ENVE+TKKK N M +GDG     +  GS+ +V G
Sbjct:  125 REVTALHDCLETIDETLDELHVAVEDLHQYPKQKSLRKH------ADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMIKNMTETDIANFELRDKSSTFTNNNNRKLKEVTGDLDSDGWPKWLSVGDRRLLQGSTIKADATVADDGSGDFTTVAAAVAAAPEKSNKRFVIHIKAGVYRENVEVTKKKTNIMFLGDG-RGKTIITGSRNVVDG 348          
The following BLAST results are available for this feature:
BLAST of EY735926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
PME_PRUPE3.121e-7757.42Pectinesterase/pectinesterase inhibitor PPE8B OS=P... [more]
PME44_ARATH3.030e-6449.81Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME32_ARATH1.504e-6349.81Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME22_ARATH2.347e-2429.50Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME22_SOLLC8.918e-2430.24Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2... [more]
PME1_SOLLC7.549e-2330.24Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9... [more]
PME21_SOLLC2.197e-2230.00Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2... [more]
PME3_SOLLC1.859e-2127.98Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 P... [more]
PME61_ARATH1.205e-2032.24Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME2_ARATH8.638e-1929.87Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-007-G09-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735926 ID=EY735926; Name=EY735926; organism=Citrus sinensis; type=EST; length=834bp
CACGCGTCCGGCGGTTTCTTTGAGCAGCAGCAGCAATGCGGGCTCGGAAT
ATTCGCAGGCCGAGTGCTTGAAAGTGCCAGCCTCCTCTTTCATGAGCTCT
TTGAAGACCACCGTTGATGCCATTCAACAGGTGGTTCCTGTTATTTCTAA
CTTTGCTAATTTGTTTGGTGATTTTCGTCTCACAAATGCTATATCAGACT
GTCTTGATCTCCTTGATTTCTCTGCTGATGAGCTCACCTGGTCCATCTCT
GCTTCCCAAAATCCCACTGGAAGGCATAACGGCAGTGGAGATCTAAGTTC
AGACTTGAGAACTTGGTTAAGTGCTGCACTGATTAATCAGGAGACATGCA
TTGATGGGTTTGATGGCACCAATAGCATTGTCAAAGGTGTGGTATCAGGT
AGCCTTAACCAAATTTCTTCGTCGGTTCAAGAACTTCTAACAATGGTGCA
TCCTTCCCCCAGCCAATGGTCCAACGAGGGTAGCAGCAGCAACAGCGGTG
GCAAAAGTCGCGGCGGAGGGGGAAAATCAAGCGGCCAATTTCCTCATTGG
TTTAAGCGTGAAGATCGGAAATTGTTGCTCGTCAATGGGGTGCAAGCTGA
TGTTGTGGTANCAGCAGATGGTACAGGGAACTTTACTAAAATAATGGATG
CCGTGTTGGCAGCAGAGGATTATAGTATGAAAAGATTCGTGATTTACATC
AAGAGGGGTGTGTATAAAGAGAATGTTGAAATTACAAAAAAGAAATTGAA
CCCCATGATGGTGGGAGATGGGCTTGATGCGTCGCGCCTATTCGGGGGAT
CGCAGATNTTGGTGGGCGGGTGGCACCCCTTGGG
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