EY735715

Overview
NameEY735715
Unique NameEY735715
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY735715_ssr270 microsatellite EY735715_ssr270:270..293. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig10453 contig Csv1_Contig10453:1..861. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY735715 vs. ExPASy Swiss-Prot
Match: ERF99_ARATH (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 6.694e-14
Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 3
Query:  699 KVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGA 821
            K + YRGVR RPWGK+AAEIRDPKKNGARVWLGTY+TPE A
Sbjct:   88 KGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDA 128          
BLAST of EY735715 vs. ExPASy Swiss-Prot
Match: ERF1_TOBAC (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.401e-13
Identity = 45/95 (47.37%), Postives = 55/95 (57.89%), Query Frame = 3
Query:  537 LNDAVDSVGWDSFXXXXXXXXXXXISEARAAAATLDMVTYHQTAGVAARDRDQAKVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGA 821
            L DA++ VGW  F            SE R       +V+  +T    A +  + +  HYRGVR RPWGK+AAEIRDP KNGARVWLGTY+T E A
Sbjct:   57 LKDALN-VGWSPFNFSAGEVK----SEQREEEI---VVSPAETTAAPAAELPRGR--HYRGVRRRPWGKFAAEIRDPAKNGARVWLGTYETDEEA 141          
BLAST of EY735715 vs. ExPASy Swiss-Prot
Match: EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 7.401e-13
Identity = 33/42 (78.57%), Postives = 36/42 (85.71%), Query Frame = 3
Query:  696 AKVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGA 821
            AK  HYRGVR RPWGK+AAEIRDP KNGARVWLGT++T E A
Sbjct:  143 AKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDA 184          
BLAST of EY735715 vs. ExPASy Swiss-Prot
Match: ERF2_TOBAC (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.666e-13
Identity = 32/38 (84.21%), Postives = 34/38 (89.47%), Query Frame = 3
Query:  708 HYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGA 821
            HYRGVR RPWGK+AAEIRDP KNGARVWLGTY+T E A
Sbjct:   98 HYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEA 135          
BLAST of EY735715 vs. ExPASy Swiss-Prot
Match: ERF2_NICSY (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.666e-13
Identity = 32/38 (84.21%), Postives = 34/38 (89.47%), Query Frame = 3
Query:  708 HYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGA 821
            HYRGVR RPWGK+AAEIRDP KNGARVWLGTY+T E A
Sbjct:  102 HYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEA 139          
BLAST of EY735715 vs. ExPASy Swiss-Prot
Match: EF101_ARATH (Ethylene-responsive transcription factor 2 OS=Arabidopsis thaliana GN=ERF2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.666e-13
Identity = 32/41 (78.05%), Postives = 35/41 (85.37%), Query Frame = 3
Query:  699 KVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGA 821
            K  HYRGVR RPWGK+AAEIRDP KNGARVWLGT++T E A
Sbjct:  113 KAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDA 153          
BLAST of EY735715 vs. ExPASy Swiss-Prot
Match: ERF1_SOLLC (Ethylene-responsive transcription factor 1 OS=Solanum lycopersicum GN=ERF1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.262e-12
Identity = 33/43 (76.74%), Postives = 36/43 (83.72%), Query Frame = 3
Query:  693 QAKVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGA 821
            Q K  HYRGVR RPWGK+AAEIRDP KNGARVWLGTY++ E A
Sbjct:  101 QPKGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYESAEEA 143          
BLAST of EY735715 vs. ExPASy Swiss-Prot
Match: EF105_ARATH (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana GN=ERF105 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.797e-12
Identity = 40/81 (49.38%), Postives = 49/81 (60.49%), Query Frame = 3
Query:  567 DSFXXXXXXXXXXXISEARAAAATLDMVTYHQTAGVAARDRDQAKVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDT 809
            D+F           +S+ +   AT+ + T   TA V  ++ DQ    HYRGVR RPWGKYAAEIRDP K G RVWLGT+DT
Sbjct:   31 DTFASTIHHCTTSTLSQRKPPLATIAVPT---TAPVV-QENDQR---HYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDT 104          
BLAST of EY735715 vs. ExPASy Swiss-Prot
Match: EF104_ARATH (Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana GN=ERF104 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.797e-12
Identity = 30/46 (65.22%), Postives = 35/46 (76.09%), Query Frame = 3
Query:  672 VAARDRDQAKVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDT 809
            V+ +   + +  HYRGVR RPWGKYAAEIRDP K G R+WLGTYDT
Sbjct:   75 VSTKTEKEEEERHYRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDT 120          
BLAST of EY735715 vs. ExPASy Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.396e-11
Identity = 33/46 (71.74%), Postives = 38/46 (82.61%), Query Frame = 3
Query:  684 DRDQAKVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGA 821
            D+DQ +  HYRGVR RPWGK+AAEIRDPKK  ARVWLGT++T E A
Sbjct:   30 DQDQPRRRHYRGVRQRPWGKWAAEIRDPKK-AARVWLGTFETAEEA 74          
The following BLAST results are available for this feature:
BLAST of EY735715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
ERF99_ARATH6.694e-1482.93Ethylene-responsive transcription factor 13 OS=Ara... [more]
ERF1_TOBAC7.401e-1347.37Ethylene-responsive transcription factor 1 OS=Nico... [more]
EF100_ARATH7.401e-1378.57Ethylene-responsive transcription factor 1A OS=Ara... [more]
ERF2_TOBAC9.666e-1384.21Ethylene-responsive transcription factor 2 OS=Nico... [more]
ERF2_NICSY9.666e-1384.21Ethylene-responsive transcription factor 2 OS=Nico... [more]
EF101_ARATH9.666e-1378.05Ethylene-responsive transcription factor 2 OS=Arab... [more]
ERF1_SOLLC1.262e-1276.74Ethylene-responsive transcription factor 1 OS=Sola... [more]
EF105_ARATH4.797e-1249.38Ethylene-responsive transcription factor ERF105 OS... [more]
EF104_ARATH4.797e-1265.22Ethylene-responsive transcription factor ERF104 OS... [more]
EF113_ARATH1.396e-1171.74Ethylene-responsive transcription factor ERF113 OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-004-A11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735715 ID=EY735715; Name=EY735715; organism=Citrus sinensis; type=EST; length=861bp
CCACGCGTCCGATCGGTTTGAAATTAAACTGAAATCGATATATTCTCACT
TCTCAGACGTGGGCTGTCTCACGTCCACTTGCGAAAAAATAAATTTTCAC
TTGTAATTTTTCAGAAATGTATTCGGAAAGTATTTCTCAAACGGATATGG
CTCTCTTGGAGTCAATCCGGCATCATCTTCTAGATGATGACTTCGAAGAC
ATAAATTCAATGATGCAACCACTACAAGTAGAAGACGTTAATTCATCAAT
ATTGCAACAGCACCAGCACCAGCAGCAGCAGCAGCAGCAGCAGATGCCTC
TAGAAAATTTTTCAGAATCGGATTTTGATCTTCTTCAAAATCTTCTCGAG
GACGTAAACACAGCCTCATCTTTTGAATCGGATTACTTAAACAATGCACC
CTCCGTGTACTCACCAACTTCGAGCTTCGGCAGTGCCGTCTTTGATTTTC
CACTACAAGTAACAGGTAATGTTGTTATTAACAATAACAACAACTACCCA
ATCCCTTCCTATGGCTGCTATGATCATCCCAAAGCCTTAAACGACGCCGT
TGACAGCGTGGGTTGGGATTCCTTTGATCATCATNCAGCTGATCAGGATG
ATCAAGCAATAAGCGAAGCCCGCGCAGCCGCCGCTACCCTTGATATGGTG
ACTTACCACCAGACGGCGGGGGTGGCAGCACGTGATCGTGATCAGGCGAA
GGTGGTGCATTACAGGGGGGTGAGGACGAGGCCATGGGGGAAATATGCGG
CTGAGATTAGAGACCCTAAGAAGAACGGGGCCCGTGTTTGGCTTGGCACT
TATGATACCCCTGAGGGCGCACCGTGGCTTAGGATAAGCCCCCTTCAAAA
TCCGTCCCGCG
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