EY735690

Overview
NameEY735690
Unique NameEY735690
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12304 contig Csv1_Contig12304:1..850. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY735690 vs. ExPASy Swiss-Prot
Match: Y3627_ARATH (VHS domain-containing protein At3g16270 OS=Arabidopsis thaliana GN=At3g16270 PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.832e-48
Identity = 113/250 (45.20%), Postives = 139/250 (55.60%), Query Frame = 1 
Query:   10 RKNADDPFADVLFHTSEGKEHVEDLFSGMTVDSKPVASGNLLAADKSGSEPFDDIFGSHTEILPKQENQKNNFNDLMAGFSINEDQLKPEGSSAGVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMNANPFPFGTMPYNIPAGMTLNPSIASQPMNYSAMGNLFAQQQ-FLAAMSNLQHIGNLNVHNSGAANLVGGNGG--SPLPDIFQPNFPTQASMPALNNSKKEDTRAFDFISDHLASARDSKK 750
            +K  DDPFADV FH +E KE  +DLFSGMTV  K  A G     D        D+FGS  ++  + ++ KN  NDLM  FSI+E+    +GSS+                                  +     P G MP+N P GM +NP+ ASQP+NY+AM +L AQQQ +L  MSN Q  GNLN   SG    +G +GG  S LPDIFQPNF  QA    +N SKKEDTRAFDFISDHL SARD+K+
Sbjct:  446 KKTDDDPFADVSFHPNEEKESADDLFSGMTVGEKSAAVGGNHVPD------LFDMFGSTAKLEAEPKDAKN-INDLMGSFSIDENNSNQKGSSSSTLPQDLFAMPSTTSHQAPENPVGGILGSQNPGFIQNTMLPGGVMPFNFPQGMMMNPAFASQPLNYAAMASLLAQQQQYLGNMSNFQQFGNLNAQGSGNVLSMGTSGGNQSALPDIFQPNFGNQAPTSTMNGSKKEDTRAFDFISDHLTSARDTKR 688
The following BLAST results are available for this feature:
BLAST of EY735690 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y3627_ARATH1.832e-4845.20VHS domain-containing protein At3g16270 OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-003-G04-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735690 ID=EY735690; Name=EY735690; organism=Citrus sinensis; type=EST; length=849bp
CCACGCGTCCGAAAAAATGCTGATGACCCCTTTGCAGATGTCTTGTTTCA
CACCAGTGAGGGTAAAGAGCATGTTGAAGATCTCTTTTCTGGGATGACTG
TTGACAGTAAGCCAGTGGCAAGTGGAAATCTTCTGGCAGCAGATAAAAGT
GGATCTGAACCATTTGATGATATTTTTGGGTCACACACTGAAATTCTGCC
AAAGCAAGAAAACCAGAAAAACAATTTTAATGATTTAATGGCCGGTTTTT
CCATTAATGAAGACCAGTTGAAGCCAGAAGGTTCCTCTGCTGGGGTGCCA
TCTGAAAGTATCTTTTCGGATTCAAGCAGTAACCCTAGCCAGCAGCTGTC
TAGTGATGCTTTGAGCAGCCTACTTGGTTCTCAATCAGCAGGGATGAATG
CCAACCCATTTCCATTCGGTACTATGCCATATAATATTCCAGCTGGCATG
ACATTAAATCCATCTATTGCATCTCAGCCAATGAATTATAGTGCCATGGG
GAATTTATTTGCCCAGCAACAATTCCTTGCTGCAATGTCTAACCTTCAAC
ATATTGGTAACCTGAATGTTCATAATTCTGGTGCCGCCAATTTGGTTGGA
GGAAATGGAGGCTCACCACTTCCAGATATATTCCAACCAAACTTTCCAAC
TCAAGCTTCCATGCCTGCCCTGAACAATTCAAAGAAAGAGGACACAAGAG
CATTCGATTTTATCTCAGACCATCTTGCATCAGCTCGTGATTCGAAGAAG
GGTGCTTAAATTTTGGTGTTTATCCTTGCTGAGGCTTTATTTATACGAGG
GCAGTAGGTCGAGGAGCAGATTTAGTCTTAGTACTGAGATGGTATCTCT
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