EY735546
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY735546 vs. ExPASy Swiss-Prot
Match: HNRPQ_HUMAN (Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens GN=SYNCRIP PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.363e-11 Identity = 44/147 (29.93%), Postives = 75/147 (51.02%), Query Frame = 1 Query: 16 SRQKMTNPNFKLGTNAPTVSWADP-RNVDSSGASQVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKPQADQKSAGGSVSEKPSLLQNY-------PPHI 432 +R+++ + K+ N TV WADP + D ++VK ++V+NL VT++ L+K F G++ +V ++ F+HF ER A+KA++ +L+G+ +E AKP DQK + + Q Y PPH+ Sbjct: 302 ARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKP-PDQKRKERKAQRQAAKNQMYDDYYYYGPPHM 439
BLAST of EY735546 vs. ExPASy Swiss-Prot
Match: HNRPQ_RAT (Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus GN=Syncrip PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.780e-11 Identity = 44/147 (29.93%), Postives = 75/147 (51.02%), Query Frame = 1 Query: 16 SRQKMTNPNFKLGTNAPTVSWADP-RNVDSSGASQVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKPQADQKSAGGSVSEKPSLLQNY-------PPHI 432 +R+++ + K+ N TV WADP + D ++VK ++V+NL VT++ L+K F G++ +V ++ F+HF ER A+KA++ +L+G+ +E AKP DQK + + Q Y PPH+ Sbjct: 212 ARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKP-PDQKRKERKAQRQAAKNQMYDDYYYYGPPHM 349
BLAST of EY735546 vs. ExPASy Swiss-Prot
Match: HNRPQ_MOUSE (Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus GN=Syncrip PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.780e-11 Identity = 44/147 (29.93%), Postives = 75/147 (51.02%), Query Frame = 1 Query: 16 SRQKMTNPNFKLGTNAPTVSWADP-RNVDSSGASQVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKPQADQKSAGGSVSEKPSLLQNY-------PPHI 432 +R+++ + K+ N TV WADP + D ++VK ++V+NL VT++ L+K F G++ +V ++ F+HF ER A+KA++ +L+G+ +E AKP DQK + + Q Y PPH+ Sbjct: 302 ARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKP-PDQKRKERKAQRQAAKNQMYDDYYYYGPPHM 439
BLAST of EY735546 vs. ExPASy Swiss-Prot
Match: HNRPR_HUMAN (Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens GN=HNRNPR PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.834e-11 Identity = 37/115 (32.17%), Postives = 64/115 (55.65%), Query Frame = 1 Query: 16 SRQKMTNPNFKLGTNAPTVSWADP-RNVDSSGASQVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKP 357 +R+++ + K+ N TV WADP D ++VK ++V+NL VT++ L+K F G++ +V ++ FVHF +R +A+KA+ E++G+ +E LAKP Sbjct: 305 ARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERV--------KKLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKP 411 The following BLAST results are available for this feature:
BLAST of EY735546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY735546 ID=EY735546; Name=EY735546; organism=Citrus sinensis; type=EST; length=848bpback to top |