EY735541

Overview
NameEY735541
Unique NameEY735541
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1092
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735541 vs. ExPASy Swiss-Prot
Match: THI4_CITSI (Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 4.147e-33
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1
Query:   73 AIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVHPELIL 285
            AIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVHPELIL
Sbjct:  275 AIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVHPELIL 345          
BLAST of EY735541 vs. ExPASy Swiss-Prot
Match: THI4_ALNGL (Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 2.275e-31
Identity = 70/93 (75.27%), Postives = 77/93 (82.80%), Query Frame = 1
Query:    7 RSTVRIPGRPRVRGTGHELCLYAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVHPELIL 285
            RS   I   P ++     +   AIVRLTRE+VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK+LG PNALDG+YVGG+HPELIL
Sbjct:  249 RSIGMIDTVPGMKALDMNVAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGLPNALDGSYVGGIHPELIL 341          
BLAST of EY735541 vs. ExPASy Swiss-Prot
Match: THI4_ARATH (Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 3.400e-27
Identity = 61/71 (85.92%), Postives = 65/71 (91.55%), Query Frame = 1
Query:   73 AIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVHPELIL 285
            AIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKA  LALK+LG PNA+DGT VG + PEL+L
Sbjct:  268 AIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALGLPNAIDGTLVGNLSPELVL 338          
BLAST of EY735541 vs. ExPASy Swiss-Prot
Match: THI41_MAIZE (Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 3.182e-25
Identity = 58/70 (82.86%), Postives = 64/70 (91.43%), Query Frame = 1
Query:   76 IVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVHPELIL 285
            IVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK+LG+PNA+DGT    +  EL++
Sbjct:  275 IVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNAVDGTMSPPLREELMI 344          
BLAST of EY735541 vs. ExPASy Swiss-Prot
Match: THI42_MAIZE (Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.209e-24
Identity = 56/59 (94.92%), Postives = 59/59 (100.00%), Query Frame = 1
Query:   76 IVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGT 252
            IVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK+LG+PNA+DGT
Sbjct:  272 IVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNAVDGT 330          
BLAST of EY735541 vs. ExPASy Swiss-Prot
Match: THI4_FUSOX (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.387e-12
Identity = 41/70 (58.57%), Postives = 49/70 (70.00%), Query Frame = 1
Query:   10 STVRIPGRPRVRGTGHELCLYAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 219
            S  RI     +RG    L   AIV+ TRE+VPG+IV GME++E+DGA RMGPTFGAM +SG KAA  ALK
Sbjct:  240 SMQRIEKLGGMRGLDMNLAEDAIVKGTREIVPGLIVGGMELSEVDGANRMGPTFGAMALSGLKAAEEALK 309          
BLAST of EY735541 vs. ExPASy Swiss-Prot
Match: THI4_UROFA (Thiazole biosynthetic enzyme, mitochondrial OS=Uromyces fabae GN=THI2 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.366e-12
Identity = 34/62 (54.84%), Postives = 48/62 (77.42%), Query Frame = 1
Query:   76 IVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVG 261
            I   TRE++PG+IV GME++E DG+ RMGPTFGAM++SG++AA +AL+SL +    +G  VG
Sbjct:  274 IANKTREILPGLIVGGMELSEFDGSARMGPTFGAMLLSGKRAAEVALQSLDRVKIEEGEVVG 335          
BLAST of EY735541 vs. ExPASy Swiss-Prot
Match: THI4_FUSSH (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.366e-12
Identity = 37/60 (61.67%), Postives = 47/60 (78.33%), Query Frame = 1
Query:   40 VRGTGHELCLYAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 219
            +RG    +   AIV+ TRE+VPG+IV GME++E+DGA RMGPTFGAM++SG KAA  ALK
Sbjct:  254 MRGLDMNVAEDAIVKGTREIVPGLIVGGMELSEVDGANRMGPTFGAMVLSGLKAAEEALK 313          
BLAST of EY735541 vs. ExPASy Swiss-Prot
Match: THI2_SCHPO (Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 5.827e-11
Identity = 36/61 (59.02%), Postives = 43/61 (70.49%), Query Frame = 1
Query:   76 IVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYV 258
            IV+ TREV PGMIV GME++E DGA RMGPTFG MM SG KAA  AL    +  A++  Y+
Sbjct:  268 IVKGTREVFPGMIVGGMELSEFDGANRMGPTFGGMMFSGIKAAQEALAIFDERKAVNEKYL 328          
The following BLAST results are available for this feature:
BLAST of EY735541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
THI4_CITSI4.147e-33100.00Thiazole biosynthetic enzyme, chloroplastic OS=Cit... [more]
THI4_ALNGL2.275e-3175.27Thiazole biosynthetic enzyme, chloroplastic OS=Aln... [more]
THI4_ARATH3.400e-2785.92Thiazole biosynthetic enzyme, chloroplastic OS=Ara... [more]
THI41_MAIZE3.182e-2582.86Thiazole biosynthetic enzyme 1-1, chloroplastic OS... [more]
THI42_MAIZE1.209e-2494.92Thiazole biosynthetic enzyme 1-2, chloroplastic OS... [more]
THI4_FUSOX1.387e-1258.57Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI4_UROFA2.366e-1254.84Thiazole biosynthetic enzyme, mitochondrial OS=Uro... [more]
THI4_FUSSH2.366e-1261.67Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI2_SCHPO5.827e-1159.02Thiazole biosynthetic enzyme, mitochondrial OS=Sch... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-090-H08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735541 ID=EY735541; Name=EY735541; organism=Citrus sinensis; type=EST; length=1092bp
GGGGAACGCAGTACGGTCCGGATTCCGGGTCGACCCCGCGTCCGAGGCAC
TGGACATGAACTCTGCCTTTATGCTATTGTGAGGCTGACCAGGGAGGTTG
TGCCTGGTATGATAGTTACCGGCATGGAAGTTGCCGAGATTGATGGTGCT
CCTCGAATGGGGCCAACATTTGGAGCAATGATGATATCGGGGCAGAAGGC
TGCGCATTTGGCGTTGAAGTCACTGGGCCAGCCGAATGCATTAGACGGTA
CATATGTGGGAGGCGTTCACCCTGAGCTGATCTTAGCTGCAGCTGATTCT
GCTGAGACTGCTGATGCTTAATTTGGTAATAACAGGCATCATCACTCATC
AGCTGTGTGCATGCAAATAAACTCTGGCAAAAAAGTAGTTGTATTTAGGT
GGTTGTGATGGATGGTTGATGCGAATAATGAGATAATGTTGTGAGGTTTT
GTGAAGGGGGTGGGTGTTTCCGGTCCATCATGGGAACCTTTAATTTTAAT
TTTCTTTCTCCCTCCTTGTAGAATTTAGAGAAAAGGTAAAGAACATAGCC
AGCACTGCAGAGAGTATCCCAGCAGTGAGGATAAAAGAGTAGCGTAATAA
TAAAGTCAAATAGGGGGGGGCCCCCTCCAAGAGGATACCCAGCTTATTAC
CCCCGGGGCTGGCGCACCCCTAACCTCTTTTTCTTAAGGGGGCCACTAAA
ATTCAATTTAGTGGGGCGCCCTTTTTAAACCCATCCGGGCGGGGGGAAAA
CCCTGGGGGTTTACCCAATTTTTATACCTTCTTTTGGACGCCATTTCCCC
CTTTTTTCCCCGCGGTGGGGTAAATATCGGAAAAAGGCCCCCCCCCAACG
TTTCCCCCCTCCCCAAAAACTGTGTCCGCGCCCCGTTAATGGGTGAGAAG
GGGGGGCGCCCGCCCTGTGAGTTGGCCGACCCATATAATAGGGCCGGGGG
GGGGGGGGGTGGAGTGAGCTCCCCACAGTTCTGGCCTGTTACACCTTTAA
AATAATTTGTTACAAGAGGTCGCTCACATAAGCCGCGGCCCGCCACTCTC
TCTTATTTTGTTCCTCTGTTTATGTTGATTCCTCTACTTCGC
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