EY735295

Overview
NameEY735295
Unique NameEY735295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1137
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY735295 vs. ExPASy Swiss-Prot
Match: RBOHC_SOLTU (Respiratory burst oxidase homolog protein C OS=Solanum tuberosum GN=RBOHC PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 1.111e-20
Identity = 66/160 (41.25%), Postives = 91/160 (56.88%), Query Frame = 3 
Query:  165 SDTEVLGNERIPYSGPLSGPLNKRVSRKSTKFN------LATESSSGSSPHDEPYVEITLDVRDDSVAVHSVKAAGGDHNNVQENP*DYFTCQRVREKANFFFGFQCW*KGLPQESGRCLKSLKRLAFPLQRTPAPRPGLNRTKSAGTLWL*RGSRFFNK 626
            SDTE++GN+R  YSGPLSGPLNKR  +KS +FN      + T + +G+  +D+ YVEITLDVR+DSVAVHSVK AGG      E+P      + + +K+          +       +  + LKRLA  L + P P    +R KSA    L +G +F +K
Sbjct:   16 SDTEIIGNDRASYSGPLSGPLNKRGGKKSARFNIPESTDIGTSAGAGAKSNDDAYVEITLDVREDSVAVHSVKTAGGAD---VEDPELALLAKGLEKKSTLGASLV---RNASSRIRQVSQELKRLA-SLNKRPIPTGRFDRNKSAAAHAL-KGLKFISK 167
The following BLAST results are available for this feature:
BLAST of EY735295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
RBOHC_SOLTU1.111e-2041.25Respiratory burst oxidase homolog protein C OS=Sol... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-093-D06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735295 ID=EY735295; Name=EY735295; organism=Citrus sinensis; type=EST; length=1137bp
CCACGCGTCCGGTTGTGACCACTACTTTCCCATAAAGAATTTTTTTTTTT
TTTTCCTAAAAATCAAAAAGATCTCATTTCTATAAGTGTTTTTTAGTTTG
ATTTTACTTGCAGAAGAAACTTGAAGACATGGGAACTGAGGATCATCACC
ACCAGCATCATCATTCGGACACAGAGGTTCTTGGCAATGAGAGGATCCCG
TACAGTGGTCCGCTAAGCGGCCCTTTGAACAAGAGAGTTAGCAGGAAGAG
CACCAAGTTTAATTTGGCGACGGAATCAAGCTCAGGTTCGTCACCTCACG
ATGAGCCTTACGTTGAGATCACACTCGACGTCCGTGACGACTCGGTGGCT
GTTCACAGCGTTAAGGCCGCTGGTGGGGATCATAATAATGTTCAGGAAAA
TCCCTGAGATTACTTTACTTGCCAAAGGGTTAGAGAAAAGGCCAACTTCT
TTTTTGGGTTCCAGTGTTGGTAAAAAGGGCTTCCGCAAGAATCAGGCAGG
TGTCTCAAGAGCCTCAAGCGCTTGGCTTTCCCTTTGCAAAGAACCCCCGC
CCCCCGGCCCGGTTTGAATAGAACAAAGTCGGCCGGCACCTTATGGCTTT
GAAGGGGCTCCAGGTTCTTTAACAAAAATTGGAGGGGGGGTGCTGGGTTG
GGGGCCTAATGGTGAAAAAACCCGATTTGTAGGAAAAAAACCCCCCCCCC
ACCAAAAGGGGGGGGCCTTGGGCCCCCCAGGCCCCCCTTTTTGGGCAAAA
AGGGCCAAAGAAAAAGGAAAAAGGGGGAACCTCCAAAAGGTTTTCCCTTT
TGTGTGGGATTTTGTTTTTGGATGGCCCCCTTTCCCCCGGAAAAACCGTA
ATTATTTTCAAGGGGGGGAAAACACCTTACCCCCTGAAGGGGAGTCCAGG
ACAAAAAAAAGAGAATTTTTGGGGGGGAATAGAAATTCTCCCCGCGTAAA
TATAAAGAGAGGTTGTGTAAATCTTCCCCCCAGAGGCCCTTCCCCAAAAT
AACTTTTTTTTTCTTTTTTGTGGAAGAAAAAGCAGAGTGGGGTGGGTAAA
AAAAAAAAATAAAAAGGGAATTCACGAGGCCCACACACATATAGACGATG
GTGGGAGGNTGTGGGCCCGGGAACCCAAAAAAAAAAA
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