EY735207

Overview
NameEY735207
Unique NameEY735207
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length946
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY735207 vs. ExPASy Swiss-Prot
Match: Y1383_MYCBO (Uncharacterized ABC transporter ATP-binding protein Mb1383 OS=Mycobacterium bovis GN=Mb1383 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.724e-14
Identity = 51/147 (34.69%), Postives = 75/147 (51.02%), Query Frame = -3 
Query:   27 VEFTRPLVGTMANANAMIAPVTVLATVLTFGLVFISLGWISAVEVLPFAIVAPGICAPLMLLSYITHDLNNAVGAAERVQALLATPVLAQVEPGSERLPKDAEVRV--ENLGYAYDPQNPVLSNISLTLKPGTVTAIVGASGSGKST 461
            V + RPL G     +    P T L  +   G + ++   +  V +LPF  +     A L+ ++Y    L   + AA  +Q  L    LA  E   E L  +A   V  +++ + Y P  PV+ ++SLTL+PGTVTA+VG SGSGKST
Sbjct:  505 VAWQRPLAGKKTLMDLATRPATFLWLIAATGTLLVATHRMDPVNLLPFMFLGTTFGARLLGIAYGLGGLRTGLLAARHLQVTLDETELAVREHPREPLDGEAPATVVFDHVTFGYRPGVPVIQDVSLTLRPGTVTALVGPSGSGKST 651
[Close]
BLAST of EY735207 vs. ExPASy Swiss-Prot
Match: Y1348_MYCTU (Uncharacterized ABC transporter ATP-binding protein Rv1348/MT1390 OS=Mycobacterium tuberculosis GN=Rv1348 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.724e-14
Identity = 51/147 (34.69%), Postives = 75/147 (51.02%), Query Frame = -3 
Query:   27 VEFTRPLVGTMANANAMIAPVTVLATVLTFGLVFISLGWISAVEVLPFAIVAPGICAPLMLLSYITHDLNNAVGAAERVQALLATPVLAQVEPGSERLPKDAEVRV--ENLGYAYDPQNPVLSNISLTLKPGTVTAIVGASGSGKST 461
            V + RPL G     +    P T L  +   G + ++   +  V +LPF  +     A L+ ++Y    L   + AA  +Q  L    LA  E   E L  +A   V  +++ + Y P  PV+ ++SLTL+PGTVTA+VG SGSGKST
Sbjct:  505 VAWQRPLAGKKTLMDLATRPATFLWLIAATGTLLVATHRMDPVNLLPFMFLGTTFGARLLGIAYGLGGLRTGLLAARHLQVTLDETELAVREHPREPLDGEAPATVVFDHVTFGYRPGVPVIQDVSLTLRPGTVTALVGPSGSGKST 651
The following BLAST results are available for this feature:
BLAST of EY735207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
Y1383_MYCBO7.724e-1434.69Uncharacterized ABC transporter ATP-binding protei... [more]
Y1348_MYCTU7.724e-1434.69Uncharacterized ABC transporter ATP-binding protei... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-110-A01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735207 ID=EY735207; Name=EY735207; organism=Citrus sinensis; type=EST; length=946bp
GGACTGCAGTACGGTCCGGATTCCCGGGTCGACTTGCCCGAGCCCGAAGC
GCCGACGATGGCGGTGACGGTGCCGGGCTTGAGGGTCAAGCTGATATTCG
ACAGTACCGGGTTCTGCGGGTCGTAGGCGTACCCGAGGTTTTCCACGCGC
ACCTCGGCGTCCTTGGGCAGCCGCTCGGAACCCGGTTCCACCTGTGCCAG
CACCGGTGTCGCCAGCAGTGCCTGTACACGCTCGGCGGCGCCAACGGCGT
TGTTCAGGTCGTGAGTGATGTAACTCAGCAGCATCAGCGGCGCACAAATA
CCCGGCGCGACAATGGCGAACGGCAGCACCTCTACGGCGCTGATCCAGCC
CAGGCTGATAAACACCAGGCCGAACGTCAGCACCGTTGCCAGCACCGTCA
CCGGGGCGATCATTGCATTGGCGTTGGCCATCGTCCCCACCAGCGGCCGG
GTGAATTCAACGAAAGCTTTGCTGAAAATCATCCACCGCTTTGCGGTAGC
TTGCGTGGGCCTTGCCAATGGCACCCAAGGCCTTGACCACCGGAAATGCC
CTTGAACAAATCGAGAGACTTGCGTATTTGGCCCGGTCAAGGCCATCAAA
ACAGGCCTGCCTCGGTAGCGGGGAGTCTAGAACGAAAGAAAACTTAACGC
AAGGCGTGCCAGCGCCCCACCAAAGGCTCCTCCCTTTGGGTACGCTGAGG
TGCCGCAGAACCCGGGACAGCCGTCGTTACACCGGACGAGGGTGTGATAC
AATCCCTATGGGACACCCTGAATCTCTGCCGCCGTTGGTATTAAGCTTAC
CCAATGCAGGGCCGGCGGTTAAGGCTCAACGAGAAGGGAAGAATGCGTGC
GCATACGACAATTTGGAGTTAAGTGGAGGTTGGAAGATACTTTGTTTGTG
CGCCGCATGGGGCGAATCGCAGGTCGCTCGGGGTTCCGAGGAAATG
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