EY735204

Overview
NameEY735204
Unique NameEY735204
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_OCHA4 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=clpX PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.397e-35
Identity = 99/231 (42.86%), Postives = 136/231 (58.87%), Query Frame = 1
Query:    1 AADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLL------ESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTIL 666
            AAD++   AQRGIVYIDE  KI  K+++P+  RDVSGEGVQQALLK++EGTV +VP    G RKHP+ + + +DT +ILFICGGAF GL+K IS R + +SIGFGA VR+    R G +   L    LL      E  GR                       ++ L+ D LVQ+LT+P NAL KQY+++F M +V+ +F+   L     K   +K    G ++ ++K +L
Sbjct:  169 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVP--PQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVRSVDERRIGDVFRELEPEDLLKFGLIPEFVGR-----------------LPVIATLEDLDVDALVQILTEPKNALVKQYQRLFDMESVELSFHDDALRAIANKAVERKTGARGLRSIMEKILL 380          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_MESSB (ATP-dependent Clp protease ATP-binding subunit clpX OS=Mesorhizobium sp. (strain BNC1) GN=clpX PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.397e-35
Identity = 98/231 (42.42%), Postives = 136/231 (58.87%), Query Frame = 1
Query:    1 AADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLL------ESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTIL 666
            +AD++   AQRGIVYIDE  KI  K+++P+  RDVSGEGVQQALLK++EGTV +VP    G RKHP+ + + +DT  ILFICGGAF GLEK IS+R + +SIGFGA V +  + R G L   +    LL      E  GR                       ++ L+E+ LVQ+LT+P NAL KQY+++F M NV+  F+   L    +K   +K    G ++ ++  +L
Sbjct:  169 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVP--PQGGRKHPQQEFLQVDTSSILFICGGAFAGLEKIISDRGKKTSIGFGASVSSPEDRRAGELLRQVEPEDLLKFGLIPEFVGR-----------------LPILATLEDLDEEALVQILTEPKNALVKQYQRLFEMENVELTFHENALRAIARKAIERKTGARGLRSIMEAILL 380          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_BRUO2 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=clpX PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.795e-35
Identity = 98/231 (42.42%), Postives = 135/231 (58.44%), Query Frame = 1
Query:    1 AADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLL------ESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTIL 666
            AAD++   AQRGIVYIDE  KI  K+++P+  RDVSGEGVQQALLK++EGTV +VP    G RKHP+ + + +DT +ILFICGGAF GL++ IS R + +SIGFGA V++    R G +   L    LL      E  GR                       ++ L+ D LVQ+LT+P NAL KQY+++F M NV+  F+   L     K   +K    G ++ ++K +L
Sbjct:  169 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVP--PQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKTSIGFGATVKSVDERRIGEVFKELEPEDLLKFGLIPEFVGR-----------------LPVIATLEDLDVDALVQILTEPKNALVKQYQRLFDMENVELVFHDDALRAIANKAVERKTGARGLRSIMEKILL 380          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_BRUME (ATP-dependent Clp protease ATP-binding subunit clpX OS=Brucella melitensis GN=clpX PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.795e-35
Identity = 98/231 (42.42%), Postives = 135/231 (58.44%), Query Frame = 1
Query:    1 AADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLL------ESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTIL 666
            AAD++   AQRGIVYIDE  KI  K+++P+  RDVSGEGVQQALLK++EGTV +VP    G RKHP+ + + +DT +ILFICGGAF GL++ IS R + +SIGFGA V++    R G +   L    LL      E  GR                       ++ L+ D LVQ+LT+P NAL KQY+++F M NV+  F+   L     K   +K    G ++ ++K +L
Sbjct:  169 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVP--PQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKTSIGFGATVKSVDERRIGEVFKELEPEDLLKFGLIPEFVGR-----------------LPVIATLEDLDVDALVQILTEPKNALVKQYQRLFDMENVELVFHDDALRAIANKAVERKTGARGLRSIMEKILL 380          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_BRUMB (ATP-dependent Clp protease ATP-binding subunit clpX OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=clpX PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.795e-35
Identity = 98/231 (42.42%), Postives = 135/231 (58.44%), Query Frame = 1
Query:    1 AADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLL------ESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTIL 666
            AAD++   AQRGIVYIDE  KI  K+++P+  RDVSGEGVQQALLK++EGTV +VP    G RKHP+ + + +DT +ILFICGGAF GL++ IS R + +SIGFGA V++    R G +   L    LL      E  GR                       ++ L+ D LVQ+LT+P NAL KQY+++F M NV+  F+   L     K   +K    G ++ ++K +L
Sbjct:  169 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVP--PQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKTSIGFGATVKSVDERRIGEVFKELEPEDLLKFGLIPEFVGR-----------------LPVIATLEDLDVDALVQILTEPKNALVKQYQRLFDMENVELVFHDDALRAIANKAVERKTGARGLRSIMEKILL 380          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_BRUAB (ATP-dependent Clp protease ATP-binding subunit clpX OS=Brucella abortus GN=clpX PE=3 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 5.795e-35
Identity = 98/231 (42.42%), Postives = 135/231 (58.44%), Query Frame = 1
Query:    1 AADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLL------ESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTIL 666
            AAD++   AQRGIVYIDE  KI  K+++P+  RDVSGEGVQQALLK++EGTV +VP    G RKHP+ + + +DT +ILFICGGAF GL++ IS R + +SIGFGA V++    R G +   L    LL      E  GR                       ++ L+ D LVQ+LT+P NAL KQY+++F M NV+  F+   L     K   +K    G ++ ++K +L
Sbjct:  169 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVP--PQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKTSIGFGATVKSVDERRIGEVFKELEPEDLLKFGLIPEFVGR-----------------LPVIATLEDLDVDALVQILTEPKNALVKQYQRLFDMENVELVFHDDALRAIANKAVERKTGARGLRSIMEKILL 380          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_BRUA2 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Brucella abortus (strain 2308) GN=clpX PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.795e-35
Identity = 98/231 (42.42%), Postives = 135/231 (58.44%), Query Frame = 1
Query:    1 AADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLL------ESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTIL 666
            AAD++   AQRGIVYIDE  KI  K+++P+  RDVSGEGVQQALLK++EGTV +VP    G RKHP+ + + +DT +ILFICGGAF GL++ IS R + +SIGFGA V++    R G +   L    LL      E  GR                       ++ L+ D LVQ+LT+P NAL KQY+++F M NV+  F+   L     K   +K    G ++ ++K +L
Sbjct:  169 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVP--PQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKTSIGFGATVKSVDERRIGEVFKELEPEDLLKFGLIPEFVGR-----------------LPVIATLEDLDVDALVQILTEPKNALVKQYQRLFDMENVELVFHDDALRAIANKAVERKTGARGLRSIMEKILL 380          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_BRUA1 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Brucella abortus (strain S19) GN=clpX PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.795e-35
Identity = 98/231 (42.42%), Postives = 135/231 (58.44%), Query Frame = 1
Query:    1 AADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLL------ESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTIL 666
            AAD++   AQRGIVYIDE  KI  K+++P+  RDVSGEGVQQALLK++EGTV +VP    G RKHP+ + + +DT +ILFICGGAF GL++ IS R + +SIGFGA V++    R G +   L    LL      E  GR                       ++ L+ D LVQ+LT+P NAL KQY+++F M NV+  F+   L     K   +K    G ++ ++K +L
Sbjct:  169 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVP--PQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKTSIGFGATVKSVDERRIGEVFKELEPEDLLKFGLIPEFVGR-----------------LPVIATLEDLDVDALVQILTEPKNALVKQYQRLFDMENVELVFHDDALRAIANKAVERKTGARGLRSIMEKILL 380          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_RHIEC (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=clpX PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 7.568e-35
Identity = 97/231 (41.99%), Postives = 138/231 (59.74%), Query Frame = 1
Query:    1 AADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLL------ESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTIL 666
            AAD++   AQRGIVYIDE  KI  K+++P+  RDVSGEGVQQALLK++EGTV +VP    G RKHP+ + + +DT +ILFICGGAF GL+K IS R + +SIGFGA V+A  + R G +   L    L+      E  GR                       ++ L+ED L+Q+L++P NAL KQY+++F M +V+  F+   L    +K   +K    G ++ ++K +L
Sbjct:  170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVP--PQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAQDDRRVGEVLRELEPEDLVKFGLIPEFIGR-----------------LPVLATLEDLDEDALIQILSEPKNALIKQYQRLFEMEDVELTFHEDALREIARKAIVRKTGARGLRSIMEKILL 381          
BLAST of EY735204 vs. ExPASy Swiss-Prot
Match: CLPX_RHIE6 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhizobium etli (strain CIAT 652) GN=clpX PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 7.568e-35
Identity = 97/231 (41.99%), Postives = 138/231 (59.74%), Query Frame = 1
Query:    1 AADFDPFSAQRGIVYIDEAYKIV-KAESPNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLL------ESSGR*W*SCNIWPHS*IHWTDSDFNELVQPLNEDQLVQVLTDPINALGKQYKKMFTMINVQTAFY**CLAIGCQKKHGKKHWGSGAKNPIKKTIL 666
            AAD++   AQRGIVYIDE  KI  K+++P+  RDVSGEGVQQALLK++EGTV +VP    G RKHP+ + + +DT +ILFICGGAF GL+K IS R + +SIGFGA V+A  + R G +   L    L+      E  GR                       ++ L+ED L+Q+L++P NAL KQY+++F M +V+  F+   L    +K   +K    G ++ ++K +L
Sbjct:  170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVP--PQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAQDDRRVGEVLRELEPEDLVKFGLIPEFIGR-----------------LPVLATLEDLDEDALIQILSEPKNALIKQYQRLFEMEDVELTFHEDALREIARKAIVRKTGARGLRSIMEKILL 381          
The following BLAST results are available for this feature:
BLAST of EY735204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPX_OCHA43.397e-3542.86ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_MESSB3.397e-3542.42ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_BRUO25.795e-3542.42ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_BRUME5.795e-3542.42ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_BRUMB5.795e-3542.42ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_BRUAB5.795e-3542.42ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_BRUA25.795e-3542.42ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_BRUA15.795e-3542.42ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_RHIEC7.568e-3541.99ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_RHIE67.568e-3541.99ATP-dependent Clp protease ATP-binding subunit clp... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-102-H01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735204 ID=EY735204; Name=EY735204; organism=Citrus sinensis; type=EST; length=770bp
GCTGCTGATTTCGACCCCTTTTCAGCTCAGAGAGGGATCGTCTACATTGA
TGAAGCTTATAAGATAGTGAAGGCTGAGAGTCCAAACAATGGCAGAGATG
TATCGGGCGAGGGAGTCCAACAGGCATTACTGAAAATGCTAGAAGGAACT
GTAGTAAATGTTCCTATACCTGATAACGGACCTCGGAAGCATCCTCGTGG
TGATAACATTCCAATTGATACGAAAGATATCCTTTTCATATGTGGTGGTG
CCTTTGTTGGTTTGGAGAAGACAATTTCAGAGAGACGGCAAGATTCTTCT
ATTGGCTTTGGAGCACCAGTCCGTGCCAACATGAGAACTGGTGGATTGAC
TGATGCGCTTGTGACGTCATCATTGTTGGAATCATCAGGTAGATAGTGGT
GATCTTGTAACATATGGCCTCATTCCTGAATTCATTGGACGGATTCCGAT
TTTAATGAGCTTGTCCAGCCTTTAAATGAGGATCAACTTGTTCAGGTTCT
CACGGATCCCATAAATGCTCTTGGAAAACAGTACAAAAAGATGTTCACCA
TGATTAATGTCCAAACTGCCTTTTACTGATGATGCCTTGCGATTGGTTGC
CAAAAAAAGCATGGCAAAAAACACTGGGGCTCCGGGGCCAAGAACCCTAT
TAAAAAAACAATCCTCACAAAACGCGCATGGTTGAAAATTCCCGCAAAAC
CAAACATGGCACTTCTAGCTCGTAATATGCCTATTTGGTACAAATAAGGA
GGCGCTTATGGCTCATATTG
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