EY734861

Overview
NameEY734861
Unique NameEY734861
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length490
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY734861 vs. ExPASy Swiss-Prot
Match: RECG_HAEIN (ATP-dependent DNA helicase recG OS=Haemophilus influenzae GN=recG PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 9.536e-18
Identity = 45/72 (62.50%), Postives = 55/72 (76.39%), Query Frame = 3
Query:    3 ALEAGYQVALMAPTEILAEQHFITFKRWLEPLGLEVAWLAGKLKGKNRVAALEQITAGA-PMVVGTKEKYRE 215
            A++ G QVALMAPTEILAEQH   F+RW +P G+EV WLAGK+KGK+R A LE+I  GA  MVVGT   ++E
Sbjct:  313 AIDNGKQVALMAPTEILAEQHANNFRRWFKPFGIEVGWLAGKVKGKSRQAELEKIKTGAVQMVVGTHALFQE 384          
BLAST of EY734861 vs. ExPASy Swiss-Prot
Match: RECG_PASMU (ATP-dependent DNA helicase recG OS=Pasteurella multocida GN=recG PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.349e-16
Identity = 43/72 (59.72%), Postives = 52/72 (72.22%), Query Frame = 3
Query:    3 ALEAGYQVALMAPTEILAEQHFITFKRWLEPLGLEVAWLAGKLKGKNRVAALEQITAG-APMVVGTKEKYRE 215
            A++ G QVALMAPTEILAEQH   F+RW E LG+EV WLAGK+KGK R   LE+I  G   MVVGT   +++
Sbjct:  313 AIDNGKQVALMAPTEILAEQHATNFRRWFESLGIEVGWLAGKVKGKARQTELEKIRTGQVQMVVGTHALFQD 384          
BLAST of EY734861 vs. ExPASy Swiss-Prot
Match: RECG_ECO57 (ATP-dependent DNA helicase recG OS=Escherichia coli O157:H7 GN=recG PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.988e-15
Identity = 41/72 (56.94%), Postives = 51/72 (70.83%), Query Frame = 3
Query:    3 ALEAGYQVALMAPTEILAEQHFITFKRWLEPLGLEVAWLAGKLKGKNRVAALEQITAG-APMVVGTKEKYRE 215
            A+  G QVALMAPTE+LAEQH   F+ W EPLG+EV WLAGK KGK R++  E I +G   M+VGT   ++E
Sbjct:  313 AIAHGKQVALMAPTELLAEQHANNFRNWFEPLGIEVGWLAGKQKGKARLSQQEAIASGQVQMIVGTHAIFQE 384          
BLAST of EY734861 vs. ExPASy Swiss-Prot
Match: RECG_ECOLI (ATP-dependent DNA helicase recG OS=Escherichia coli (strain K12) GN=recG PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.429e-15
Identity = 41/72 (56.94%), Postives = 50/72 (69.44%), Query Frame = 3
Query:    3 ALEAGYQVALMAPTEILAEQHFITFKRWLEPLGLEVAWLAGKLKGKNRVAALEQITAG-APMVVGTKEKYRE 215
            A+  G QVALMAPTE+LAEQH   F+ W  PLG+EV WLAGK KGK R+A  E I +G   M+VGT   ++E
Sbjct:  313 AIAHGKQVALMAPTELLAEQHANNFRNWFAPLGIEVGWLAGKQKGKARLAQQEAIASGQVQMIVGTHAIFQE 384          
BLAST of EY734861 vs. ExPASy Swiss-Prot
Match: RECG_THIFE (ATP-dependent DNA helicase recG OS=Thiobacillus ferrooxidans GN=recG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.146e-13
Identity = 38/72 (52.78%), Postives = 50/72 (69.44%), Query Frame = 3
Query:    3 ALEAGYQVALMAPTEILAEQHFITFKRWLEPLGLEVAWLAGKLKGKNRVAALEQITAGA-PMVVGTKEKYRE 215
            ALEAGYQVA+MAPTEILAEQ    F++WLEPLGLEV +L G    + R    E +  G+  +V+GT+  ++E
Sbjct:  330 ALEAGYQVAMMAPTEILAEQLHARFQQWLEPLGLEVGYLVGSRSPRARRETAETLAGGSLRLVIGTQSLFQE 401          
The following BLAST results are available for this feature:
BLAST of EY734861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RECG_HAEIN9.536e-1862.50ATP-dependent DNA helicase recG OS=Haemophilus inf... [more]
RECG_PASMU2.349e-1659.72ATP-dependent DNA helicase recG OS=Pasteurella mul... [more]
RECG_ECO571.988e-1556.94ATP-dependent DNA helicase recG OS=Escherichia col... [more]
RECG_ECOLI4.429e-1556.94ATP-dependent DNA helicase recG OS=Escherichia col... [more]
RECG_THIFE4.146e-1352.78ATP-dependent DNA helicase recG OS=Thiobacillus fe... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-099-A08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY734861 ID=EY734861; Name=EY734861; organism=Citrus sinensis; type=EST; length=490bp
AGGCCCTCGAAGCCGGTTATCAAGTGGCGCTGATGGCGCCCACCGAGATT
CTCGCCGAACAGCACTTCATCACGTTCAAGCGCTGGCTCGAACCACTGGG
CCTGGAAGTCGCGTGGCTGGCCGGCAAGCTCAAGGGTAAAAACCGTGTAG
CCGCCCTGGAACAGATCACCGCTGGCGCCCCGATGGTGGTGGGCACAAAA
GAGAAGTACCGAGAGAAGGGAAGGTCAACAAGCGGGACGCGCCAGAGAAG
CAACCAACGAACCCGGTCGCGACCGCGGCCACCCACAAGAAAACCAGGAG
AAGAGGAAAGGGCCAACCACACCGAGGCAACAACCGCCGCGCCAACGAAA
AAAGAAAACAGCCAAAAACAAAAAAAAAAAGAGGGAGAACAGGGGGGAGG
AAGTAAGGAGCAAAGAGAACAACAAAAGATACAACAGGAGAAGGGGGGCG
CGCCCGCACGCCGAGAGAGGAGGGAGGGGAGGGGGAAAAG
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