EY756593

Overview
NameEY756593
Unique NameEY756593
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length508
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY756593 vs. ExPASy Swiss-Prot
Match: H2B1_MEDTR (Probable histone H2B.1 OS=Medicago truncatula PE=3 SV=3)

HSP 1 Score: 150.214 bits (378), Expect = 5.037e-36
Identity = 77/78 (98.72%), Postives = 78/78 (100.00%), Query Frame = 2 
Query:   11 EVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 244
            +VLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:   67 KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 144
[Close]
BLAST of EY756593 vs. ExPASy Swiss-Prot
Match: H2B3_MEDTR (Probable histone H2B.3 OS=Medicago truncatula PE=3 SV=3)

HSP 1 Score: 149.828 bits (377), Expect = 6.579e-36
Identity = 76/78 (97.44%), Postives = 78/78 (100.00%), Query Frame = 2 
Query:   11 EVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 244
            +VLKQVHPDIG+SSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:   57 KVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 134
[Close]
BLAST of EY756593 vs. ExPASy Swiss-Prot
Match: H2B_GOSHI (Histone H2B OS=Gossypium hirsutum GN=HIS2B PE=2 SV=3)

HSP 1 Score: 149.058 bits (375), Expect = 1.122e-35
Identity = 76/78 (97.44%), Postives = 78/78 (100.00%), Query Frame = 2 
Query:   11 EVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 244
            +VLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:   66 KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 143
[Close]
BLAST of EY756593 vs. ExPASy Swiss-Prot
Match: H2B_CAPAN (Histone H2B OS=Capsicum annuum GN=HIS2B PE=2 SV=3)

HSP 1 Score: 149.058 bits (375), Expect = 1.122e-35
Identity = 76/78 (97.44%), Postives = 78/78 (100.00%), Query Frame = 2 
Query:   11 EVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 244
            +VLKQVHPDIGISSK+MGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:   64 KVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 141
[Close]
BLAST of EY756593 vs. ExPASy Swiss-Prot
Match: H2B3_SOLLC (Histone H2B.3 (Fragment) OS=Solanum lycopersicum GN=H2B-3 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.122e-35
Identity = 76/78 (97.44%), Postives = 78/78 (100.00%), Query Frame = 2 
Query:   11 EVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 244
            +VLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:   56 KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 133
[Close]
BLAST of EY756593 vs. ExPASy Swiss-Prot
Match: H2B1_ARATH (Histone H2B.1 OS=Arabidopsis thaliana GN=At1g07790 PE=1 SV=3)

HSP 1 Score: 149.058 bits (375), Expect = 1.122e-35
Identity = 76/78 (97.44%), Postives = 78/78 (100.00%), Query Frame = 2 
Query:   11 EVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 244
            +VLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:   67 KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 144
[Close]
BLAST of EY756593 vs. ExPASy Swiss-Prot
Match: H2B9_ARATH (Histone H2B.9 OS=Arabidopsis thaliana GN=At5g02570 PE=1 SV=3)

HSP 1 Score: 148.673 bits (374), Expect = 1.466e-35
Identity = 76/78 (97.44%), Postives = 77/78 (98.72%), Query Frame = 2 
Query:   11 EVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 244
            +VLKQVHPDIGIS KAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:   51 KVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 128
[Close]
BLAST of EY756593 vs. ExPASy Swiss-Prot
Match: H2B3_ARATH (Histone H2B.3 OS=Arabidopsis thaliana GN=At2g28720 PE=1 SV=3)

HSP 1 Score: 147.902 bits (372), Expect = 2.500e-35
Identity = 75/78 (96.15%), Postives = 78/78 (100.00%), Query Frame = 2 
Query:   11 EVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 244
            +VLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:   70 KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 147
[Close]
BLAST of EY756593 vs. ExPASy Swiss-Prot
Match: H2B11_ARATH (Histone H2B.11 OS=Arabidopsis thaliana GN=At5g59910 PE=1 SV=5)

HSP 1 Score: 147.902 bits (372), Expect = 2.500e-35
Identity = 75/78 (96.15%), Postives = 78/78 (100.00%), Query Frame = 2 
Query:   11 EVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 244
            +VLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:   69 KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 146
[Close]
BLAST of EY756593 vs. ExPASy Swiss-Prot
Match: H2B8_ARATH (Histone H2B.8 OS=Arabidopsis thaliana GN=At3g53650 PE=1 SV=3)

HSP 1 Score: 147.517 bits (371), Expect = 3.265e-35
Identity = 75/78 (96.15%), Postives = 77/78 (98.72%), Query Frame = 2 
Query:   11 EVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 244
            +VLKQVHPDIGIS KAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGEL+KHAVSEGTKAVTK
Sbjct:   57 KVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELSKHAVSEGTKAVTK 134
The following BLAST results are available for this feature:
BLAST of EY756593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 204
Match NameE-valueIdentityDescription
H2B1_MEDTR5.037e-3698.72Probable histone H2B.1 OS=Medicago truncatula PE=3... [more]
H2B3_MEDTR6.579e-3697.44Probable histone H2B.3 OS=Medicago truncatula PE=3... [more]
H2B_GOSHI1.122e-3597.44Histone H2B OS=Gossypium hirsutum GN=HIS2B PE=2 SV... [more]
H2B_CAPAN1.122e-3597.44Histone H2B OS=Capsicum annuum GN=HIS2B PE=2 SV=3[more]
H2B3_SOLLC1.122e-3597.44Histone H2B.3 (Fragment) OS=Solanum lycopersicum G... [more]
H2B1_ARATH1.122e-3597.44Histone H2B.1 OS=Arabidopsis thaliana GN=At1g07790... [more]
H2B9_ARATH1.466e-3597.44Histone H2B.9 OS=Arabidopsis thaliana GN=At5g02570... [more]
H2B3_ARATH2.500e-3596.15Histone H2B.3 OS=Arabidopsis thaliana GN=At2g28720... [more]
H2B11_ARATH2.500e-3596.15Histone H2B.11 OS=Arabidopsis thaliana GN=At5g5991... [more]
H2B8_ARATH3.265e-3596.15Histone H2B.8 OS=Arabidopsis thaliana GN=At3g53650... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-D04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756593 ID=EY756593; Name=EY756593; organism=Citrus sinensis; type=EST; length=508bp
CCACGCGTCCGAGGTGCTGAAGCAGGTGCATCCTGATATAGGAATCTCCA
GCAAGGCCATGGGTATCATGAACAGCTTTATCAACGATATCTTCGAGAAA
TTGGCTCAGGAGTCGTCTCGTCTCGCGAGATACAACAAGAAGCCCACTAT
CACTTCTCGTGAGATCCAGACTGCTGTTAGACTTGTCTTGCCCGGTGAGC
TTGCCAAGCATGCCGTTTCTGAAGGCACCAAGGCTGTCACTAAGTTTACT
AGCTCTTAATGAACCTATAGCTTCAATAATTCAATTAGTATCTTCTCTTT
CTAGCTTGGGCTCTGCAATTTTTAAGGTCCTGTTTCTTTTATTTTCCTTT
TGGTTGTAGATTTTCTCTTTTGTTTACTTTTTGTATCTACCCTACCCAAC
AACCTAATCGAAGTTCTTTTTGCTCNNNNNNAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAANGG
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