EY756580
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY756580 vs. ExPASy Swiss-Prot
Match: PSBW_SPIOL (Photosystem II reaction center W protein, chloroplastic OS=Spinacia oleracea GN=psbW PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.830e-17 Identity = 52/124 (41.94%), Postives = 68/124 (54.84%), Query Frame = 1 Query: 28 ASISSTNFPALLPRSGFVPKGLT--HASPVYGMPAMATTRGRVRCSLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDERMTTEGTGLPFGLSNNTLGWILFGVFGLIWALYFIY 393 A+I++++ +L+ R+ V +SP+ G+P+M T R +V CS+E VDERM+TEGTGLPFGLSNN LGWILFGVFGLIWALYF+Y Sbjct: 2 ATITASSSASLVARASLVHNSRVGVSSSPILGLPSM-TKRSKVTCSIENKPSTTETTTTTNKSMGASLLAAAAAATISNPAMAL-VDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVY 123
BLAST of EY756580 vs. ExPASy Swiss-Prot
Match: PSBW_ARATH (Photosystem II reaction center W protein, chloroplastic OS=Arabidopsis thaliana GN=PSBW PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 9.082e-17 Identity = 52/123 (42.28%), Postives = 62/123 (50.41%), Query Frame = 1 Query: 28 ASISSTNFPALLPRSGFVPKGLTHASPVYGMPAMATTRGRVRCSLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDERMTTEGTGLPFGLSNNTLGWILFGVFGLIWALYFIYT 396 AS S PALL + + ++PV G+P M +G VRCS+E VDERM+TEGTGLPFGLSNN LGWILFGVFGLIW +F+YT Sbjct: 8 ASTVSAARPALL-----LKPTVAISAPVLGLPPMGKKKGGVRCSMETKQGNVSVMGAGVSAAATAALTAVMSNPAMAL-----VDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFFFVYT 120
BLAST of EY756580 vs. ExPASy Swiss-Prot
Match: PSBW_ORYSJ (Photosystem II reaction center W protein, chloroplastic OS=Oryza sativa subsp. japonica GN=PSBW PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.357e-12 Identity = 33/40 (82.50%), Postives = 35/40 (87.50%), Query Frame = 1 Query: 277 VDERMTTEGTGLPFGLSNNTLGWILFGVFGLIWALYFIYT 396 VDERM+TEGTGL GLSNN LGWIL GVFGLIW+LY IYT Sbjct: 71 VDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIYT 110 The following BLAST results are available for this feature:
BLAST of EY756580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY756580 ID=EY756580; Name=EY756580; organism=Citrus sinensis; type=EST; length=571bpback to top |