EY756564
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY756564 vs. ExPASy Swiss-Prot
Match: PRP39_XENLA (Pre-mRNA-processing factor 39 OS=Xenopus laevis GN=prpf39 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.614e-16 Identity = 77/257 (29.96%), Postives = 130/257 (50.58%), Query Frame = 3 Query: 12 ACANYPEYWIRYVLCMEASGSMDLAHNALARATHVFVKRLPEIHLFAARFKEQNGDIDGARAAYQLVHTETSPGLLEAIIKHANMERRLGNLEDAFSLYEQAIAIEKGKEHSQTLPMLYA-QYSRFLHLVSRNAEKARQILVDSL----DHVQLSKPLLEALIHFESIQSSPKQIDFLEQLVEKFLMSNSDSPSTANAAEREELSCVFLEFLGLFG-DAQLIKKAEDRHARLFLPHRSTSELRKRHAEDFLASERAK 764 ACA Y E+WI+Y ME + S++ + RA HV + + P +HL A F+EQ G+++ AR + + T GL ++ N+ERR GN+++A L E+ A+ K K S++ YA + +R L V N KAR++L +++ ++ +L LLE + + Q+ + ++ ++ S + A R + S +EFL FG D + + H +L L H+ ++ KR AE+ L AK Sbjct: 353 ACACYEEFWIKYAKYME-NHSVEGVRHVYNRACHVHLAKKPMVHLLWAAFEEQQGNLEEARRILKNIETAIE-GLAMVRLRRVNLERRHGNVKEAEHLLEE--AMNKTKTSSES--SFYAIKLARHLFKVQANVVKARKVLSNAIQKDKENTKLYLNLLEMEYNCDIKQNEENILAAFDKAIK----------SPMSIAMRVKFSQRKVEFLEDFGSDVNKLLDTYNEHQKL-LKHQ---DIVKRKAENGLEQPEAK 589
BLAST of EY756564 vs. ExPASy Swiss-Prot
Match: PRP39_DANRE (Pre-mRNA-processing factor 39 OS=Danio rerio GN=prpf39 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 9.945e-16 Identity = 71/267 (26.59%), Postives = 130/267 (48.69%), Query Frame = 3 Query: 12 ACANYPEYWIRYVLCMEASGSMDLAHNALARATHVFVKRLPEIHLFAARFKEQNGDIDGARAAYQLVHTETSPGLLEAIIKHANMERRLGNLEDAFSLYEQAIAIEKGKEHSQTLPMLYAQYSRFLHLVSRNAEKARQILVDSLDHVQLSKPLLEALIHFESIQSSPKQIDFLEQLVEKFLMSNSDSPSTANAAEREELSCVFLEFLGLFG-DAQLIKKAEDRHARLFLPHRSTSELRKRHAEDFLASERAKMGQSYSGAPSPGQSL 809 ACA Y E+WI+Y +E S S + + +A V + + P +HL A F+EQ G ID AR+ + V PGL ++ ++ERR GN+E+A +L + AI G+ S++ + +R L V ++ +A+++L+++++ + + L L+ E + + ++ L S+ S ++R+ ++FL FG D + A ++H RL + E KR AE+ AK ++ + + GQ + Sbjct: 457 ACALYEEFWIKYAKYLE-SYSTEAVRHIYKKACTVHLPKKPNVHLLWAAFEEQQGSIDEARSILKAVEVSV-PGLAMVRLRRVSLERRHGNMEEAEALLQDAIT--NGRNSSES-SFYSVKLARQLVKVQKSIGRAKKVLLEAVEKDETNPKLYLNLLELEYSGDVQQNEAEIIACFDRALSSSMALESRITFSQRK------VDFLEDFGSDINTLMAAYEQHQRLL----AEQESFKRKAENGSEEPDAKRQRTDDQSVASGQMM 708
BLAST of EY756564 vs. ExPASy Swiss-Prot
Match: PRP39_HUMAN (Pre-mRNA-processing factor 39 OS=Homo sapiens GN=PRPF39 PE=1 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 1.436e-14 Identity = 76/293 (25.94%), Postives = 130/293 (44.37%), Query Frame = 3 Query: 12 ACANYPEYWIRYVLCMEASGSMDLAHNALARATHVFVKRLPEIHLFAARFKEQNGDIDGARAAYQLVHTETSPGLLEAIIKHANMERRLGNLEDAFSLYEQAIAIEKGKEHSQTLPMLYA-QYSRFLHLVSRNAEKARQILVDSLDHVQLSKPLLEALIHFESIQSSPKQIDFLEQLVEKFLMSNSDSPSTANAAEREELSCVFLEFLGLFG-DAQLIKKAEDRHARLFLPHRSTS----------ELRKRHAEDFLASERAKM-GQSYSGAPSPGQSLMGAYPSSQNPWAAG 851 +CA Y E+WI+Y ME + S++ + +RA + + + P +H+ A F+EQ G+I+ AR + E GL ++ ++ERR GNLE+A L + AI K S YA + +R L + +N K+R++L+++++ + + L L+ E + + + +K + + ++R+ +EFL FG D + A D H L S E +K H ED +S + G + S Y + QNPW G Sbjct: 382 SCALYEEFWIKYAKYME-NHSIEGVRHVFSRACTIHLPKKPMVHMLWAAFEEQQGNINEARNILK-TFEECVLGLAMVRLRRVSLERRHGNLEEAEHLLQDAIKNAKSNNESS----FYAVKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSGDLKQNEENILNCFDKAVHGSLPIKMRITFSQRK------VEFLEDFGSDVNKLLNAYDEHQTLLKEQDSLKRKAENGSEEPEEKKAHTEDTTSSSTQMIDGDLQANQAVYNYSAWYQY-NYQNPWNYG 661
BLAST of EY756564 vs. ExPASy Swiss-Prot
Match: PRP39_MOUSE (Pre-mRNA-processing factor 39 OS=Mus musculus GN=Prpf39 PE=2 SV=3) HSP 1 Score: 79.7221 bits (195), Expect = 2.449e-14 Identity = 74/286 (25.87%), Postives = 130/286 (45.45%), Query Frame = 3 Query: 12 ACANYPEYWIRYVLCMEASGSMDLAHNALARATHVFVKRLPEIHLFAARFKEQNGDIDGARAAYQLVHTETSPGLLEAIIKHANMERRLGNLEDAFSLYEQAIAIEKGKEHSQTLPMLYA-QYSRFLHLVSRNAEKARQILVDSL----DHVQLSKPLLEALIHFESIQSSPKQIDFLEQLVEKFLMSNSDSPSTANAAE-REELSCVFLEFLGLFGDAQLIKKAEDRHARLFLPHRSTSELRKRHAEDFLASERAKMGQSYSGAPSPGQSLMGAYPSSQNPWAAG 851 +CA Y E+WI+Y ME + S++ + +RA V + + P H+ A F+EQ G+I+ AR + E GL ++ ++ERR GN+E+A L + AI K S YA + +R L + +N K+R++L++++ ++ +L LLE + Q+ ++ ++ + L + E E+ + L + + Q + K +D R E +K H ED L+S + G + + S Y + QNPW G Sbjct: 380 SCALYEEFWIKYAKYME-NHSIEGVRHVFSRACTVHLPKKPMAHMLWAAFEEQQGNINEARIILRTFE-ECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDAIKNAKSNNESS----FYAIKLARHLFKIQKNLPKSRKVLLEAIEKDKENTKLYLNLLEMEYSCDLKQNEENILNCFDKAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQDTLKRKAENGSEEPEEKKAHTED-LSSAQIIDGDLQANQAAYNYSAWYQY-NYQNPWNYG 657 The following BLAST results are available for this feature:
BLAST of EY756564 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY756564 ID=EY756564; Name=EY756564; organism=Citrus sinensis; type=EST; length=893bpback to top |