EY756545
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756545 vs. ExPASy Swiss-Prot
Match: PSBR_ARATH (Photosystem II 10 kDa polypeptide, chloroplastic OS=Arabidopsis thaliana GN=PSBR PE=1 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 2.058e-44 Identity = 92/127 (72.44%), Postives = 101/127 (79.53%), Query Frame = 2 Query: 92 PAPFTVEKSAARGLPSL--AKTSFKIVAKG-GKIKTDKPYGVNGGMDLREGLDASGRKANGKGVYQFVDKYRANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTXXXXXXXXXXXVYNTSALAQ 463 PA FTVEK+AARGLPSL A+ SFKIVA G KIKTDKP+G+NG MDLR+G+DASGRK G GVY++VDKY ANVDGYSPIYNEN+WS SGDVY GG TGLAIWAVT VYNTSALAQ Sbjct: 14 PAGFTVEKTAARGLPSLTRARPSFKIVASGVKKIKTDKPFGINGSMDLRDGVDASGRKGKGYGVYKYVDKYGANVDGYSPIYNENEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSALAQ 140
BLAST of EY756545 vs. ExPASy Swiss-Prot
Match: PSBR_TOBAC (Photosystem II 10 kDa polypeptide, chloroplastic OS=Nicotiana tabacum GN=PSBR PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.585e-44 Identity = 88/127 (69.29%), Postives = 101/127 (79.53%), Query Frame = 2 Query: 92 PAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMDLREGLDASGRKANGKGVYQFVDKYRANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTXXXXXXXXXXXVYNTSALAQ 463 PAPF+VEK+A +GLPSLA++S F++ A G K+KTDKPYG+NG M LR+G+DASGRK GKGVYQFVDKY ANVDGYSPIYN +DWSPSGDVY GG TGLAIWAVT V+NTSALAQ Sbjct: 10 PAPFSVEKTAVKGLPSLARSSSSFRVQASGVKKLKTDKPYGINGSMSLRDGVDASGRKQKGKGVYQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGGTTGLAIWAVTLVGILAGGALLVFNTSALAQ 136
BLAST of EY756545 vs. ExPASy Swiss-Prot
Match: PSBR_BRACM (Photosystem II 10 kDa polypeptide, chloroplastic OS=Brassica campestris GN=PSBR PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 5.069e-43 Identity = 90/128 (70.31%), Postives = 100/128 (78.12%), Query Frame = 2 Query: 92 PAPFTVEKSAARGLPSLAK---TSFKIVAKG-GKIKTDKPYGVNGGMDLREGLDASGRKANGKGVYQFVDKYRANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTXXXXXXXXXXXVYNTSALAQ 463 PA FTVEK +ARGLPSL + +SF+IVA G KIKTDKP+GVNG MDLR+G+DASGRK G GVY+FVDKY ANVDGYSPIYNE++WS SGDVY GG TGLAIWAVT VYNTSALAQ Sbjct: 14 PAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSMDLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSALAQ 141
BLAST of EY756545 vs. ExPASy Swiss-Prot
Match: PSBR_SOLTU (Photosystem II 10 kDa polypeptide, chloroplastic OS=Solanum tuberosum GN=PSBR PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.286e-42 Identity = 85/124 (68.55%), Postives = 99/124 (79.84%), Query Frame = 2 Query: 101 FTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMDLREGLDASGRKANGKGVYQFVDKYRANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTXXXXXXXXXXXVYNTSALAQ 463 FT+EK++ +GLPSLA++S FK+VA G K+KTDKPYG+NG M LR+G+DASGRK GKGVYQ+VDKY ANVDGYSPIYN ++WSPSGDVY GG TGLAIWAVT VYNTSALAQ Sbjct: 15 FTLEKTSVKGLPSLARSSSSFKVVASGVKKLKTDKPYGINGSMALRDGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTLVGILAGGALLVYNTSALAQ 138
BLAST of EY756545 vs. ExPASy Swiss-Prot
Match: PSBR_SOLLC (Photosystem II 10 kDa polypeptide, chloroplastic OS=Solanum lycopersicum GN=PSBR PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.130e-41 Identity = 84/124 (67.74%), Postives = 97/124 (78.23%), Query Frame = 2 Query: 101 FTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMDLREGLDASGRKANGKGVYQFVDKYRANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTXXXXXXXXXXXVYNTSALAQ 463 FT+EK + +GLPSL ++S FK+VA G K+KTDKPYG+NG M LR+G+DASGRK GKGVYQ+VDKY ANVDGYSPIYN ++WSPSGDVY GG TGLAIWAVT VYNTSALAQ Sbjct: 15 FTLEKISVKGLPSLTRSSSSFKVVASGVKKLKTDKPYGINGSMALRDGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTLLGILAGGALLVYNTSALAQ 138
BLAST of EY756545 vs. ExPASy Swiss-Prot
Match: PSBR_SPIOL (Photosystem II 10 kDa polypeptide, chloroplastic OS=Spinacia oleracea GN=PSBR PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 8.375e-38 Identity = 81/128 (63.28%), Postives = 95/128 (74.22%), Query Frame = 2 Query: 92 PAPFTVE-KSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMDLREGLDASGRKANGKGVYQFVDKYRANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTXXXXXXXXXXXVYNTSALAQ 463 P+ F V+ KSA +GLPSL+++S F + A G KIK DKP G+ GGM LR+G+D+SGRK GKGVYQFVDKY ANVDGYSPIYNE +W+P+GDVY GG TGL IWAVT VYNTSALAQ Sbjct: 13 PSSFGVDTKSAVKGLPSLSRSSASFTVRASGVKKIKVDKPLGIGGGMKLRDGVDSSGRKPTGKGVYQFVDKYGANVDGYSPIYNEEEWAPTGDVYAGGTTGLLIWAVTLAGLLAGGALLVYNTSALAQ 140
BLAST of EY756545 vs. ExPASy Swiss-Prot
Match: PSBR_HORVU (Photosystem II 10 kDa polypeptide, chloroplastic OS=Hordeum vulgare GN=PSBR PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.885e-30 Identity = 67/119 (56.30%), Postives = 81/119 (68.07%), Query Frame = 2 Query: 107 VEKSAARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGRKANGKGVYQFVDKYRANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTXXXXXXXXXXXVYNTSALA 460 +++S G+ A+ S IVAK K ++T +PYG GG+ +EG+DASGR A GKGVYQF DKY ANVDGYSPIY +WSPSGDVY GG TGL +WAVT VY+TSALA Sbjct: 19 LQRSKLGGVRPSARPSLVIVAKKAKKVQTAQPYGPGGGVAFKEGVDASGRVAKGKGVYQFADKYGANVDGYSPIYTPEEWSPSGDVYVGGKTGLFLWAVTLAGILLGGALLVYSTSALA 137 The following BLAST results are available for this feature:
BLAST of EY756545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY756545 ID=EY756545; Name=EY756545; organism=Citrus sinensis; type=EST; length=843bpback to top |