EY756497

Overview
NameEY756497
Unique NameEY756497
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY756497_ssr16 microsatellite EY756497_ssr16:16..27. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2746 contig Csv1_Contig2746:110..976. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756497 vs. ExPASy Swiss-Prot
Match: P2A15_ARATH (F-box protein PP2-A15 OS=Arabidopsis thaliana GN=PP2A15 PE=2 SV=1)

HSP 1 Score: 396.356 bits (1017), Expect = 1.130e-109
Identity = 185/238 (77.73%), Postives = 210/238 (88.24%), Query Frame = 1
Query:   79 MGASLSSLTD--NGESMGPGLGDIPESCVACVFMYLTPPEICNLARLNHAFRGAASSDSVWENKLPSNYQDLLDLMPPERYLNLSKKEIFALLSRPVPFDDGNKEVWLDRVTGRVCLSISTKAMAITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDGVVKFPLPADVYTVSFRLHLGKIAKRLGRRVCNFEHTHGWDIKPVRXEXSTSDGQQASSECYLDKMETDDANGYHKRG 786
            MG+SLS+L D  NG +MGPGLGDIPESCVACVFMYLTPPEICNLA LN +FRGAASSDSVWE KLP NYQDLLDL+PPERY +LSKK+IFA+LSRP+PFDD NKEVW+DRVTGRVC++IS + M+ITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDG V+F LP  VY++SFR+HLG+  KRLGRRVC+FE THGWD+KPVR   STSDGQ+AS E YLD +E ++A G HKRG
Sbjct:    1 MGSSLSNLNDGTNGLAMGPGLGDIPESCVACVFMYLTPPEICNLAGLNRSFRGAASSDSVWEKKLPENYQDLLDLLPPERYHSLSKKDIFAVLSRPIPFDDDNKEVWIDRVTGRVCMAISARGMSITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDGTVRFHLPPGVYSLSFRIHLGRFTKRLGRRVCHFELTHGWDLKPVRFSLSTSDGQEASCEYYLDDVERNEALGKHKRG 238          
BLAST of EY756497 vs. ExPASy Swiss-Prot
Match: P2A12_ARATH (F-box protein PP2-A12 OS=Arabidopsis thaliana GN=P2A12 PE=2 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 8.193e-68
Identity = 125/230 (54.35%), Postives = 158/230 (68.70%), Query Frame = 1
Query:   88 SLSSLTDNGESMGPGLGDIPESCVACVFMYLTPPEICNLARLNHAFRGAASSDSVWENKLPSNYQDLLDLMPPERYLNLSKKEIFALLSRPVPFDDGNKEVWLDRVTGRVCLSISTKAMAITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDGVVKFPLPADVYTVSFRLHLGKIAKRLGRRVCNFEHTHGWDIKPVRXEXSTSDGQQASSECYLDKMETDDANGYH 777
            S SS   +   + PGLGD+PE+CVA +   L P EIC  ++LN AFRGA+ +D VWE+KLP NY+D+L+ +      NL K+ ++A LSR   FDD  K+VW+D+ T  VCLSIS K ++ITGI+DRRYW+ IPT+ESRF  VAYLQQIWWFEVDG + FP P   Y++ FRL LG+  K  GRRVCN E  HGWDIKPVR +  T DGQ +SS+C L    T+  N  H
Sbjct:   13 SSSSCFGDRNILKPGLGDLPEACVAIIVENLDPVEICRFSKLNRAFRGASWADCVWESKLPQNYRDVLEKILGGFPENLQKRHLYAFLSRINSFDDATKKVWIDKRTSGVCLSISAKGLSITGIDDRRYWSHIPTDESRFSSVAYLQQIWWFEVDGEIDFPFPVGTYSIFFRLQLGRSGKWFGRRVCNTEQVHGWDIKPVRFQLWTEDGQYSSSQCML----TERGNWIH 238          
BLAST of EY756497 vs. ExPASy Swiss-Prot
Match: P2A13_ARATH (F-box protein PP2-A13 OS=Arabidopsis thaliana GN=PP2A13 PE=1 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 3.113e-67
Identity = 126/229 (55.02%), Postives = 164/229 (71.62%), Query Frame = 1
Query:   79 MGASLSS------LTDNGESMGPGLGDIPESCVACVFMYLTPPEICNLARLNHAFRGAASSDSVWENKLPSNYQDLLDLMPPERYLN-LSKKEIFALLSRPVPFDDGNKEVWLDRVTGRVCLSISTKAMAITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDGVVKFPLPADVYTVSFRLHLGKIAKRLGRRVCNFEHTHGWDIKPVRXEXSTSDGQQASSECYLD 744
            MGA++S         D+  S    L D+PE+CVA +   L PPEIC LARLN  FR A+S+D +WE+KLP+NY+ +   +  E  L  L KK+++A LS+P  FDDG KE+W+D+ TGR+CLSIS+KA+ ITGI+DRRYW+ IPT+ESRF   AY+QQIWWFEV G  +   P+  Y++ FR+ LGK +KRLGRR+CN EH HGWDIKPVR + +TSD QQA S CYL+
Sbjct:    1 MGANISGGSPEFDRNDDVYSRKLRLVDLPENCVALIMTRLDPPEICRLARLNRMFRRASSADFIWESKLPANYRVIAHKVFDEITLTKLIKKDLYAKLSQPNLFDDGTKELWIDKNTGRLCLSISSKALRITGIDDRRYWSHIPTDESRFQSAAYVQQIWWFEVGGEFEIQFPSGTYSLFFRIQLGKTSKRLGRRICNSEHIHGWDIKPVRFQLATSDNQQAVSLCYLN 229          
BLAST of EY756497 vs. ExPASy Swiss-Prot
Match: P2A11_ARATH (F-box protein PP2-A11 OS=Arabidopsis thaliana GN=PP2A11 PE=1 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.446e-64
Identity = 120/240 (50.00%), Postives = 163/240 (67.92%), Query Frame = 1
Query:   88 SLSSLTDNGESMGPGLGDIPESCVACVFMYLTPPEICNLARLNHAFRGAASSDSVWENKLPSNYQDLLDLMPPERYLNLSKKEIFALLSRPVPFDDGNKEVWLDRVTGRVCLSISTKAMAITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDGVVKFPLPADVYTVSFRLHLGKIAKRLGRRVCNFEHTHGWDIKPVRXEXSTSDGQQASSECYLDKMETDDANGYHKRGCG*IIGK 807
            +LSS   + + + PGLGD+PESCVA +   L P EIC  ++LN AF GA+ +D VWE+KLP +Y+ +L+ +      NL K++IF  LSR   FD+GNK+ W+D+ TG +CL  S K ++ITGI+DRRYW+ IP+++SRF  VAY+QQIWWF+VDG + FP PA  Y+V FRL LGK  KR G +V + E  HGW+IKPVR + ST DGQ +SS+C L    T+  N  H      ++GK
Sbjct:   11 NLSSCYGDRDLLQPGLGDLPESCVALILQNLDPVEICRFSKLNTAFHGASWADFVWESKLPPDYKLILEKILGSFPDNLRKRDIFTFLSRVNSFDEGNKKAWVDKRTGGLCLCTSAKGLSITGIDDRRYWSHIPSDDSRFASVAYVQQIWWFQVDGEIDFPFPAGTYSVYFRLQLGKPGKRFGWKVVDTEQVHGWNIKPVRFQLSTEDGQHSSSQCML----TEAGNWSHYHAGDFVVGK 246          
BLAST of EY756497 vs. ExPASy Swiss-Prot
Match: P2A14_ARATH (F-box protein PP2-A14 OS=Arabidopsis thaliana GN=PP2A14 PE=1 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 4.075e-59
Identity = 114/232 (49.14%), Postives = 156/232 (67.24%), Query Frame = 1
Query:   79 MGASLSSLTDNGESMGP--GLGDIPESCVACVFMYLTPPEICNLARLNHAFRGAASSDSVWENKLPSNYQDLLDLMPPERY-------LNLSKKEIFALLSRPVPFDDGNKEVWLDRVTGRVCLSISTKAMAITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDGVVKFPLPADVYTVSFRLHLGKIAKRLGRRVCNFEHTHGWDIKPVRXEXSTSDGQQASSECYLDK 747
            MGA+ SS+  +    G   GL D+PE+C+  +FMY+ PPEIC LAR+N +F  A+ SD+VWE+KLPSNY+ L+  +  ++        L   KKEI+A L RP  FD G KE WLD+ +G+V L+IS KAM ITGI+DRRYW  I ++ESRF  + YL+QIWW E  G ++F      Y++ F++ LGK  ++ GR+ C+ +  HGWDIKPVR + STSDGQ A SE +LD+
Sbjct:    1 MGAASSSIVRSEPFAGKLCGLEDVPENCITAMFMYMEPPEICLLARVNKSFHRASRSDAVWEDKLPSNYKFLVRRILEDQQQVGVKDKLIYRKKEIYARLCRPNLFDTGTKEAWLDKRSGKVFLAISPKAMKITGIDDRRYWEHISSDESRFGSITYLRQIWWLEAVGKIRFEFAPGKYSLLFKIQLGKPIRKCGRKTCSLDQVHGWDIKPVRFQLSTSDGQCAMSERHLDE 232          
BLAST of EY756497 vs. ExPASy Swiss-Prot
Match: P2B10_ARATH (F-box protein PP2-B10 OS=Arabidopsis thaliana GN=PP2B10 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.028e-25
Identity = 51/137 (37.23%), Postives = 80/137 (58.39%), Query Frame = 1
Query:  145 PESCVACVFMYLTPPEICNLARLNHAFRGAASSDSVWENKLPSNYQDLLDLMPPERYLNLSKKEIFALLSRPVPFDDGNKEVWLDRVTGRVCLSISTKAMAITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDG 555
            PE C++ +  +  P + C  A ++  F     SD +WE  LP++Y+ L+   PP R  +  K+  F+L + PV FDD  K VWL++ +G+ CL +S   ++I   ++ +YW WIP  ESRF  VA L+ + WFE+ G
Sbjct:   18 PEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYESLI---PPSRVFSSKKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLMLSAMNLSIIWGDNPQYWQWIPIPESRFEKVAKLRDVCWFEIRG 151          
BLAST of EY756497 vs. ExPASy Swiss-Prot
Match: PP2B2_ARATH (Putative F-box protein PP2-B2 OS=Arabidopsis thaliana GN=PP2B2 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.257e-24
Identity = 56/146 (38.36%), Postives = 82/146 (56.16%), Query Frame = 1
Query:  124 GPGLGD-IPESCVACVFMYLTPPEICNLARLNHAFRGAASSDSVWENKLPSNYQDLLDLMPPERYLNLSKKEIFALLSRPVPFDDGNKEVWLDRVTGRVCLSIS-TKAMAITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDG 555
            GP L D +PE C++ +  + +P + C  A ++  F  A +SDSVW+  LPS+Y     L+PP R  +  K+  FA+   PV  +DG K  WL++  G+ C  +S  K+M IT +   +YW WI   E+RF  V  L  + WFEV G
Sbjct:   38 GPSLFDNLPEDCISNIISFTSPRDACVAASVSKTFESAVNSDSVWDKFLPSDYS---SLVPPSRVFSSKKELYFAICDNPVLVEDGGKSFWLEKENGKKCFMLSPKKSMWITWVSTPQYWRWISIPEARFEEVPELLNVCWFEVRG 180          
BLAST of EY756497 vs. ExPASy Swiss-Prot
Match: FB95_ARATH (F-box protein At2g02240 OS=Arabidopsis thaliana GN=At2g02240 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.706e-23
Identity = 55/152 (36.18%), Postives = 83/152 (54.61%), Query Frame = 1
Query:  112 GESMGPGLGD---IPESCVACVFMYLTPPEICNLARLNHAFRGAASSDSVWENKLPSNYQDLLDLMPPERYLNLSKKEI-FALLSRPVPFDDGNKEVWLDRVTGRVCLSISTKAMAITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDG 555
            GE + PG      +PE C++ +  + +P + C  A ++  F  A SSD VW+  LP  Y+ L+        +  SKKE+ FAL   PV  +DG K  WL++ +G+ C+ +S+K + IT      YW WI   ESRF+ +A L  + WFE+ G
Sbjct:   51 GEIVSPGTSPFDVLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVS----RSRVFASKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEYWQWISIPESRFNKIAELLDVCWFEIRG 198          
BLAST of EY756497 vs. ExPASy Swiss-Prot
Match: PP2B8_ARATH (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana GN=PP2B8 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.514e-21
Identity = 51/142 (35.92%), Postives = 79/142 (55.63%), Query Frame = 1
Query:  133 LGDIPESCVACVFMYLTPPEICNLARLNHAFRGAASSDSVWENKLPSNYQDLLDLMPPERYLNLSKKEI-FALLSRPVPFDDGNKEVWLDRVTGRVCLSISTKAMAITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDG 555
            L D+PE CV+ +  + +P + C LA ++  F  A  SD VWE  +P  Y+ L+      ++L  SKKE+ FAL  + V  DDG K +W+++   + C+ IS   +AI      + W WIP  ++RF  VA L ++  FE+ G
Sbjct:   36 LDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSRAFKFL--SKKELYFALCDKSVLIDDGKKSLWIEKANAKRCIMISAMNLAIAWGNSPQSWRWIPDPQARFETVAELLEVCLFEIRG 175          
BLAST of EY756497 vs. ExPASy Swiss-Prot
Match: PP2B6_ARATH (Putative F-box protein PP2-B6 OS=Arabidopsis thaliana GN=PP2B6 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.674e-20
Identity = 56/174 (32.18%), Postives = 88/174 (50.57%), Query Frame = 1
Query:   64 KLKIEMGASLSSLTDNGESMGPGLG----------DIPESCVACVFMYLTPPEICNLARLNHAFRGAASSDSVWENKLPSNYQDLLDLMPPERYLNLSKKEIFALLSRPVPFDDGNKEVWLDRVTGRVCLSISTKAMAITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDG 555
            K++  +G+S      + ES+G G G          D+PE C++ +  + +P ++C  A ++ +F  A   DS+WE  LPS Y+ L+   PP R  +  K   F L   PV  +DG K  WL+  +G+ C+ ++ K + ITG  +  YW WI   ES F  V  L     F++ G
Sbjct:   12 KIRQVLGSSSKVQKHDVESIGGGGGEIVPGHSPFDDLPEDCISNIISFTSPRDVCVSASVSKSFAHAVQCDSIWEKFLPSEYESLI---PPWRVFSSKKDLYFTLCYDPVLVEDGKKSFWLETASGKKCVLLAAKELWITGGNNPEYWQWIELCESSFEKVPELLNNRSFQMGG 182          
The following BLAST results are available for this feature:
BLAST of EY756497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
P2A15_ARATH1.130e-10977.73F-box protein PP2-A15 OS=Arabidopsis thaliana GN=P... [more]
P2A12_ARATH8.193e-6854.35F-box protein PP2-A12 OS=Arabidopsis thaliana GN=P... [more]
P2A13_ARATH3.113e-6755.02F-box protein PP2-A13 OS=Arabidopsis thaliana GN=P... [more]
P2A11_ARATH1.446e-6450.00F-box protein PP2-A11 OS=Arabidopsis thaliana GN=P... [more]
P2A14_ARATH4.075e-5949.14F-box protein PP2-A14 OS=Arabidopsis thaliana GN=P... [more]
P2B10_ARATH5.028e-2537.23F-box protein PP2-B10 OS=Arabidopsis thaliana GN=P... [more]
PP2B2_ARATH4.257e-2438.36Putative F-box protein PP2-B2 OS=Arabidopsis thali... [more]
FB95_ARATH4.706e-2336.18F-box protein At2g02240 OS=Arabidopsis thaliana GN... [more]
PP2B8_ARATH1.514e-2135.92Putative F-box protein PP2-B8 OS=Arabidopsis thali... [more]
PP2B6_ARATH1.674e-2032.18Putative F-box protein PP2-B6 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-C08-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756497 ID=EY756497; Name=EY756497; organism=Citrus sinensis; type=EST; length=867bp
CCACGCGTCCGAAGCGAAGAAGAAGAAGGGAAAAAAAGGCTTTGGTAAAT
TCAGTAAAGTAATAAATTAAAAATAGAAATGGGGGCGTCGCTATCGAGCC
TGACCGACAACGGAGAGAGCATGGGGCCGGGACTGGGAGACATACCGGAG
AGCTGCGTGGCGTGCGTGTTCATGTACTTGACGCCGCCGGAGATTTGCAA
TCTCGCCAGATTAAACCACGCTTTCCGCGGTGCGGCGTCGTCTGATTCCG
TGTGGGAAAACAAGCTCCCTTCTAACTATCAAGATCTGCTCGATTTGATG
CCTCCTGAACGCTACCTTAACTTGTCCAAAAAAGAAATTTTTGCCCTCCT
CTCCCGCCCGGTTCCCTTCGATGATGGCAATAAGGAAGTGTGGTTAGATA
GAGTGACGGGAAGAGTTTGCTTGTCAATATCAACAAAGGCTATGGCAATC
ACCGGAATTGAGGATCGCAGATATTGGAATTGGATTCCCACTGAAGAATC
AAGATTCCATGTGGTGGCGTATTTGCAACAAATATGGTGGTTCGAGGTGG
ATGGGGTAGTGAAGTTTCCACTTCCTGCTGATGTCTACACCGTGTCATTC
AGGCTTCATCTTGGAAAGATTGCCAAGAGATTGGGGCGACGAGTGTGTAA
CTTTGAACATACCCATGGTTGGGATATAAAGCCTGTACGGNTGGAGNTGT
CTACTTCAGATGGTCAGCAAGCATCATCTGAGTGCTATTTGGACAAGATG
GAAACAGATGACGCGAATGGCTACCATAAGCGGGGGTGTGGATAGATAAT
AGGGAAGTGAGTTTTGTGTCATGACTCGGAACCAGCACTGAAGTCCATTT
TCATGAAACGATAGATT
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