EY756492

Overview
NameEY756492
Unique NameEY756492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY756492_ssr461 microsatellite EY756492_ssr461:461..484. BLAST: Citrus ESTs to Prunus persica proteins V1
EY756492_ssr485 microsatellite EY756492_ssr485:485..499. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig8869 contig Csv1_Contig8869:190..774. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756492 vs. ExPASy Swiss-Prot
Match: WAX2_ARATH (Protein WAX2 OS=Arabidopsis thaliana GN=WAX2 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.943e-20
Identity = 53/140 (37.86%), Postives = 79/140 (56.43%), Query Frame = 2
Query:   14 TICKDDYEKLKLRIPVEAQHNLVLSTSY-AAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCD-IHQVWHASLRHG 427
            T+  + ++K++   PVE Q+NLV  T Y AA   K W+VG  LT +EQ+ AP GT F  +   P  K R++C Y    AM +P  +  + +CE  + R V+ A    G++H LEGW  +E G    D I  VW A++++G
Sbjct:  484 TLSMERFQKIQKEAPVEFQNNLVQVTKYNAAQHCKTWIVGKWLTPREQSWAPAGTHFHQFVVPPILKFRRNCTYGDLAAMKLPKDVEGLGTCEYTMERGVVHACHAGGVVHMLEGWKHHEVGAIDVDRIDLVWEAAMKYG 623          
The following BLAST results are available for this feature:
BLAST of EY756492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
WAX2_ARATH6.943e-2037.86Protein WAX2 OS=Arabidopsis thaliana GN=WAX2 PE=1 ... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-C03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756492 ID=EY756492; Name=EY756492; organism=Citrus sinensis; type=EST; length=585bp
CCACGCGTCCGCCACGATATGCAAGGACGATTATGAGAAGCTTAAGCTCA
GGATCCCTGTGGAAGCTCAACATAATTTGGTCCTGTCAACAAGTTACGCT
GCTCACAAGACGAAGATTTGGTTAGTGGGAGACGATTTGACAGGAAAGGA
ACAAGCAAGGGCACCAAAAGGCACAATATTCATTCCGTATACACAGATAC
CACCAAGGAAATTGCGGAAAGATTGCTTCTACCATTCGACTCCAGCAATG
ATAATTCCTCCCTCTTTAAGTAACATGCATTCCTGTGAGAACTGGCTGGG
AAGGAGGGTGATGAGTGCTTGGCGTATAGCTGGAATAATACACGCCTTGG
AGGGATGGGATTTGAACGAGTGTGGGCAAACTATGTGCGACATCCACCAA
GTTTGGCATGCCTCTCTCCGCCATGGATTCCGCCCTCTTTTCCCTGTTGC
TTGAATCTTCTATTATTATTATTATTATTATTATCATCATCATCATCATT
ATTGTAGACTCATAAACGCTAGCTAGATAATTCGCTTTCGCAAATAATAA
AGCTAACTATTATTAAAAAAAAAAAAAAAAAAAAA
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