EY756490

Overview
NameEY756490
Unique NameEY756490
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756490 vs. ExPASy Swiss-Prot
Match: VPS2C_ARATH (Vacuolar protein sorting-associated protein 2 homolog 3 OS=Arabidopsis thaliana GN=VPS2.3 PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.499e-76
Identity = 152/210 (72.38%), Postives = 164/210 (78.10%), Query Frame = 3
Query:   51 MNIFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELEKRLAALR 680
            MNIF+KKPNP+E LRESKREM  ATRG+EKEIG+LQ EEKKLV EIKRTAK+GNEGATKILARQLIRLRQQIANLQGSRAQ+RGIATHTQAMHAH+SV                 M+PAKQAKVMREFQKQSAQMDMTTEMMSD+I                  QVLDEIG+D+ASQLS+APKGKI  K  ED  SSGIDELEKRLAALR
Sbjct:    1 MNIFTKKPNPREVLRESKREMTQATRGIEKEIGSLQSEEKKLVLEIKRTAKSGNEGATKILARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHTSVAAGMQGATKAMAAMSKNMDPAKQAKVMREFQKQSAQMDMTTEMMSDSIDDALDNDEAEDETEDLTNQVLDEIGIDIASQLSSAPKGKIGGKKAEDVGSSGIDELEKRLAALR 210          
BLAST of EY756490 vs. ExPASy Swiss-Prot
Match: VPS2B_ARATH (Vacuolar protein sorting-associated protein 2 homolog 2 OS=Arabidopsis thaliana GN=VPS2.2 PE=2 SV=2)

HSP 1 Score: 234.187 bits (596), Expect = 7.084e-61
Identity = 130/220 (59.09%), Postives = 155/220 (70.45%), Query Frame = 3
Query:   51 MNIFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASK----------NTEDASSSGIDELEKRLAALR 680
            MNIF KK  PK+ALR SKREM  ATRG+E+EI +LQ EEK+LVAEIK+TAKTGNE ATKILARQL+RLRQQI NLQGSRAQIRG+ THTQA++A +S+                QM P KQAKV+++FQKQSAQ+DMT EMMS+ I                  QVLDEIGV VASQLS+APKG+IA+K            +++ SS +DELEKRLA+LR
Sbjct:    1 MNIFKKKTTPKDALRTSKREMAVATRGIEREITSLQLEEKRLVAEIKKTAKTGNEAATKILARQLVRLRQQITNLQGSRAQIRGVTTHTQALYASTSISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEEETEDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPPASTAATNKNSESSEVDELEKRLASLR 220          
BLAST of EY756490 vs. ExPASy Swiss-Prot
Match: VPS2A_ARATH (Vacuolar protein sorting-associated protein 2 homolog 1 OS=Arabidopsis thaliana GN=VPS2.1 PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 4.634e-28
Identity = 77/220 (35.00%), Postives = 116/220 (52.73%), Query Frame = 3
Query:   54 NIFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKI---ASKN-------TEDASSSGID-ELEKRLAALR 680
            +IF K+  P E LRE+KR +  + R +E+E   LQ +EKKL+ EIK+TAK G  GA K++A+ LIR R QI      ++Q++G++   Q + +  ++                QM      K+M+EF++Q+ +M+M +E+M D I                  QVLDEIG+D+  +L  AP G +   A+KN       T    S GID +L+ RL  LR
Sbjct:    4 SIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLINEIKKTAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVSEVMGDAIDDALEGDEEEEETEDLVSQVLDEIGIDINQELVNAPSGAVAVPAAKNKVVQAEATGAEDSGGIDSDLQARLDNLR 223          
BLAST of EY756490 vs. ExPASy Swiss-Prot
Match: CH2BB_XENLA (Charged multivesicular body protein 2b-B OS=Xenopus laevis GN=chmp2b-B PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.338e-26
Identity = 63/208 (30.29%), Postives = 115/208 (55.29%), Query Frame = 3
Query:   66 KKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGI--DELEKRLAALRI 683
            KK    + +RE  +E++   R + ++  AL+++EK+L  EIK+ AKTGN+ A ++LA+QL++LR+Q        +++  ++T T+ M +   +                +M+P K  + M+ FQK++ +M+MT EM++DT+                  QVLDEIG++++ +++ AP       +T  A S GI  +E+E++L AL +
Sbjct:    6 KKKTVDDIIREQNKELRGTQRAITRDRAALEKQEKQLEMEIKKMAKTGNKDACRVLAKQLVQLRKQKTRTYAVSSKVTSMSTQTKVMSSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTDEMINDTLDDIFDASEDEEESQDIVNQVLDEIGIEISGKMAKAPSAAKGLPSTSAAKSKGISDEEIERQLKALGV 213          
BLAST of EY756490 vs. ExPASy Swiss-Prot
Match: CHM2B_XENTR (Charged multivesicular body protein 2b OS=Xenopus tropicalis GN=chmp2b PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.262e-25
Identity = 62/208 (29.81%), Postives = 115/208 (55.29%), Query Frame = 3
Query:   66 KKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGI--DELEKRLAALRI 683
            KK    + +RE  +E++   R + ++  AL+++EK+L  EIK+ AK GN+ A ++LA+QL++LR+Q        +++  ++T T+ M +   +                +M+P K  + M+ FQK++ +M+MT EM++DT+                  QVLDEIG++++ +++ AP       +T  + SSGI  +E+E++L AL +
Sbjct:    6 KKKTVDDIIREQNKELRGTQRAITRDRAALEKQEKQLEMEIKKMAKAGNKDACRVLAKQLVQLRKQKTRTYAVSSKVTSMSTQTKVMSSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDASDDEEESQDIVNQVLDEIGIEISGKMAKAPSAAKGLPSTSASKSSGISDEEIERQLKALGV 213          
BLAST of EY756490 vs. ExPASy Swiss-Prot
Match: CHM2B_DANRE (Charged multivesicular body protein 2b OS=Danio rerio GN=chmp2b PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.648e-25
Identity = 62/213 (29.11%), Postives = 117/213 (54.93%), Query Frame = 3
Query:   51 MNIFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGI--DELEKRLAALRI 683
            M    KK    + ++E  +E++   R + ++  AL+++EK+L  EIK+ AKTGN  A K+LA+QL+++R+Q        +++  ++T T+ M++   +                +M+P K  + ++ FQK++A+MDMT EMM+DT+                  QVLDEIG++++ +++ AP     + +   A + GI  +++E++L AL +
Sbjct:    1 MTSLFKKKTVDDVIKEQNKELRGTQRQIARDRTALEKQEKQLEMEIKKMAKTGNRDACKVLAKQLVQVRKQKTRTYAVSSKVTSMSTQTKLMNSQMKMAGAMATTTKTMQAVNKKMDPKKTMQTLQNFQKETAKMDMTEEMMNDTLDEIFEDSGDEEESQDIVNQVLDEIGIEISGKMAHAPSAARKTPSAATAKADGISDEDIERQLKALGV 213          
BLAST of EY756490 vs. ExPASy Swiss-Prot
Match: CHM2B_CHICK (Charged multivesicular body protein 2b OS=Gallus gallus GN=CHMP2B PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.153e-25
Identity = 62/208 (29.81%), Postives = 117/208 (56.25%), Query Frame = 3
Query:   66 KKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGK--IASKNTEDASSSGIDELEKRLAALRI 683
            KK    + ++E  RE++   R + ++  AL+++E++L  EIK+ AKTGN+ A K+LA+QL++LR+Q        +++  ++T T+ M++   +                +M+P K  + M+ FQK++ +M+MT EM++DT+                  QVLDEIG++++ +++ AP     + S +T  AS+   +E+E++L AL +
Sbjct:    6 KKKTVDDIIKEQNRELRGTQRTITRDRAALEKQERQLELEIKKMAKTGNKEACKVLAKQLVQLRKQKNRTYAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDASDEEEESQDIVNQVLDEIGIEISGKMAKAPSAARGLPSASTSKASTISDEEIERQLKALGV 213          
BLAST of EY756490 vs. ExPASy Swiss-Prot
Match: CM2A2_DICDI (Charged multivesicular body protein 2a homolog 2 OS=Dictyostelium discoideum GN=chmp2a2 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.180e-25
Identity = 62/182 (34.07%), Postives = 98/182 (53.85%), Query Frame = 3
Query:   51 MNIFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAP 596
            M +F K+  PKE LRE++R +  + R +++E  ALQ +EKK++ +IK+ AK G   + KI+A+ L+R R  I      + Q++ ++   Q + +  ++                QM   +  K+M EF++QS +MDM  EMM+DT+                  QVLDEIG+D+ASQL  AP
Sbjct:    1 MFLFGKQKTPKEVLRENQRNLNKSMREIDRERVALQNQEKKIILDIKKMAKQGQMNSAKIMAKDLVRTRYHIQKFYEMKTQLQAVSLRIQTLQSTQAMAEAMKGVTKAMITMNRQMNLPQFTKIMMEFEQQSDKMDMKEEMMNDTMDQVMEQDGEEEQSQEILNQVLDEIGIDLASQLVDAP 182          
BLAST of EY756490 vs. ExPASy Swiss-Prot
Match: CHM2B_PONAB (Charged multivesicular body protein 2b OS=Pongo abelii GN=CHMP2B PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.302e-24
Identity = 62/208 (29.81%), Postives = 115/208 (55.29%), Query Frame = 3
Query:   66 KKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKG--KIASKNTEDASSSGIDELEKRLAALRI 683
            KK    + ++E  RE++   R + ++  AL+++EK+L  EIK+ AK GN+ A K+LA+QL+ LR+Q        +++  ++T T+ M++   +                +M+P K  + M+ FQK++ +M+MT EM++DT+                  QVLDEIG++++ +++ AP     + S +T  A+ S  +E+E++L AL +
Sbjct:    6 KKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAARSLPSASTSKATISD-EEIERQLKALGV 212          
BLAST of EY756490 vs. ExPASy Swiss-Prot
Match: CHM2B_HUMAN (Charged multivesicular body protein 2b OS=Homo sapiens GN=CHMP2B PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.302e-24
Identity = 62/208 (29.81%), Postives = 115/208 (55.29%), Query Frame = 3
Query:   66 KKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKG--KIASKNTEDASSSGIDELEKRLAALRI 683
            KK    + ++E  RE++   R + ++  AL+++EK+L  EIK+ AK GN+ A K+LA+QL+ LR+Q        +++  ++T T+ M++   +                +M+P K  + M+ FQK++ +M+MT EM++DT+                  QVLDEIG++++ +++ AP     + S +T  A+ S  +E+E++L AL +
Sbjct:    6 KKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAARSLPSASTSKATISD-EEIERQLKALGV 212          
The following BLAST results are available for this feature:
BLAST of EY756490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
VPS2C_ARATH3.499e-7672.38Vacuolar protein sorting-associated protein 2 homo... [more]
VPS2B_ARATH7.084e-6159.09Vacuolar protein sorting-associated protein 2 homo... [more]
VPS2A_ARATH4.634e-2835.00Vacuolar protein sorting-associated protein 2 homo... [more]
CH2BB_XENLA4.338e-2630.29Charged multivesicular body protein 2b-B OS=Xenopu... [more]
CHM2B_XENTR1.262e-2529.81Charged multivesicular body protein 2b OS=Xenopus ... [more]
CHM2B_DANRE1.648e-2529.11Charged multivesicular body protein 2b OS=Danio re... [more]
CHM2B_CHICK2.153e-2529.81Charged multivesicular body protein 2b OS=Gallus g... [more]
CM2A2_DICDI8.180e-2534.07Charged multivesicular body protein 2a homolog 2 O... [more]
CHM2B_PONAB5.302e-2429.81Charged multivesicular body protein 2b OS=Pongo ab... [more]
CHM2B_HUMAN5.302e-2429.81Charged multivesicular body protein 2b OS=Homo sap... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-B12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756490 ID=EY756490; Name=EY756490; organism=Citrus sinensis; type=EST; length=846bp
CCACGCGTCCGAATTATTCAAATTCACAACAACATCGAAACAAAAAAAAA
ATGAACATCTTTTCCAAAAAGCCAAACCCTAAAGAGGCTCTTCGAGAGAG
CAAGAGAGAAATGCAGCACGCTACTAGAGGCATGGAGAAGGAAATTGGAG
CACTACAACAAGAAGAAAAGAAGCTTGTTGCTGAGATAAAAAGAACCGCT
AAAACAGGAAATGAGGGTGCTACTAAAATTCTGGCCCGGCAGCTGATCAG
ACTGAGGCAGCAAATAGCTAACTTACAGGGTAGTCGAGCTCAAATAAGAG
GCATAGCTACTCACACACAGGCTATGCATGCACATTCTTCAGTTGCTGTT
GGCATGAAAGGAGCCAGTAAGGCAATGGCAGCCATGAATAAGCAAATGGA
ACCTGCGAAGCAAGCCAAGGTTATGCGGGAATTCCAGAAGCAATCAGCAC
AGATGGATATGACTACTGAAATGATGTCCGATACCATTGATGATGCCTTG
GACAATGATGAGGCTGAAGAGGAAACTGAAGAGCTGACAAATCAGGTGCT
AGATGAAATTGGTGTTGATGTTGCCTCACAGCTGTCAGCAGCTCCAAAAG
GTAAAATCGCCAGTAAAAACACGGAAGATGCCAGCAGTTCGGGCATTGAC
GAGCTTGAGAAGCGGTTGGCGGCTCTCAGAATCCATGAGTTTTTGCAGTT
TCCTCTTCAAACACCCTTTTTTTTATAATAAATTTTTTTTACAATATCTT
TTTANGTGTAATCGANGTGATCCTCCCTACTACAGTTCGAACCCCTGNTA
GATTGCACTGTNCATATATCCCATTTTGATGATAAAAAAAAAAAAA
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