EY756484

Overview
NameEY756484
Unique NameEY756484
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length605
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3300 contig Csv1_Contig3300:217..820. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP_PYRCO (Non-specific lipid-transfer protein OS=Pyrus communis PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.160e-27
Identity = 44/78 (56.41%), Postives = 60/78 (76.92%), Query Frame = 2
Query:  128 IVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKVR 361
            I Y+RSGG +P  CCNG++++N  A+TTPDRQ ACNCLK  AGS+  +NP NA  LP  CGV++PYKI+ S++C+ V+
Sbjct:   38 INYVRSGGAVPPACCNGIKTINGLAKTTPDRQAACNCLKNLAGSVSGVNPGNAESLPGKCGVNVPYKISTSTNCATVK 115          

HSP 2 Score: 36.1946 bits (82), Expect = 3.160e-27
Identity = 19/43 (44.19%), Postives = 25/43 (58.14%), Query Frame = 1
Query:   19 AALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCNRLLEIG 147
            A +KL   + LCM V+    A AITC QV+ +LAPC   +  G
Sbjct:    5 AVIKLALVVALCMAVS---VAHAITCSQVSANLAPCINYVRSG 44          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP_HELAN (Non-specific lipid-transfer protein OS=Helianthus annuus PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 9.080e-27
Identity = 48/78 (61.54%), Postives = 57/78 (73.08%), Query Frame = 2
Query:  128 IVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKVR 361
            I YL  GG +P  CC+GV+SLN+AA+TTPDRQ AC CLK A  SI  +N  NA   P  CGVSIPYKI+ S+DCSKV+
Sbjct:   39 ISYLTKGGAVPPACCSGVKSLNSAAKTTPDRQAACGCLKSAYNSISGVNAGNAASFPGKCGVSIPYKISPSTDCSKVQ 116          

HSP 2 Score: 36.965 bits (84), Expect = 9.080e-27
Identity = 19/42 (45.24%), Postives = 28/42 (66.67%), Query Frame = 1
Query:   22 ALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCNRLLEIG 147
            A+ ++ A V CM+V  P + +A++CGQV+ SLAPC   L  G
Sbjct:    5 AMMVLCAGVTCMVVGAPYT-EALSCGQVSSSLAPCISYLTKG 45          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP2_BRANA (Non-specific lipid-transfer protein 2 OS=Brassica napus GN=LTP2 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.493e-26
Identity = 47/78 (60.26%), Postives = 55/78 (70.51%), Query Frame = 2
Query:  128 IVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKVR 361
            I YL   GP+P  CC GV +LN  ARTTPDRQ AC CL  AA S P LN   A GLP+ACGV+IPYKI+ S++C+ VR
Sbjct:   40 IGYLTQNGPLPRGCCTGVTNLNNMARTTPDRQQACRCLVGAANSFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117          

HSP 2 Score: 38.5058 bits (88), Expect = 7.493e-26
Identity = 19/39 (48.72%), Postives = 29/39 (74.36%), Query Frame = 1
Query:   16 MAALKLVSALVL-CMLVTGPLSAQA-ITCGQVTGSLAPC 126
            MA L  ++ LVL CM+V GP+++ A ++CG V+G +APC
Sbjct:    1 MAGLMKLACLVLACMIVAGPITSNAALSCGTVSGYVAPC 39          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: LTP1_MORNI (Non-specific lipid-transfer protein 1 OS=Morus nigra PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 9.755e-26
Identity = 51/78 (65.38%), Postives = 58/78 (74.36%), Query Frame = 2
Query:  128 IVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKVR 361
            I YLR+GG +P  CCNGVRSLN AA+TT DRQ ACNCLK A  SI  LN N A GLP  CGVS+PYKI+ S+DC  V+
Sbjct:   14 INYLRAGGVVPANCCNGVRSLNNAAKTTADRQAACNCLKSAFNSIKGLNLNLAAGLPGKCGVSVPYKISPSTDCKSVK 91          

HSP 2 Score: 30.4166 bits (67), Expect = 9.755e-26
Identity = 13/20 (65.00%), Postives = 14/20 (70.00%), Query Frame = 1
Query:   88 ITCGQVTGSLAPCNRLLEIG 147
            ITCGQV+ SLAPC   L  G
Sbjct:    1 ITCGQVSSSLAPCINYLRAG 20          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTPB_BRAOT (Non-specific lipid-transfer protein B OS=Brassica oleracea var. italica GN=WAX9B PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.755e-26
Identity = 47/78 (60.26%), Postives = 55/78 (70.51%), Query Frame = 2
Query:  128 IVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKVR 361
            I YL   GP+P  CC GV +LN  ARTTPDRQ AC CL  AA S P LN   A GLP+ACGV+IPYKI+ S++C+ VR
Sbjct:   40 IGYLTQNGPLPRGCCTGVTNLNNMARTTPDRQQACRCLVGAANSFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117          

HSP 2 Score: 38.1206 bits (87), Expect = 9.755e-26
Identity = 20/39 (51.28%), Postives = 28/39 (71.79%), Query Frame = 1
Query:   16 MAALKLVSALVL-CMLVTGPLSAQA-ITCGQVTGSLAPC 126
            MA L  +S LVL CM+V GP++  A ++CG V+G+LA C
Sbjct:    1 MAGLVKLSCLVLACMIVAGPIATNAALSCGTVSGNLAAC 39          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP_CICAR (Non-specific lipid-transfer protein OS=Cicer arietinum PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 9.755e-26
Identity = 47/73 (64.38%), Postives = 55/73 (75.34%), Query Frame = 2
Query:  146 GGPIP-VPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKVR 361
            GGP P   CC GVR+LN+AA TTPDRQ ACNCLK AAGSI  LN NNA  LP  C V+IPYKI+ S++C+ +R
Sbjct:   43 GGPGPSAQCCGGVRNLNSAAVTTPDRQAACNCLKSAAGSISRLNANNAAALPGKCVVNIPYKISTSTNCATIR 115          

HSP 2 Score: 40.0466 bits (92), Expect = 9.755e-26
Identity = 18/44 (40.91%), Postives = 29/44 (65.91%), Query Frame = 1
Query:   16 MAALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCNRLLEIG 147
            MA++K+V   ++  +V  P++  AITCG+V  +LAPC   L+ G
Sbjct:    1 MASMKVVCVALIMCIVIAPMAESAITCGRVDTALAPCLGYLQGG 44          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP3_BRANA (Non-specific lipid-transfer protein 3 OS=Brassica napus GN=LTP3 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.270e-25
Identity = 44/78 (56.41%), Postives = 57/78 (73.08%), Query Frame = 2
Query:  128 IVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKVR 361
            I YL   GP+P  CC+GV SLN  ARTTPDRQ AC CL  AA ++P +N   A GLP+ACGV+IPYKI+ +++C+ V+
Sbjct:   40 IGYLTQNGPVPTACCSGVTSLNNMARTTPDRQQACRCLVGAANALPTINVARAAGLPKACGVNIPYKISKTTNCNSVK 117          

HSP 2 Score: 38.1206 bits (87), Expect = 1.270e-25
Identity = 20/39 (51.28%), Postives = 28/39 (71.79%), Query Frame = 1
Query:   16 MAALKLVSALVL-CMLVTGPLSAQA-ITCGQVTGSLAPC 126
            MA L  +S LVL CM+V GP++  A ++CG V+G+LA C
Sbjct:    1 MAGLVKLSCLVLACMIVAGPIATNAALSCGTVSGNLAAC 39          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP1_BRANA (Non-specific lipid-transfer protein 1 OS=Brassica napus GN=LTP1 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.152e-25
Identity = 46/78 (58.97%), Postives = 55/78 (70.51%), Query Frame = 2
Query:  128 IVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKVR 361
            I YL   GP+P  CC GV +LN  ARTTPDRQ AC CL  AA + P LN   A GLP+ACGV+IPYKI+ S++C+ VR
Sbjct:   40 IGYLTQNGPLPRGCCTGVTNLNNMARTTPDRQQACRCLVGAANAFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117          

HSP 2 Score: 38.1206 bits (87), Expect = 2.152e-25
Identity = 20/39 (51.28%), Postives = 28/39 (71.79%), Query Frame = 1
Query:   16 MAALKLVSALVL-CMLVTGPLSAQA-ITCGQVTGSLAPC 126
            MA L  +S LVL CM+V GP++  A ++CG V+G+LA C
Sbjct:    1 MAGLVKLSCLVLACMIVAGPIATNAALSCGTVSGNLAAC 39          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP1_TOBAC (Non-specific lipid-transfer protein 1 OS=Nicotiana tabacum GN=LTP1 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.801e-25
Identity = 45/78 (57.69%), Postives = 57/78 (73.08%), Query Frame = 2
Query:  128 IVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKVR 361
            + YLR+ GP+   CC GV++L  +ARTT DRQ AC CLK AAG+I  +N   A GLP  CGV+IPYKI+ S+DCSKV+
Sbjct:   38 LAYLRNTGPLG-RCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKVQ 114          

HSP 2 Score: 42.743 bits (99), Expect = 2.801e-25
Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 1
Query:   28 KLVSALVLCMLVTGPLSAQAITCGQVTGSLAPC 126
            K+   +VLCM+V  P  A+AITCGQVT +LAPC
Sbjct:    6 KIACFVVLCMVVAAPC-AEAITCGQVTSNLAPC 37          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP_MALDO (Non-specific lipid-transfer protein OS=Malus domestica GN=MALD3 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.557e-25
Identity = 49/78 (62.82%), Postives = 62/78 (79.49%), Query Frame = 2
Query:  128 IVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKVR 361
            I Y+RSGG +P  CCNG+R++N  ARTT DRQTACNCLK  AGSI  +NPNNA GLP  CGV++PYKI+ S++C+ V+
Sbjct:   38 IGYVRSGGAVPPACCNGIRTINGLARTTADRQTACNCLKNLAGSISGVNPNNAAGLPGKCGVNVPYKISTSTNCATVK 115          
The following BLAST results are available for this feature:
BLAST of EY756484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
NLTP_PYRCO3.160e-2756.41Non-specific lipid-transfer protein OS=Pyrus commu... [more]
NLTP_HELAN9.080e-2761.54Non-specific lipid-transfer protein OS=Helianthus ... [more]
NLTP2_BRANA7.493e-2660.26Non-specific lipid-transfer protein 2 OS=Brassica ... [more]
LTP1_MORNI9.755e-2665.38Non-specific lipid-transfer protein 1 OS=Morus nig... [more]
NLTPB_BRAOT9.755e-2660.26Non-specific lipid-transfer protein B OS=Brassica ... [more]
NLTP_CICAR9.755e-2664.38Non-specific lipid-transfer protein OS=Cicer ariet... [more]
NLTP3_BRANA1.270e-2556.41Non-specific lipid-transfer protein 3 OS=Brassica ... [more]
NLTP1_BRANA2.152e-2558.97Non-specific lipid-transfer protein 1 OS=Brassica ... [more]
NLTP1_TOBAC2.801e-2557.69Non-specific lipid-transfer protein 1 OS=Nicotiana... [more]
NLTP_MALDO4.557e-2562.82Non-specific lipid-transfer protein OS=Malus domes... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-B05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756484 ID=EY756484; Name=EY756484; organism=Citrus sinensis; type=EST; length=605bp
CCACGCGTCCGATAAATGGCTGCCCTCAAGCTTGTTTCAGCTTTGGTTCT
GTGCATGTTGGTGACTGGTCCCCTGAGTGCTCAAGCCATAACATGTGGGC
AGGTGACTGGCTCATTGGCACCATGCAATCGTTTACTTGAGATCGGGCGG
CCCTATACCTGTGCCGTGCTGCAACGGCGTCAGGTCTCTCAACGCTGCCG
CCAGAACCACACCTGACCGCCAAACTGCATGCAACTGCTTGAAGCAAGCC
GCCGGATCAATCCCTAACCTCAACCCTAATAATGCTGTTGGTCTTCCACG
AGCTTGTGGAGTCAGCATTCCTTACAAGATCACCATCTCCAGTGACTGCT
CTAAGGTCCGGTGAACAGGAATCTGGGCTGTTGATTTTCATATTTAAGTT
GACGGAGTACAATAAATGTATAATAATAAGGACATTTTTGTGTCCGAATT
ATGAGTCTCTCTCTACACTTTGTACTGCGAGTCTCGTTCCCGCCCTCGTT
TCATGTTGTGTCTTATTGTCTTTGCTTTTCATGTCATCGTCAGTTTGTGT
CTATTCTGTTTATTACATGAAATCTTGCCTTGTGTTCAAAAAAAAAAAAA
AAAAA
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