EY756483

Overview
NameEY756483
Unique NameEY756483
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length684
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7982 contig Csv1_Contig7982:361..1045. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756483 vs. ExPASy Swiss-Prot
Match: BI1L_ARATH (BI1-like protein OS=Arabidopsis thaliana GN=At4g15470 PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.492e-57
Identity = 112/150 (74.67%), Postives = 122/150 (81.33%), Query Frame = 2
Query:   14 HQKHPVNLIVLGLFTVSLSLPVAVSCANTDGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXXMQMFFPLGSTSTAVYGGISALVFCGYIVYDTDNLIKRFTYDDYILASVTLYLDILNLFISILRVLRSSD 463
            HQKHPVNLI+L LFTVSLS  V VSCA T+GRIVL+ALILT +VV SLT YTFWA+KKGKDFSFLGP              +QMFFPLG TS AVYGG SALVFCGYIVYDTDNLIKRFTYD+YILASV LYLDILNLF++ILR+LR  D
Sbjct:  106 HQKHPVNLILLALFTVSLSFTVGVSCAMTEGRIVLQALILTLSVVGSLTAYTFWAAKKGKDFSFLGPILFTSLIILVVTSFIQMFFPLGPTSVAVYGGFSALVFCGYIVYDTDNLIKRFTYDEYILASVALYLDILNLFLTILRILRQGD 255          
BLAST of EY756483 vs. ExPASy Swiss-Prot
Match: TMBI4_MOUSE (Transmembrane BAX inhibitor motif-containing protein 4 OS=Mus musculus GN=Tmbim4 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.489e-20
Identity = 53/145 (36.55%), Postives = 86/145 (59.31%), Query Frame = 2
Query:   23 HPVNLIVLGLFTVSLSLPVAVSCANTDGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXXMQMFFPLGSTSTAVYGGISALVFCGYIVYDTDNLIKRFTYDDYILASVTLYLDILNLFISILRVLRS 457
            HP+NL +L  FT+S SL VA      D  +VL+A I+T+AV   LT YT  + +   DF+  G               +++FF    T   V   + AL+FCG+I+YDT +L+ R + ++Y++A+++LY+DI+NLF+ +L+ L +
Sbjct:   94 HPLNLYLLFAFTLSESLAVAAVVTFYDVYLVLQAFIMTTAVFLGLTAYTLQSKR---DFTKFGAGLFAGLWILCLAGFLKLFF-YSETMELVLASLGALLFCGFIIYDTHSLMHRLSPEEYVIAAISLYMDIINLFLHLLKFLEA 234          
BLAST of EY756483 vs. ExPASy Swiss-Prot
Match: TMBI4_HUMAN (Transmembrane BAX inhibitor motif-containing protein 4 OS=Homo sapiens GN=TMBIM4 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.046e-18
Identity = 55/149 (36.91%), Postives = 84/149 (56.38%), Query Frame = 2
Query:   11 DHQKHPVNLIVLGLFTVSLSLPVAVSCANTDGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXXMQMFFPLGSTSTAVYGGISALVFCGYIVYDTDNLIKRFTYDDYILASVTLYLDILNLFISILRVLRS 457
            +  K+P+NL +L  FT+  +L VAV     D  I+L+A ILT+ V   LT YT  + K   DFS  G               ++ FF        V     AL+FCG+I+YDT +L+ + + ++Y+LA+++LYLDI+NLF+ +LR L +
Sbjct:   90 NRHKYPLNLYLLFGFTLLEALTVAVVVTFYDVYIILQAFILTTTVFFGLTVYTLQSKK---DFSKFGAGLFALLWILCLSGFLKFFF-YSEIMELVLAAAGALLFCGFIIYDTHSLMHKLSPEEYVLAAISLYLDIINLFLHLLRFLEA 234          
BLAST of EY756483 vs. ExPASy Swiss-Prot
Match: YQE4_SCHPO (Uncharacterized membrane protein C576.04 OS=Schizosaccharomyces pombe GN=SPCC576.04 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.510e-17
Identity = 51/143 (35.66%), Postives = 77/143 (53.85%), Query Frame = 2
Query:   23 HPVNLIVLGLFTVSLSLPVAVSCANTDGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXXMQMFFPLGSTSTAVYGGISALVFCGYIVYDTDNLIKRFTYDDYILASVTLYLDILNLFISILRVL 451
            +P N I L LFT    L +  +      RI+LEA+ +T  V  +LT +TF +     DFS LG               +  F P        + G   LVFCGYI++DT N++ R++ +++I++S+ LYLD +NLFI IL++L
Sbjct:  118 YPRNYIFLFLFTALEGLTLGTAITFFSARIILEAVFITLGVFVALTAFTFQSKW---DFSRLGGFLYVSLWSLILTPLIFFFVPSTPFIDMAFAGFGTLVFCGYILFDTYNILHRYSPEEFIMSSLMLYLDFINLFIRILQIL 257          
BLAST of EY756483 vs. ExPASy Swiss-Prot
Match: TMBI4_CAEEL (Transmembrane BAX inhibitor motif-containing protein 4 OS=Caenorhabditis elegans GN=tmbi-4 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.323e-13
Identity = 48/146 (32.88%), Postives = 75/146 (51.37%), Query Frame = 2
Query:   26 PVNLIVLGLFTVSLSLPVAVSCANTDGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXXMQMFFPLGSTSTAVYGGISALVFCGYIVYDTDNLIKRFTYDDYILASVTLYLDILNLFISILRVLRSSD 463
            P+N ++L  FT   ++ +       + ++VLEA ++T  VV SL  YT    +  +DFS                   QMFF +      V     A +FC  +V D D ++ RF+ +DYI A V+LY+DILNLFI IL+++  ++
Sbjct:  134 PLNYVLLAAFTAVQAVTMGCVVTLFEAKVVLEAAVITGLVVASLFAYTL---QNKRDFSVGYASMGSLLCVLLWAGIFQMFF-MSPAVNFVINVFGAGLFCVLLVIDLDMIMYRFSPEDYICACVSLYMDILNLFIRILQIVAEAN 275          
BLAST of EY756483 vs. ExPASy Swiss-Prot
Match: Y236_CAMJE (Uncharacterized protein Cj0236c OS=Campylobacter jejuni GN=Cj0236c PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12
Identity = 47/149 (31.54%), Postives = 76/149 (51.01%), Query Frame = 2
Query:   26 PVNLIVLGLFTVSLSLP-----VAVSCANTDGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXXMQMFFPLGSTSTAVYGGISALVFCGYIVYDTDNLIKRFTYDDYILASVTLYLDILNLFISILRVLRS 457
            P+NL++L  FT    L      ++V      G I+ +A  LT+    +  G + +A    KDF+ +G               + +FF     + A+   ++A++F  YI+YDT N+I R  Y+  I  +V LYLD +NLF+S+L +LRS
Sbjct:   84 PLNLVLLFGFTFCSGLTLTPLLISVLALPAGGIIIAQAFALTTV---AFAGLSVFAMNTKKDFTVMGKALFIVLIVIVAASLLNLFFQSSIVNLAI-SAVAAILFSFYILYDTQNII-RGNYETPIEGAVALYLDFVNLFVSLLNILRS 227          
The following BLAST results are available for this feature:
BLAST of EY756483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
BI1L_ARATH1.492e-5774.67BI1-like protein OS=Arabidopsis thaliana GN=At4g15... [more]
TMBI4_MOUSE2.489e-2036.55Transmembrane BAX inhibitor motif-containing prote... [more]
TMBI4_HUMAN1.046e-1836.91Transmembrane BAX inhibitor motif-containing prote... [more]
YQE4_SCHPO1.510e-1735.66Uncharacterized membrane protein C576.04 OS=Schizo... [more]
TMBI4_CAEEL1.323e-1332.88Transmembrane BAX inhibitor motif-containing prote... [more]
Y236_CAMJE9.479e-1231.54Uncharacterized protein Cj0236c OS=Campylobacter j... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-B04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756483 ID=EY756483; Name=EY756483; organism=Citrus sinensis; type=EST; length=684bp
CCACGCGTCCGATCATCAGAAGCACCCTGTGAACTTGATTGTCCTTGGTC
TCTTCACTGTATCTCTGAGTCTTCCTGTTGCTGTAAGCTGCGCTAATACT
GATGGTAGGATTGTGCTTGAAGCATTAATTCTGACCTCGGCTGTGGTTTG
TTCTTTAACTGGGTACACTTTCTGGGCCTCTAAGAAGGGCAAAGATTTCA
GCTTTCTTGGACCAATTCTATTCACCAGCCTCATAATCCTCATTCTGACT
AGCTTTATGCAGATGTTCTTTCCTCTGGGATCTACGTCCACTGCTGTTTA
TGGTGGAATTAGTGCACTGGTCTTCTGTGGATACATCGTTTACGACACTG
ACAACTTGATCAAGCGCTTCACATATGATGATTATATTTTGGCCTCTGTC
ACTCTCTATCTGGATATTCTGAACCTTTTCATCTCCATTTTGCGGGTGCT
GAGATCATCAGATGGTTAGTTGTACAGTGGTCTACCACAAGACGTAAATC
TTTGTGGAATCACCTTATGGTGCTCAGTTTGTGTTTGGCTACACCTGAAA
CTAAGTTCTGAAACAATGTTATTGAAGATATAATACATCTTCTGATCATG
TACTCATTAATCAATGACCCTCCAAGATTTCTTGGTCTTCCATTTCCTGA
ATTNAGTGTGGTAATAGATATATTATTGGTATCT
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