EY756474
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PRS6B_ARATH (26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 475.322 bits (1222), Expect = 2.104e-133 Identity = 240/246 (97.56%), Postives = 241/246 (97.97%), Query Frame = 2 Query: 14 DIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPXXL*KGYRTNVKKPDTDFEF 751 DIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCT+KMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILP KGYR NVKKPDTDFEF Sbjct: 161 DIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRANVKKPDTDFEF 406
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PRS6B_SOLTU (26S protease regulatory subunit 6B homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 473.396 bits (1217), Expect = 7.997e-133 Identity = 239/246 (97.15%), Postives = 240/246 (97.56%), Query Frame = 2 Query: 14 DIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPXXL*KGYRTNVKKPDTDFEF 751 DIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVA+HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNL DEVDLEDYVSRPDKISAAEI AICQEAGMHAVRKNRYVILP KGYRTNVKKPDTDFEF Sbjct: 166 DIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEF 411
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PRS6B_DICDI (26S protease regulatory subunit 6B homolog OS=Dictyostelium discoideum GN=psmC4 PE=1 SV=1) HSP 1 Score: 433.335 bits (1113), Expect = 9.171e-121 Identity = 214/247 (86.64%), Postives = 231/247 (93.52%), Query Frame = 2 Query: 11 GDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPXXL*KGYRTNVKKPDTDFEF 751 GDIQKQE+REAVELPLTHH LYKQIGIDPPRGVLLYGPPGTGKTMLAKAVA+HT+AAFIRVVGSEFVQKYLGEGPR+VRDVFRLA+EN+PAIIFIDE+DAIAT RFDAQTGADREVQRILMELLNQMDGFD +VNVKVIMATNR DTLDPALLRPGRLDRKIEFPLPDRRQKRL+FQV T+KMNLSDEVDLEDYVSRPDK+S AEI +ICQEAGMHA+RKNRYVILP KGY+ ++KK +F F Sbjct: 155 GDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEAGMHAIRKNRYVILPKDFEKGYKASIKKNTHEFNF 401
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PRS6B_MANSE (26S protease regulatory subunit 6B OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 419.083 bits (1076), Expect = 1.790e-116 Identity = 204/246 (82.93%), Postives = 229/246 (93.09%), Query Frame = 2 Query: 14 DIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPXXL*KGYRTNVKKPDTDFEF 751 D QKQEIREAVELPLTH ELY+QIGI+PPRGVL+YGPPG GKTMLA AVA+HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN+PAIIFIDE+DAIAT RFDAQTGADREVQRIL+ELLNQMDGFDQT NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+F TAKMNLS+EVDLE++V+RPD++S A+I AICQEAGM+AVR+NRY++LP KGY+ N+KK ++++EF Sbjct: 168 DTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLANAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITAKMNLSEEVDLEEFVARPDRVSGADINAICQEAGMNAVRENRYIVLPKDFEKGYKNNIKKDESEYEF 413
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PRS6B_RAT (26S protease regulatory subunit 6B OS=Rattus norvegicus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 417.157 bits (1071), Expect = 6.801e-116 Identity = 207/246 (84.15%), Postives = 226/246 (91.87%), Query Frame = 2 Query: 14 DIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPXXL*KGYRTNVKKPDTDFEF 751 DIQKQE+REAVELPLTH ELYKQIGIDPPRGVL+YGPPG GKTMLAKAVA+HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDE+DAIAT RFDAQTGADREVQRIL+ELLNQMDGFDQ VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+F T+KMNLS+EVDLEDYV+RPDKIS A+I +ICQE+GM AVR+NRY++L K Y+T +KK + + EF Sbjct: 171 DIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEF 416
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PRS6B_MACFA (26S protease regulatory subunit 6B OS=Macaca fascicularis GN=PSMC4 PE=2 SV=1) HSP 1 Score: 417.157 bits (1071), Expect = 6.801e-116 Identity = 207/246 (84.15%), Postives = 226/246 (91.87%), Query Frame = 2 Query: 14 DIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPXXL*KGYRTNVKKPDTDFEF 751 DIQKQE+REAVELPLTH ELYKQIGIDPPRGVL+YGPPG GKTMLAKAVA+HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDE+DAIAT RFDAQTGADREVQRIL+ELLNQMDGFDQ VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+F T+KMNLS+EVDLEDYV+RPDKIS A+I +ICQE+GM AVR+NRY++L K Y+T +KK + + EF Sbjct: 171 DIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEF 416
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PRS6B_HUMAN (26S protease regulatory subunit 6B OS=Homo sapiens GN=PSMC4 PE=1 SV=2) HSP 1 Score: 417.157 bits (1071), Expect = 6.801e-116 Identity = 207/246 (84.15%), Postives = 226/246 (91.87%), Query Frame = 2 Query: 14 DIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPXXL*KGYRTNVKKPDTDFEF 751 DIQKQE+REAVELPLTH ELYKQIGIDPPRGVL+YGPPG GKTMLAKAVA+HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDE+DAIAT RFDAQTGADREVQRIL+ELLNQMDGFDQ VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+F T+KMNLS+EVDLEDYV+RPDKIS A+I +ICQE+GM AVR+NRY++L K Y+T +KK + + EF Sbjct: 171 DIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEF 416
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PRS6B_BOVIN (26S protease regulatory subunit 6B OS=Bos taurus GN=PSMC4 PE=2 SV=1) HSP 1 Score: 417.157 bits (1071), Expect = 6.801e-116 Identity = 207/246 (84.15%), Postives = 226/246 (91.87%), Query Frame = 2 Query: 14 DIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPXXL*KGYRTNVKKPDTDFEF 751 DIQKQE+REAVELPLTH ELYKQIGIDPPRGVL+YGPPG GKTMLAKAVA+HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDE+DAIAT RFDAQTGADREVQRIL+ELLNQMDGFDQ VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+F T+KMNLS+EVDLEDYV+RPDKIS A+I +ICQE+GM AVR+NRY++L K Y+T +KK + + EF Sbjct: 171 DIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEF 416
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PRS6B_MOUSE (26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 409.453 bits (1051), Expect = 1.418e-113 Identity = 204/246 (82.93%), Postives = 222/246 (90.24%), Query Frame = 2 Query: 14 DIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPXXL*KGYRTNVKKPDTDFEF 751 DIQKQE+REAVELPLTH ELYKQIGIDPPRGVL+YGPPG GKTMLAKAVA+HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDE+DAIAT RFDAQTGADREVQRIL+ELLNQMDGFDQ VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+F T+KMNLS+EVDLEDYV+RPDKIS A+I +ICQ GM AVR+ Y++L K Y+T +KK + + EF Sbjct: 171 DIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQARGMLAVRETAYIVLAKDFEKAYKTVIKKDEQEHEF 416
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PRS6B_CAEEL (Probable 26S protease regulatory subunit 6B OS=Caenorhabditis elegans GN=rpt-3 PE=2 SV=1) HSP 1 Score: 403.29 bits (1035), Expect = 1.016e-111 Identity = 201/246 (81.71%), Postives = 222/246 (90.24%), Query Frame = 2 Query: 14 DIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPXXL*KGYRTNVKKPDTDFEF 751 D+QKQE+REAVELPLTH ELY+QIGIDPPRGVL+YGPPG GKTMLAKAVA +T A+FIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN+P+IIFIDE+DAIAT RFDAQTGADREVQRIL+ELLNQMDGFDQ+ NVKVIMATNR DTLDPALLRPGRLDRKIEFPLPDRRQKRLVF ++MNLSD+VDLED+V+RPDKIS A+I +ICQEAGM AVR+NRYV+L L K Y+ VKK DFEF Sbjct: 167 DMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEKAYKNVVKKDTNDFEF 412 The following BLAST results are available for this feature:
BLAST of EY756474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 383
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756474 ID=EY756474; Name=EY756474; organism=Citrus sinensis; type=EST; length=926bpback to top |