EY756466
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY756466 vs. ExPASy Swiss-Prot
Match: PTBP2_ARATH (Polypyrimidine tract-binding protein homolog 2 OS=Arabidopsis thaliana GN=At5g53180 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.248e-29 Identity = 67/93 (72.04%), Postives = 74/93 (79.57%), Query Frame = 3 Query: 12 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPV--PMVGATANQYNGA 284 NGG+QALIQY DVQTAVVAKEALEGHCIYDGGFCKLHI+YSRHTDLSIKVNNDRSRDYT+P+ P+ + QQPV P G QY+ A Sbjct: 281 NGGVQALIQYSDVQTAVVAKEALEGHCIYDGGFCKLHITYSRHTDLSIKVNNDRSRDYTMPNPPVP------MPQQPVQNPYAG-NPQQYHAA 366
BLAST of EY756466 vs. ExPASy Swiss-Prot
Match: PTBP1_ARATH (Polypyrimidine tract-binding protein homolog 1 OS=Arabidopsis thaliana GN=PTB PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.012e-22 Identity = 49/79 (62.03%), Postives = 62/79 (78.48%), Query Frame = 3 Query: 12 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ--PSILGQQP 242 NG QALIQY D+ TA +AKEALEGHCIYDGG+CKL +SYSRHTDL++K +D+SRDYTLP ++ +Q P++ G P Sbjct: 280 NGSTQALIQYSDIPTAAMAKEALEGHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDLSLLVAQKGPAVSGSAP 358
BLAST of EY756466 vs. ExPASy Swiss-Prot
Match: PTBP1_PIG (Polypyrimidine tract-binding protein 1 OS=Sus scrofa GN=PTBP1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.210e-11 Identity = 43/97 (44.33%), Postives = 57/97 (58.76%), Query Frame = 3 Query: 12 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGA----TANQYNGAQF 290 N QAL+QY D +A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P ++QPS L Q GA +A+ Y GA F Sbjct: 219 NNQFQALLQYADPVSAQHAKLSLDGQNIYNA-CCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPS-LDQTMAAAFGAPGIMSASPYAGAGF 313
BLAST of EY756466 vs. ExPASy Swiss-Prot
Match: PTBP1_RAT (Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus GN=Ptbp1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.805e-11 Identity = 43/95 (45.26%), Postives = 56/95 (58.95%), Query Frame = 3 Query: 12 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGA----TANQYNGA 284 N QAL+QY D +A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q GA +A+ Y GA Sbjct: 218 NNQFQALLQYADPVSAQHAKLSLDGQNIYNA-CCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQTMAAAFGAPGIMSASPYAGA 310
BLAST of EY756466 vs. ExPASy Swiss-Prot
Match: PTBP1_MOUSE (Polypyrimidine tract-binding protein 1 OS=Mus musculus GN=Ptbp1 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 8.887e-11 Identity = 40/91 (43.96%), Postives = 53/91 (58.24%), Query Frame = 3 Query: 12 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGA 284 N QAL+QY D +A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q G + +GA Sbjct: 218 NNQFQALLQYADPVSAQHAKLSLDGQNIYNA-CCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQTMAAAFGLSVPNVHGA 306
BLAST of EY756466 vs. ExPASy Swiss-Prot
Match: PTBP1_HUMAN (Polypyrimidine tract-binding protein 1 OS=Homo sapiens GN=PTBP1 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.887e-11 Identity = 40/91 (43.96%), Postives = 53/91 (58.24%), Query Frame = 3 Query: 12 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGA 284 N QAL+QY D +A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q G + +GA Sbjct: 219 NNQFQALLQYADPVSAQHAKLSLDGQNIYNA-CCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQTMAAAFGLSVPNVHGA 307
BLAST of EY756466 vs. ExPASy Swiss-Prot
Match: PTBP1_BOVIN (Polypyrimidine tract-binding protein 1 OS=Bos taurus GN=PTBP1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.887e-11 Identity = 40/91 (43.96%), Postives = 53/91 (58.24%), Query Frame = 3 Query: 12 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGA 284 N QAL+QY D +A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q G + +GA Sbjct: 219 NNQFQALLQYADPVSAQHAKLSLDGQNIYNA-CCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQTMAAAFGLSVPNVHGA 307 The following BLAST results are available for this feature:
BLAST of EY756466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY756466 ID=EY756466; Name=EY756466; organism=Citrus sinensis; type=EST; length=852bpback to top |