EY756462
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756462 vs. ExPASy Swiss-Prot
Match: RPN6_SCHPO (Probable 26S proteasome regulatory subunit rpn6 OS=Schizosaccharomyces pombe GN=rpn6 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.689e-41 Identity = 84/149 (56.38%), Postives = 106/149 (71.14%), Query Frame = 1 Query: 13 KAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDHGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKIM 459 K ++Y G +++AM+A+A AH RSL FE AL+D+K +L DPI+ HLSSLYD LLEQNL R++EP+SRVE++HIAELI L VE KLSQMILDK F G LD G GCLI++++P+ D Y A LE I NMG VVD L A + Sbjct: 272 KHAIRYAGRDIEAMRAIAQAHENRSLADFEKALQDYKPELASDPIIRSHLSSLYDNLLEQNLLRVVEPFSRVEVSHIAELIGLSTVQVEGKLSQMILDKIFYGILDQGSGCLIVYDEPQQDKTYEAALEVIKNMGTVVDLLIENKASAL 420
BLAST of EY756462 vs. ExPASy Swiss-Prot
Match: PSD11_MOUSE (26S proteasome non-ATPase regulatory subunit 11 OS=Mus musculus GN=Psmd11 PE=1 SV=3) HSP 1 Score: 167.933 bits (424), Expect = 4.916e-41 Identity = 85/148 (57.43%), Postives = 107/148 (72.30%), Query Frame = 1 Query: 13 KAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDHGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKI 456 K L+Y G + +A+K VA A RSL FE AL D++A+L +DPI+ HL+ LYD LLEQNL R+IEP+SRV+I HI+ LI+L VE+KLSQMILDKKF G LD G G LIIF++P D Y A LETI NM KVVDSL+ ++ K+ Sbjct: 274 KLALRYAGRQTEALKCVAQASKNRSLADFEKALTDYRAELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHISSLIKLSKADVERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYSKAKKL 421
BLAST of EY756462 vs. ExPASy Swiss-Prot
Match: PSD11_HUMAN (26S proteasome non-ATPase regulatory subunit 11 OS=Homo sapiens GN=PSMD11 PE=1 SV=3) HSP 1 Score: 167.548 bits (423), Expect = 6.420e-41 Identity = 85/148 (57.43%), Postives = 107/148 (72.30%), Query Frame = 1 Query: 13 KAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDHGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKI 456 K L+Y G + +A+K VA A RSL FE AL D++A+L +DPI+ HL+ LYD LLEQNL R+IEP+SRV+I HI+ LI+L VE+KLSQMILDKKF G LD G G LIIF++P D Y A LETI NM KVVDSL+ ++ K+ Sbjct: 274 KLALRYAGRQTEALKCVAQASKNRSLADFEKALTDYRAELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHISSLIKLSKADVERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYNKAKKL 421
BLAST of EY756462 vs. ExPASy Swiss-Prot
Match: PSD11_BOVIN (26S proteasome non-ATPase regulatory subunit 11 OS=Bos taurus GN=PSMD11 PE=2 SV=3) HSP 1 Score: 167.548 bits (423), Expect = 6.420e-41 Identity = 85/148 (57.43%), Postives = 107/148 (72.30%), Query Frame = 1 Query: 13 KAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDHGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKI 456 K L+Y G + +A+K VA A RSL FE AL D++A+L +DPI+ HL+ LYD LLEQNL R+IEP+SRV+I HI+ LI+L VE+KLSQMILDKKF G LD G G LIIF++P D Y A LETI NM KVVDSL+ ++ K+ Sbjct: 274 KLALRYAGRQTEALKCVAQASKNRSLADFEKALTDYRAELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHISSLIKLSKADVERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYNKAKKL 421
BLAST of EY756462 vs. ExPASy Swiss-Prot
Match: PSD11_DICDI (26S proteasome non-ATPase regulatory subunit 11 OS=Dictyostelium discoideum GN=psmD11 PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.697e-39 Identity = 77/149 (51.68%), Postives = 111/149 (74.50%), Query Frame = 1 Query: 13 KAGLQYVGPE-LDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDHGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKI 456 K GL+Y ++A+ ++ +H+KRSL +F+ ++F QL +DPI+H HL+ LY LLEQNLCR+IEP+SRVEI+HIA+LI+LP+D VE+KLS MILDKK+ G LD G G LI+FE+ K D ++ +LETI + +VVD L+ ++ K+ Sbjct: 264 KIGLKYHNNRSIEAITQISKSHAKRSLHMFQEVTKEFSDQLSDDPIIHSHLTELYSNLLEQNLCRIIEPFSRVEISHIAKLIDLPVDVVERKLSLMILDKKYNGILDQGTGTLIVFEEQKEDKLFNCSLETIGALSRVVDLLYEKTNKL 412
BLAST of EY756462 vs. ExPASy Swiss-Prot
Match: RPN6_YEAST (26S proteasome regulatory subunit RPN6 OS=Saccharomyces cerevisiae GN=RPN6 PE=1 SV=3) HSP 1 Score: 140.584 bits (353), Expect = 8.404e-33 Identity = 70/141 (49.65%), Postives = 96/141 (68.09%), Query Frame = 1 Query: 28 YVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDHGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSA 450 Y +DAMKAVA+A++ RSL F TAL+ ++ +L D + H ++LYDTLLE NLC++IEP+ VEI+HI+++I L VE KLSQMILDK F G LD G G L ++E P DA Y + LE + + KVVD LF +++ Sbjct: 291 YQSRGIDAMKAVAEAYNNRSLLDFNTALKQYEKELMGDELTRSHFNALYDTLLESNLCKIIEPFECVEISHISKIIGLDTQQVEGKLSQMILDKIFYGVLDQGNGWLYVYETPNQDATYDSALELVGQLNKVVDQLFEKAS 431
BLAST of EY756462 vs. ExPASy Swiss-Prot
Match: YMJ5_CAEEL (Uncharacterized protein F59B2.5 OS=Caenorhabditis elegans GN=F59B2.5 PE=2 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.644e-20 Identity = 54/139 (38.85%), Postives = 90/139 (64.75%), Query Frame = 1 Query: 37 PELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDHGVGCLIIFEDPKADAI--YPATLETISNMGKVVDSLFVRS 447 P + A++++ADA KRSLK F AL + K +L ED +V H +L +LE+ + R+IEPYS +E+++IA +I + + VE+ +++MILDKK G++D ++++ PKADA + +L+TI + K VD + R+ Sbjct: 328 PRIIAIRSMADAFRKRSLKDFVKALAEHKIELVEDKVVAVHSQNLERNMLEKEISRVIEPYSEIELSYIARVIGMTVPPVERAIARMILDKKLMGSIDQHGDTVVVY--PKADAANQFTRSLKTIRELTKTVDVSYSRT 464 The following BLAST results are available for this feature:
BLAST of EY756462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY756462 ID=EY756462; Name=EY756462; organism=Citrus sinensis; type=EST; length=730bpback to top |