EY756440

Overview
NameEY756440
Unique NameEY756440
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_SILLA (Histone H4 OS=Silene latifolia GN=SlH4 PE=3 SV=3)

HSP 1 Score: 157.918 bits (398), Expect = 6.401e-38
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_PEA (Histone H4 OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 6.401e-38
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_MAIZE (Histone H4 OS=Zea mays GN=H4C7 PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 6.401e-38
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_LOLTE (Histone H4 OS=Lolium temulentum PE=3 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 6.401e-38
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_FLATR (Histone H4 OS=Flaveria trinervia GN=hh4 PE=3 SV=3)

HSP 1 Score: 157.918 bits (398), Expect = 6.401e-38
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_EUCGL (Histone H4 OS=Eucalyptus globulus PE=3 SV=3)

HSP 1 Score: 157.918 bits (398), Expect = 6.401e-38
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_CHEMJ (Histone H4 OS=Chelidonium majus PE=3 SV=3)

HSP 1 Score: 157.918 bits (398), Expect = 6.401e-38
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_ARATH (Histone H4 OS=Arabidopsis thaliana GN=At1g07660 PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 6.401e-38
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H42_WHEAT (Histone H4 variant TH091 OS=Triticum aestivum PE=3 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 6.401e-38
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H41_WHEAT (Histone H4 variant TH011 OS=Triticum aestivum PE=3 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 6.401e-38
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 101
The following BLAST results are available for this feature:
BLAST of EY756440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
H4_SILLA6.401e-38100.00Histone H4 OS=Silene latifolia GN=SlH4 PE=3 SV=3[more]
H4_PEA6.401e-38100.00Histone H4 OS=Pisum sativum PE=1 SV=2[more]
H4_MAIZE6.401e-38100.00Histone H4 OS=Zea mays GN=H4C7 PE=1 SV=2[more]
H4_LOLTE6.401e-38100.00Histone H4 OS=Lolium temulentum PE=3 SV=2[more]
H4_FLATR6.401e-38100.00Histone H4 OS=Flaveria trinervia GN=hh4 PE=3 SV=3[more]
H4_EUCGL6.401e-38100.00Histone H4 OS=Eucalyptus globulus PE=3 SV=3[more]
H4_CHEMJ6.401e-38100.00Histone H4 OS=Chelidonium majus PE=3 SV=3[more]
H4_ARATH6.401e-38100.00Histone H4 OS=Arabidopsis thaliana GN=At1g07660 PE... [more]
H42_WHEAT6.401e-38100.00Histone H4 variant TH091 OS=Triticum aestivum PE=3... [more]
H41_WHEAT6.401e-38100.00Histone H4 variant TH011 OS=Triticum aestivum PE=3... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-008-F05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756440 ID=EY756440; Name=EY756440; organism=Citrus sinensis; type=EST; length=836bp
CCACGCGTCCGAGCAAATAAAAGAAGCATAAAATTAAAGAACTGAAAAGA
GAGAAAAGGAAAGCAGAAGAGAAATGTCAGGAAGAGGAAAGGGAGGCAAA
GGATTAGGAAAGGGAGGAGCGAAGAGGCACCGCAAGGTGCTGAGGGATAA
CATTCAGGGGATCACAAAGCCGGCTATCCGGCGGCTGGCGAGGCGTGGCG
GAGTCAAGCGTATCAGCGGTCTGATTTACGAGGAGACTCGCGGGGTTTTA
AAGATCTTTTTGGAGAACGTGATTCGTGATGCTGTGACTTACACTGAGCA
CGCTCGTCGTAAGACTGTCACCGCCATGGATGTTGTTTATGCTTTGAAGA
GGCAGGGCAGGACCCTTTACGGTTTTCGGTGGGTAATTTAAGGNTTTCTT
AATTTTTATGTTTTGAATGCTTATGGAGATCTGATGACTTTGGAATTTGG
GATGAAATTTGGCCTTCAAAGGAATTTTATGTTAATGTTGCTAAANNAAA
AANNANNANAAAANAAANNNNNAANNNNNGGGGGGGGGCCGCTTCAAAGA
GACCAACTTTACTACGGGGGGTGGGGAACGATAAATCTTTCAAAAGGGGC
CCAAATTTAATTCTGGGGGGGCGGTTTTAAAAGCGGGGGATGGGAGAACC
CGGGGGGTCACCCATTTAATCCCTTGGGGCACACCCCCTTTTCCCCGGGG
GGGGAAAAAAAAAAAGAGCCCCCCCAATTCCCCCCTTCAAAAATGGGCCC
CCTTAGGGGAGAAGAGGCGCCCCCTTTGGGGGGATTATTTAAGGGGGGGG
GGGGGGGTTCCCCCGGGGCCCCTCCCCTCCCTCCCC
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