EY756436

Overview
NameEY756436
Unique NameEY756436
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length496
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3393 contig Csv1_Contig3393:1505..2000. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756436 vs. ExPASy Swiss-Prot
Match: NAT6_ARATH (Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 1.856e-32
Identity = 62/69 (89.86%), Postives = 65/69 (94.20%), Query Frame = 3
Query:   21 LVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV 227
            +VNVPFSSEPFVAG VAFFLDNTLHKKD  +RKDRG+HWWDKF SFKGDTRSEEFYSLPFNLNKYFPSV
Sbjct:  464 MVNVPFSSEPFVAGSVAFFLDNTLHKKDSSIRKDRGKHWWDKFRSFKGDTRSEEFYSLPFNLNKYFPSV 532          
BLAST of EY756436 vs. ExPASy Swiss-Prot
Match: NAT5_ARATH (Nucleobase-ascorbate transporter 5 OS=Arabidopsis thaliana GN=NAT5 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.471e-29
Identity = 53/69 (76.81%), Postives = 62/69 (89.86%), Query Frame = 3
Query:   21 LVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV 227
            +VNVPFSS+ FV GCVA+ LD TLHKKDG +RKDRG+HWWD+FW+FK D R+EEFY+LPFNLNKYFPSV
Sbjct:  460 MVNVPFSSKAFVGGCVAYLLDTTLHKKDGSIRKDRGKHWWDRFWTFKNDPRTEEFYALPFNLNKYFPSV 528          
BLAST of EY756436 vs. ExPASy Swiss-Prot
Match: NAT7_ARATH (Nucleobase-ascorbate transporter 7 OS=Arabidopsis thaliana GN=NAT7 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 4.896e-25
Identity = 51/69 (73.91%), Postives = 57/69 (82.61%), Query Frame = 3
Query:   21 LVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV 227
            ++NVPFSS+ FVAG +AFFLD T+  KD   RKDRG  WWD+F SFK DTRSEEFYSLPFNLNKYFPSV
Sbjct:  470 MINVPFSSKAFVAGILAFFLDVTMSSKDSATRKDRGMFWWDRFMSFKSDTRSEEFYSLPFNLNKYFPSV 538          
BLAST of EY756436 vs. ExPASy Swiss-Prot
Match: NAT8_ARATH (Nucleobase-ascorbate transporter 8 OS=Arabidopsis thaliana GN=NAT8 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 2.780e-20
Identity = 44/68 (64.71%), Postives = 53/68 (77.94%), Query Frame = 3
Query:   21 LVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPS 224
            ++NVPFSS+ FV+G +AFFLD TL  KD   +KDRG  WW +F SF+ D RSEEFYSLP NL+KYFPS
Sbjct:  471 IINVPFSSKAFVSGILAFFLDTTLPPKDKTTKKDRGLVWWKRFKSFQSDNRSEEFYSLPLNLSKYFPS 538          
BLAST of EY756436 vs. ExPASy Swiss-Prot
Match: NAT2_ARATH (Nucleobase-ascorbate transporter 2 OS=Arabidopsis thaliana GN=NAT2 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 2.693e-15
Identity = 39/66 (59.09%), Postives = 48/66 (72.73%), Query Frame = 3
Query:   24 VNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFP 221
            +N  F S P VA  VA FLDNTL  K+    +DRG  WW KF +FKGD+R+EEFY+LPFNLN++FP
Sbjct:  459 LNTIFLSSPMVALMVAVFLDNTLDYKE--TARDRGLPWWAKFRTFKGDSRNEEFYTLPFNLNRFFP 522          
BLAST of EY756436 vs. ExPASy Swiss-Prot
Match: LPE1_MAIZE (Nucleobase-ascorbate transporter LPE1 OS=Zea mays GN=LPE1 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 3.889e-14
Identity = 38/74 (51.35%), Postives = 50/74 (67.57%), Query Frame = 3
Query:    6 VRVHYLVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV 227
            V  + +VNV FSS   VA  +A+ LD T    +  V+KDRG  WW+KF S+K D RSEEFY LP+ L++YFPS+
Sbjct:  454 VAFNVMVNVIFSSPATVAAILAYLLDCTHLYWEASVKKDRGWFWWEKFKSYKYDGRSEEFYRLPYGLSRYFPSL 527          
BLAST of EY756436 vs. ExPASy Swiss-Prot
Match: NAT4_ARATH (Nucleobase-ascorbate transporter 4 OS=Arabidopsis thaliana GN=NAT4 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 1.478e-13
Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 3
Query:   21 LVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPS 224
            ++ V FSS   V    AF LD T       VR+D GRHWW+KF  +  DTR+EEFY+LP+NLN++FPS
Sbjct:  458 IMQVIFSSAATVGIMAAFLLDCTHSYGHASVRRDSGRHWWEKFRVYHTDTRTEEFYALPYNLNRFFPS 525          
BLAST of EY756436 vs. ExPASy Swiss-Prot
Match: NAT1_ARATH (Nucleobase-ascorbate transporter 1 OS=Arabidopsis thaliana GN=NAT1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.251e-12
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 3
Query:   24 VNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFP 221
            +N  F S   V   +A F+DNT+  +  + +KDRG  WW KF +F+GD R+EEFY+LPFNLN++FP
Sbjct:  455 LNTLFMSPATVGLIIAVFMDNTMEVE--RSKKDRGMPWWVKFRTFRGDNRNEEFYTLPFNLNRFFP 518          
BLAST of EY756436 vs. ExPASy Swiss-Prot
Match: NAT10_ARATH (Putative nucleobase-ascorbate transporter 10 OS=Arabidopsis thaliana GN=NAT10 PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 4.024e-11
Identity = 31/68 (45.59%), Postives = 41/68 (60.29%), Query Frame = 3
Query:   21 LVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPS 224
            ++ V F S   VA  +A  LD TL +   + +KD G  WWDKF  +  D R++EFY LP  LNK+FPS
Sbjct:  473 MIRVIFMSHTTVAAIIAIVLDCTLCRDSDEAKKDCGMKWWDKFRLYNLDVRNDEFYGLPCRLNKFFPS 540          
The following BLAST results are available for this feature:
BLAST of EY756436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
NAT6_ARATH1.856e-3289.86Nucleobase-ascorbate transporter 6 OS=Arabidopsis ... [more]
NAT5_ARATH1.471e-2976.81Nucleobase-ascorbate transporter 5 OS=Arabidopsis ... [more]
NAT7_ARATH4.896e-2573.91Nucleobase-ascorbate transporter 7 OS=Arabidopsis ... [more]
NAT8_ARATH2.780e-2064.71Nucleobase-ascorbate transporter 8 OS=Arabidopsis ... [more]
NAT2_ARATH2.693e-1559.09Nucleobase-ascorbate transporter 2 OS=Arabidopsis ... [more]
LPE1_MAIZE3.889e-1451.35Nucleobase-ascorbate transporter LPE1 OS=Zea mays ... [more]
NAT4_ARATH1.478e-1351.47Nucleobase-ascorbate transporter 4 OS=Arabidopsis ... [more]
NAT1_ARATH1.251e-1250.00Nucleobase-ascorbate transporter 1 OS=Arabidopsis ... [more]
NAT10_ARATH4.024e-1145.59Putative nucleobase-ascorbate transporter 10 OS=Ar... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-008-E11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756436 ID=EY756436; Name=EY756436; organism=Citrus sinensis; type=EST; length=496bp
CCCGCGTCCGGGTTCACTATCTGGTAAACGTTCCTTTCTCCTCAGAACCA
TTTGTTGCTGGTTGTGTGGCATTTTTCCTTGACAACACACTGCATAAAAA
GGATGGTCAAGTCAGGAAAGACAGGGGTAGGCATTGGTGGGACAAGTTCT
GGTCCTTCAAAGGCGACACAAGAAGTGAAGAATTTTACTCCCTGCCCTTC
AATTTAAACAAATATTTCCCATCTGTGTGATTCAATCGGTAACATGTATT
TCTCTTTGGGAAGTTTTCCAAAAGTCCTTGTGGGAACACACAAAATATCA
TCATTGCTCTCTTGTGAATCTCTTATTACACGCTATAGCAGTAAAAGATA
GTACCTTCCTTTATAGGATGTGCCTTAGAGCATTTGTTGAACTGTTTTTT
TCTTTTCTGTAAATCCAACCGGAGACTGATGGATTCGAAGTAGCAATGAA
GCAATTATATTTGCTTTTTCTTCAAAAAAAAAAAAAAAAAAAAAAA
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