EY756393

Overview
NameEY756393
Unique NameEY756393
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length544
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13326 contig Csv1_Contig13326:1..544. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756393 vs. ExPASy Swiss-Prot
Match: FKB70_WHEAT (70 kDa peptidyl-prolyl isomerase OS=Triticum aestivum GN=FKBP70 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.204e-12
Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 2
Query:   14 RAHVYMEIADLILAELDIKKAIEADPQNREVXXXXXXXXXXXAESNKRDAKFYANMFARVTKDSSVATK 220
            RA  Y ++ADL LAE+DIKKA+E DP+NR+V            E NK+DAKFY+NMF+++TK S+  +K
Sbjct:  490 RAQAYTQLADLELAEVDIKKALEIDPENRDVKLTYKTLKEKIKEINKKDAKFYSNMFSKMTKPSAEESK 558          
BLAST of EY756393 vs. ExPASy Swiss-Prot
Match: FKB70_ARATH (70 kDa peptidyl-prolyl isomerase OS=Arabidopsis thaliana GN=ROF1 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 5.977e-12
Identity = 33/63 (52.38%), Postives = 43/63 (68.25%), Query Frame = 2
Query:   14 RAHVYMEIADLILAELDIKKAIEADPQNREVXXXXXXXXXXXAESNKRDAKFYANMFARVTKD 202
            RA  YME++DL LAE D+KKA+E DP NREV            E NK++AKFY NMFA+++K+
Sbjct:  489 RAQAYMELSDLDLAEFDVKKALEIDPNNREVKLEQKRLKEKMKEFNKKEAKFYGNMFAKLSKE 551          
The following BLAST results are available for this feature:
BLAST of EY756393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
FKB70_WHEAT1.204e-1250.7270 kDa peptidyl-prolyl isomerase OS=Triticum aesti... [more]
FKB70_ARATH5.977e-1252.3870 kDa peptidyl-prolyl isomerase OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-008-B02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756393 ID=EY756393; Name=EY756393; organism=Citrus sinensis; type=EST; length=544bp
CCACGCGTCCGGGAGAGCACATGTCTATATGGAGATTGCAGATCTGATCT
TGGCTGAATTGGACATCAAGAAAGCTATTGAGGCTGACCCCCAGAACAGG
GAGGTTAAGTTGCTGCAGAAATCATTGAAACAACTTCAAGCTGAGAGCAA
CAAGAGAGATGCAAAGTTCTATGCGAACATGTTTGCGCGCGTGACTAAGG
ACTCATCTGTGGCTACCAAGGTCGGTTATTTTGCGTGTGACTAAGGACTC
ATCTGTGGCTACCAAGAAGCTGAAAGTAGAGAAATCAGAGGAGGAGAAGA
GGCGGGAAGTTGCCGTGGCGATGGAAACAGAAAAGGAAGTTGATAGCTCA
GCTCCTCCTAAAGACGGAGTGGTTGTTGATTCATGTTAAATATATGTTTA
GGAAATATGTATAGTTGATGATCCCTGATAAAACCAAGAGGAGCAACGAA
TCAATCCACCGAGAAAAGTTCCGGCCTCGGGGGCCGATACTGCCTCCCTA
AATGTATCATATACAGAATTATTTTACAAAAAAAAAAAAAAAAA
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